Messages by Date
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2024/12/16
[Freesurfer] Single voxel grey-white matter boundary binary mask
Tamir Eisenstein
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2024/12/13
Re: [Freesurfer] [External] Re: FreeSurfer Labels Question
Barsotti, Ercole
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2024/12/13
Re: [Freesurfer] FreeSurfer Labels Question
Fischl, Bruce R.,PHD
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2024/12/13
[Freesurfer] FreeSurfer Labels Question
Barsotti, Ercole
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2024/12/13
[Freesurfer] Importing surface meshes from 3rd party cortical surface reconstruction tools for analysis in fsaverage template space
James Hengenius
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2024/12/13
Re: [Freesurfer] synthmorph for functional registration?
Fischl, Bruce R.,PHD
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2024/12/13
Re: [Freesurfer] Spiky Brains
Bos, M.G.N. (Marieke)
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2024/12/13
Re: [Freesurfer] synthmorph for functional registration?
Hoffmann, Malte,PhD
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2024/12/13
Re: [Freesurfer] needed: tools to work with synthmorph deformations in ANTS and FSL pipelines.
Hoffmann, Malte,PhD
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2024/12/12
[Freesurfer] synthmorph for functional registration?
Josh
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2024/12/12
Re: [Freesurfer] Spiky Brains
Douglas N. Greve
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2024/12/12
Re: [Freesurfer] Freesurfer v8.0.0 error
Douglas N. Greve
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2024/12/12
[Freesurfer] Spiky Brains
Bos, M.G.N. (Marieke)
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2024/12/11
[Freesurfer] needed: tools to work with synthmorph deformations in ANTS and FSL pipelines.
Josh
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2024/12/11
Re: [Freesurfer] Freesurfer v8.0.0 error
Huang, Yujing
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2024/12/11
Re: [Freesurfer] recon-all-clinical rh.BA_exvivio.annot error
Huang, Yujing
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2024/12/11
Re: [Freesurfer] recon-all-clinical rh.BA_exvivio.annot error
Huang, Yujing
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2024/12/11
[Freesurfer] Freesurfer v8.0.0 error
潘晨盛
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2024/12/11
Re: [Freesurfer] recon-all-clinical rh.BA_exvivio.annot error
Melissa Marie Rundle
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2024/12/11
[Freesurfer] recon-all-clinical rh.BA_exvivio.annot error
Melissa Marie Rundle
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2024/12/11
Re: [Freesurfer] Fwd: LME matrix design
Diers, Kersten /DZNE
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2024/12/10
Re: [Freesurfer] Petsurfer: PET -> MNI305 problem
Douglas N. Greve
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2024/12/10
Re: [Freesurfer] Error in longitudinal hippocampal fields
Mark Wagshul
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2024/12/10
Re: [Freesurfer] recon-all on poor MRI quality
Douglas N. Greve
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2024/12/10
Re: [Freesurfer] Questions about CVS registration
Douglas N. Greve
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2024/12/10
Re: [Freesurfer] Subject: query about mri_vol2surf
Douglas N. Greve
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2024/12/10
Re: [Freesurfer] Recon all across different image dimensions of different clinical subjects!
Douglas N. Greve
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2024/12/09
Re: [Freesurfer] Error in longitudinal hippocampal fields processing
Iglesias Gonzalez, Juan E.
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2024/12/09
Re: [Freesurfer] TRACULA error /bin/tcsh: bad interpreter: No such file or directory
fsbuild
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2024/12/09
[Freesurfer] TRACULA error /bin/tcsh: bad interpreter: No such file or directory
Barletta, Valeria
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2024/12/06
[Freesurfer] Subject: query about mri_vol2surf
Pandey, Shraddha
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2024/12/06
[Freesurfer] LME matrix design
Bondi, Daniel
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2024/12/06
[Freesurfer] Questions about CVS registration
Tanxin Dong
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2024/12/05
[Freesurfer] Recon all across different image dimensions of different clinical subjects!
JM
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2024/12/04
Re: [Freesurfer] TRACULA exited with ERROR /home/vbarletta/ants-2.5.4/bin/antsRegistrationSyNQuick.sh: Permission denied.
fsbuild
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2024/12/04
[Freesurfer] TRACULA exited with ERROR /home/vbarletta/ants-2.5.4/bin/antsRegistrationSyNQuick.sh: Permission denied.
Barletta, Valeria
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2024/12/04
Re: [Freesurfer] use and registration of FLAIR in recon-all and segmentHA
Simone Cauzzo
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2024/12/04
Re: [Freesurfer] mri_coreg threads parallel processing clarification
Hemond, Christopher
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2024/12/03
Re: [Freesurfer] mri_coreg threads parallel processing clarification
Hemond, Christopher
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2024/12/03
Re: [Freesurfer] surfreg error: typo in mris_convert command
Huang, Yujing
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2024/12/03
[Freesurfer] errore with tracula: eddy_openmp: Command not found.
Barletta, Valeria
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2024/12/03
[Freesurfer] surfreg error: typo in mris_convert command
Suzanne Witt
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2024/12/03
[Freesurfer] trac-all -prep EDDY Unrealistic read-out time
ADRIANA LUCIA RUIZ RIZZO
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2024/12/02
Re: [Freesurfer] Take screenshot via sbatch without launching GUI
Douglas N. Greve
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2024/12/02
[Freesurfer] Take screenshot via sbatch without launching GUI
Blujus, Jenna
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2024/12/02
Re: [Freesurfer] Fwd: recon-all command stuck before creating pial files
Fischl, Bruce R.,PHD
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2024/12/02
Re: [Freesurfer] Fwd: recon-all command stuck before creating pial files
chemda wiener
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2024/12/01
[Freesurfer] unsubscrube
Daria Sharapova
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2024/12/01
Re: [Freesurfer] Merging aparc+aseg and ThalamicNuclei
Douglas N. Greve
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2024/12/01
Re: [Freesurfer] Pipeline for Transferring VBM Outputs to FreeSurfer and Parcellating with the Destrieux Atlas
Douglas N. Greve
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2024/12/01
Re: [Freesurfer] FDG Pet: How do I create an 'SUVR Image'?
Douglas N. Greve
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2024/12/01
Re: [Freesurfer] Recon-all failing
Douglas N. Greve
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2024/12/01
Re: [Freesurfer] mri_coreg threads parallel processing clarification
Douglas N. Greve
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2024/12/01
Re: [Freesurfer] FS version 8-beta
Douglas N. Greve
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2024/12/01
Re: [Freesurfer] Fwd: recon-all command stuck before creating pial files
Fischl, Bruce R.,PHD
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2024/12/01
Re: [Freesurfer] recon-all command stuck before creating pial files
fsbuild
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2024/12/01
[Freesurfer] Fwd: recon-all command stuck before creating pial files
chemda wiener
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2024/11/27
[Freesurfer] Merging aparc+aseg and ThalamicNuclei
Andrew M
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2024/11/27
[Freesurfer] Pipeline for Transferring VBM Outputs to FreeSurfer and Parcellating with the Destrieux Atlas
Safari, Nooshin (rvz7wf)
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2024/11/26
[Freesurfer] FDG Pet: How do I create an 'SUVR Image'?
Lai, Ian M.
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2024/11/26
[Freesurfer] Recon-all failing
Mark Wagshul
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2024/11/26
Re: [Freesurfer] Questions on Using recon-all-clinical for Cortical Thickness Analysis
Gopinath, Karthik
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2024/11/26
[Freesurfer] Questions on Using recon-all-clinical for Cortical Thickness Analysis
王又劼
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2024/11/25
[Freesurfer] mri_coreg threads parallel processing clarification
Hemond, Christopher
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2024/11/25
Re: [Freesurfer] FS version 8-beta
Martin Kavec
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2024/11/23
Re: [Freesurfer] update from 7.1 to 7.4
Douglas N. Greve
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2024/11/22
[Freesurfer] update from 7.1 to 7.4
Eszter Boros
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2024/11/22
Re: [Freesurfer] mri_glmfit error:ill-conditioned matrix
Douglas N. Greve
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2024/11/21
[Freesurfer] Question About Longitudinal TRACULA Analysis
De Giorgi, Sara
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2024/11/21
[Freesurfer] Longitudinal processing including infant data
Hendrikse, Chanelle [cbuc...@sun.ac.za]
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2024/11/20
Re: [Freesurfer] Longitudinal FS Processing
Wighton, Paul
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2024/11/20
[Freesurfer] Longitudinal FS Processing
Yingling, Michael
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2024/11/20
Re: [Freesurfer] mri_vol2surf error: GM estimation couldn't find enough samples
Douglas N. Greve
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2024/11/20
Re: [Freesurfer] Help with mri_vol2surf incorrect surface generation
Douglas N. Greve
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2024/11/20
Re: [Freesurfer] mri_coreg error: could not open brainmask.mgz file to register PET image with anatomical
Douglas N. Greve
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2024/11/20
[Freesurfer] RE: 回复:How to interpret the vertex-wise area metric?
Fischl, Bruce R.,PHD
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2024/11/19
[Freesurfer] 回复:How to interpret the vertex-wise area metric?
Alex
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2024/11/19
[Freesurfer] Synthmorph Deformations -Separating Components of Transforms
Josh Lee
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2024/11/18
Re: [Freesurfer] Freesurfer tutorial troubles
fsbuild
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2024/11/18
[Freesurfer] Freesurfer tutorial troubles
Marcin Stański
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2024/11/18
Re: [Freesurfer] [EXT] Re: Synthstrip error in FS v. 8.0.0 beta
Raikes, Adam C - (adamraikes)
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2024/11/18
Re: [Freesurfer] Synthstrip error in FS v. 8.0.0 beta
fsbuild
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2024/11/15
[Freesurfer] Help with mri_vol2surf incorrect surface generation
Pandey, Shraddha
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2024/11/15
[Freesurfer] NIH R25 Course : Training in Advanced Statistical Methods in Neuroimaging and Genetics, Salt Lake City, Utah, April 7-18, 2025.
ROBERT CARY WELSH
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2024/11/15
Re: [Freesurfer] mri_label2label
王又劼
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2024/11/14
Re: [Freesurfer] mri_convert: Command terminated by signal 9
fsbuild
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2024/11/14
Re: [Freesurfer] mri_convert: Command terminated by signal 9
Jeffrey Neal
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2024/11/14
Re: [Freesurfer] mri_vol2surf error: GM estimation couldn't find enough samples
Lee, Hansol
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2024/11/14
Re: [Freesurfer] Appropriate image for texture/intensity based analysis
Sandhitsu Das
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2024/11/12
Re: [Freesurfer] mri_synthseg on Mac M3
fsbuild
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2024/11/12
[Freesurfer] How to interpret the vertex-wise area metric?
Alex
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2024/11/12
Re: [Freesurfer] use and registration of FLAIR in recon-all and segmentHA (@Eugenio)
Douglas N. Greve
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2024/11/12
Re: [Freesurfer] Resampling FLAIR images with anisotropic voxels
Douglas N. Greve
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2024/11/12
Re: [Freesurfer] Appropriate image for texture/intensity based analysis
Douglas N. Greve
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2024/11/12
Re: [Freesurfer] mri_vol2surf error: GM estimation couldn't find enough samples
Douglas N. Greve
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2024/11/12
Re: [Freesurfer] mri_label2label
Douglas N. Greve
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2024/11/12
Re: [Freesurfer] aparcstats2table & asegstats2table version differences
Douglas N. Greve
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2024/11/12
Re: [Freesurfer] FS version 8-beta
Douglas N. Greve
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2024/11/12
[Freesurfer] FS 8-beta bug report
Douglas N. Greve
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2024/11/12
[Freesurfer] mri_synthseg on Mac M3
Tom Kirk
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2024/11/12
[Freesurfer] Systematic difference in volume between baseline and longitudinal pipelines
Sandhitsu Das
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2024/11/12
[Freesurfer] use and registration of FLAIR in recon-all and segmentHA
Simone Cauzzo
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2024/11/12
Re: [Freesurfer] Resampling FLAIR images with anisotropic voxels
Koen Van Leemput
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2024/11/11
[Freesurfer] Appropriate image for texture/intensity based analysis
Sandhitsu Das
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2024/11/11
Re: [Freesurfer] mri_convert: Command terminated by signal 9
Huang, Yujing
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2024/11/11
Re: [Freesurfer] mri_label2label
fsbuild
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2024/11/11
[Freesurfer] mri_vol2surf error: GM estimation couldn't find enough samples
Lee, Hansol
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2024/11/11
Re: [Freesurfer] mri_convert: Command terminated by signal 9
Jeffrey Neal
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2024/11/11
Re: [Freesurfer] mri_convert: Command terminated by signal 9
fsbuild
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2024/11/11
Re: [Freesurfer] Fwd: recon all data for classification between groups !
Wighton, Paul
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2024/11/09
[Freesurfer] Fwd: recon all data for classification between groups !
JM
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2024/11/08
Re: [Freesurfer] NextBrain - CUDA out of memory error
Iglesias Gonzalez, Juan E.
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2024/11/08
Re: [Freesurfer] FS version 8-beta
Martin Kavec
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2024/11/08
Re: [Freesurfer] FS version 8-beta
Hoffmann, Malte,PhD
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2024/11/08
Re: [Freesurfer] FS version 8-beta
Martin Kavec
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2024/11/08
[Freesurfer] MD5 mismatch on one release
ali rahimi
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2024/11/07
[Freesurfer] NextBrain - CUDA out of memory error
Boa Sorte Silva, Narlon
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2024/11/07
[Freesurfer] aparcstats2table & asegstats2table version differences
Heffernan, Zachary
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2024/11/07
Re: [Freesurfer] FS version 8-beta
Aaron Tanenbaum
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2024/11/07
Re: [Freesurfer] Synthstrip error in FS v. 8.0.0 beta
Aaron Tanenbaum
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2024/11/07
Re: [Freesurfer] PVC on DCE MRI
Douglas N. Greve
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2024/11/07
Re: [Freesurfer] mri_glmfit-sim Error for Custom Threshold
Douglas N. Greve
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2024/11/07
Re: [Freesurfer] glmfit-sim question
Douglas N. Greve
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2024/11/07
[Freesurfer] FS version 8-beta
Douglas N. Greve
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2024/11/06
Re: [Freesurfer] [WARNING: ATTACHMENT UNSCANNED]Re: mri_convert: Command terminated by signal 9
Huang, Yujing
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2024/11/06
[Freesurfer] [WARNING: ATTACHMENT UNSCANNED]Re: mri_convert: Command terminated by signal 9
Jeffrey Neal
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2024/11/06
[Freesurfer] Synthstrip error in FS v. 8.0.0 beta
Raikes, Adam C - (adamraikes)
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2024/10/30
[Freesurfer] glmfit-sim question
보건과학대학 의공학부
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2024/10/30
Re: [Freesurfer] recon-all-clinical output brainvol.stats vs synthseg.vol.csv
Melissa Marie Rundle
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2024/10/30
Re: [Freesurfer] recon-all-clinical output brainvol.stats vs synthseg.vol.csv
Iglesias Gonzalez, Juan E.
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2024/10/30
Re: [Freesurfer] recon-all-clinical output brainvol.stats vs synthseg.vol.csv
Melissa Marie Rundle
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2024/10/30
[Freesurfer] recon all data for classification between groups !
JM
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2024/10/29
Re: [Freesurfer] Error During T2/FLAIR Pial Surface Refinement
Glasser, Matthew
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2024/10/29
Re: [Freesurfer] Error During T2/FLAIR Pial Surface Refinement
Thomas Kaufmann
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2024/10/25
Re: [Freesurfer] PVC on DCE MRI
Shen, Qian
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2024/10/25
[Freesurfer] mri_glmfit-sim Error for Custom Threshold
Sujeevini Sujanthan
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2024/10/24
Re: [Freesurfer] infantFS: expected outputs
Zoellner, Frank
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2024/10/23
Re: [Freesurfer] infantFS: expected outputs
Zollei, Lilla,Ph.D.
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2024/10/23
[Freesurfer] Extracting generic gradient vector
Ashwati Vipin (Dr)
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2024/10/22
Re: [Freesurfer] mri_synthmorph regularisation
Simon Jones
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2024/10/22
[Freesurfer] Issue with Talairach_avi Command in FreeSurfer
parisa sehati
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2024/10/21
Re: [Freesurfer] Development version M1 mac error
fsbuild
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2024/10/21
[Freesurfer] Resampling FLAIR images with anisotropic voxels
Jin Liu
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2024/10/21
[Freesurfer] Development version M1 mac error
Jasmine Cakmak
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2024/10/21
[Freesurfer] mri_glmfit error:ill-conditioned matrix
Chen Yang
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2024/10/21
Re: [Freesurfer] mri_synthmorph regularisation
Hoffmann, Malte,PhD
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2024/10/21
[Freesurfer] mri_synthmorph regularisation
Simon Jones
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2024/10/21
Re: [Freesurfer] lost volume geometry information using read_surf.m and write_surf.m
Fischl, Bruce R.,PHD
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2024/10/21
Re: [Freesurfer] lost volume geometry information using read_surf.m and write_surf.m
Yujia Huang
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2024/10/18
Re: [Freesurfer] lost volume geometry information using read_surf.m and write_surf.m
Fischl, Bruce R.,PHD
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2024/10/18
[Freesurfer] lost volume geometry information using read_surf.m and write_surf.m
Yujia Huang
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2024/10/17
[Freesurfer] Using Freesurfer for Volume Analysis with Destrieux and aseg Atlases
Safari, Nooshin (rvz7wf)
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2024/10/14
[Freesurfer] Obtaining eTIV/ICV value after recon-any processing
Mahir Khan
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2024/10/14
[Freesurfer] Hardware selection for utmost performance of Freesurfer
Jin Liu
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2024/10/14
Re: [Freesurfer] [WARNING: ATTACHMENT UNSCANNED]Issue with WM surface fill
Fischl, Bruce R.,PHD
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2024/10/13
Re: [Freesurfer] [WARNING: ATTACHMENT UNSCANNED]Issue with WM surface fill
Bronwyn Overs
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2024/10/11
[Freesurfer] mri_segstats for lobar intensity values
Julie Ottoy
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2024/10/11
Re: [Freesurfer] Error while opening Freeview on Linux
fsbuild
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2024/10/11
Re: [Freesurfer] Difficulty with downloading Tensorflow and using with SynthSeg
fsbuild
-
2024/10/11
[Freesurfer] Error while opening Freeview on Linux
Harsh Srivastava
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2024/10/11
[Freesurfer] NIH R25 Course : Training in Advanced Statistical Methods in Neuroimaging and Genetics, Salt Lake City, Utah, April 7-18, 2025.
ROBERT CARY WELSH
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2024/10/11
Re: [Freesurfer] [WARNING: ATTACHMENT UNSCANNED]Issue with WM surface fill
Fischl, Bruce R.,PHD
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2024/10/10
Re: [Freesurfer] mri_glmfit error: matrix is rank-deficient by 18
Shawn Flanagan
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2024/10/09
Re: [Freesurfer] Error During T2/FLAIR Pial Surface Refinement
Fischl, Bruce R.,PHD
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2024/10/09
[Freesurfer] Error During T2/FLAIR Pial Surface Refinement
Thomas Kaufmann
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2024/10/09
Re: [Freesurfer] FreeSurfer - extract rigid parameters from .lta file
fsbuild
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2024/10/09
Re: [Freesurfer] FreeSurfer - extract rigid parameters from .lta file
Hoffmann, Malte,PhD
-
2024/10/09
Re: [Freesurfer] FreeSurfer - extract rigid parameters from .lta file
Hoffmann, Malte,PhD
-
2024/10/09
Re: [Freesurfer] FreeSurfer - extract rigid parameters from .lta file
noga.ker...@campus.technion.ac.il
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2024/10/08
Re: [Freesurfer] error: Bad CPU type in executable WMH FreeSurfer
fsbuild
-
2024/10/08
Re: [Freesurfer] Freeview error with QT
fsbuild
-
2024/10/08
[Freesurfer] PVC on DCE MRI
Shen, Qian
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2024/10/08
Re: [Freesurfer] FreeSurfer - extract rigid parameters from .lta file
Hoffmann, Malte,PhD
-
2024/10/08
[Freesurfer] Bigventricles segmentation
Goodheart, Anna E.,MD, MSC
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2024/10/08
[Freesurfer] NIH funded postdoc position at Child Mind Institute
Ting Xu
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2024/10/08
Re: [Freesurfer] FreeSurfer - extract rigid parameters from .lta file
noga.ker...@campus.technion.ac.il
-
2024/10/07
Re: [Freesurfer] error: Bad CPU type in executable WMH FreeSurfer
fsbuild
-
2024/10/07
Re: [Freesurfer] mri_WMHsynthseg error: Killed 9
Johnson, Ian
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2024/10/07
Re: [Freesurfer] mri_WMHsynthseg error: Killed 9
Johnson, Ian
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2024/10/07
Re: [Freesurfer] mri_WMHsynthseg error: Killed 9
Iglesias Gonzalez, Juan E.
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2024/10/07
Re: [Freesurfer] error: Bad CPU type in executable WMH FreeSurfer
Johnson, Ian
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2024/10/07
Re: [Freesurfer] error: Bad CPU type in executable WMH FreeSurfer
fsbuild
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2024/10/07
[Freesurfer] error: Bad CPU type in executable WMH FreeSurfer
Johnson, Ian
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2024/10/07
[Freesurfer] mri_WMHsynthseg error: Killed 9
Johnson, Ian
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2024/10/07
Re: [Freesurfer] tkmedit does not start
Fischl, Bruce R.,PHD
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2024/10/07
[Freesurfer] tkmedit does not start
Francesco Lomi
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2024/10/05
Re: [Freesurfer] mri_glmfit error: matrix is rank-deficient by 18
fsbuild
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2024/10/05
Re: [Freesurfer] Freesurfer stopped working after updating to Ubunto 24.04.1 LTS
fsbuild
-
2024/10/05
[Freesurfer] Freesurfer stopped working after updating to Ubunto 24.04.1 LTS
Raj Agarbattiwala
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2024/10/04
[Freesurfer] mri_glmfit error: matrix is rank-deficient by 18
Shawn Flanagan
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2024/10/01
[Freesurfer] Hybrid combination
Maja Nikolova
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2024/10/01
Re: [Freesurfer] PetSurfer, PVC uptake of ROI relative to Pons
Wighton, Paul
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2024/10/01
Re: [Freesurfer] FreeSurfer - extract rigid parameters from .lta file
noga.ker...@campus.technion.ac.il
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2024/10/01
Re: [Freesurfer] petsurfer using brainstem subfields
Sneha Pandya
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2024/10/01
[Freesurfer] PetSurfer, PVC uptake of ROI relative to Pons
zeno Zeng
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2024/10/01
[Freesurfer] PhD position available/sensory thalamus/developmental dyslexia
Katharina von Kriegstein
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2024/10/01
Re: [Freesurfer] FreeSurfer - extract rigid parameters from .lta file
Douglas N. Greve
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2024/09/30
[Freesurfer] BEDPOSTX Tracula Error
Daniel Salinas
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2024/09/30
Re: [Freesurfer] Repost: NextBrain Segmentation PyTorch-GPU Compatibility Error
Nolan, Jackson
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2024/09/30
Re: [Freesurfer] Efficient printing of freeview screenshots through freeview [HPC]
Wang, Ruopeng