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• [Freesurfer] Updates/bug fixes available for the 8.0.0 release fsbuild
  • Re: [Freesurfer] Updates/bug fixes available for the 8.0.0 release fsbuild
• [Freesurfer] Feasibility and Accuracy of Using SAMSEG with ADC Maps Taghizadeh Mortezaei, Nima
• [Freesurfer] Hypothalamic subunits segmentation yields different results in versions 7.2.0 and 7.4.1 Maria Paternina Die
• [Freesurfer] FreeSurfer 8 on Ubuntu 24.04 Nagesh Adluru
  • Re: [Freesurfer] FreeSurfer 8 on Ubuntu 24.04 fsbuild
• [Freesurfer] nu_correct error: Can't locate Sys/Hostname.pm in @INC Billah, Tashrif
  • Re: [Freesurfer] nu_correct error: Can't locate Sys/Hostname.pm in @INC fsbuild
  • Re: [Freesurfer] nu_correct error: Can't locate Sys/Hostname.pm in @INC fsbuild
  • Re: [Freesurfer] nu_correct error: Can't locate Sys/Hostname.pm in @INC Billah, Tashrif
  • Re: [Freesurfer] nu_correct error: Can't locate Sys/Hostname.pm in @INC Billah, Tashrif
  • Re: [Freesurfer] nu_correct error: Can't locate Sys/Hostname.pm in @INC Billah, Tashrif
  • Re: [Freesurfer] nu_correct error: Can't locate Sys/Hostname.pm in @INC fsbuild
  • Re: [Freesurfer] nu_correct error: Can't locate Sys/Hostname.pm in @INC Billah, Tashrif
• [Freesurfer] Search the archives link is not working Billah, Tashrif
  • Re: [Freesurfer] Search the archives link is not working fsbuild
• [Freesurfer] license.txt Mohammed Hassan ALMorabet
  • Re: [Freesurfer] license.txt Wighton, Paul
• [Freesurfer] samseg: erroneous lesion labels on T2 red nucleus set to zero Simone Cauzzo
  • [Freesurfer] samseg: erroneous lesion labels on T2 red nucleus set to zero Simone Cauzzo
• [Freesurfer] synthstrip use as a Docker for all MRI files in directory Sanchez Fernandez, Ivan
  • Re: [Freesurfer] synthstrip use as a Docker for all MRI files in directory Hoffmann, Malte,PhD
• [Freesurfer] LME ROI group analysis Bondi, Daniel
• [Freesurfer] Guidance on SegmentHA with Low-Res MRI Taghizadeh Mortezaei, Nima
  • Re: [Freesurfer] Guidance on SegmentHA with Low-Res MRI Iglesias Gonzalez, Juan E.
• Re: [Freesurfer] synthstrip use as a Docker for all MRI files in directory fsbuild
• [Freesurfer] Freesurfer 7.4.0 not working in Ubuntu 24.04 vittal korann
  • Re: [Freesurfer] Freesurfer 7.4.0 not working in Ubuntu 24.04 fsbuild
• [Freesurfer] cvs register error Xuesong Su
  • Re: [Freesurfer] cvs register error Zollei, Lilla,Ph.D.
• [Freesurfer] freesurfer 8 Gregory Book
  • Re: [Freesurfer] freesurfer 8 fsbuild
• [Freesurfer] FS8.0 Patch - Next Step Clarification Carly McIntyre-Wood
  • Re: [Freesurfer] FS8.0 Patch - Next Step Clarification Huang, Yujing
• [Freesurfer] Issue with recon-all Bedard, Patrick (NIH/NINDS) [C]
  • Re: [Freesurfer] Issue with recon-all fsbuild
• [Freesurfer] mris_register external atlas Stefanie Bradley
  • Re: [Freesurfer] mris_register external atlas Fischl, Bruce R.,PHD
  • Re: [Freesurfer] mris_register external atlas Stefanie Bradley
  • Re: [Freesurfer] mris_register external atlas Zollei, Lilla,Ph.D.
  • Re: [Freesurfer] mris_register external atlas Stefanie Bradley
  • Re: [Freesurfer] mris_register external atlas Fischl, Bruce R.,PHD
  • Re: [Freesurfer] mris_register external atlas Stefanie Bradley
  • Re: [Freesurfer] mris_register external atlas Fischl, Bruce R.,PHD
  • Re: [Freesurfer] mris_register external atlas Stefanie Bradley
  • Re: [Freesurfer] mris_register external atlas Fischl, Bruce R.,PHD
  • Re: [Freesurfer] mris_register external atlas Douglas N. Greve
• [Freesurfer] trac-all -bedpostx error Gabriella Monopoli
• [Freesurfer] samseg: unrecognized flag with --lesion-mask-pattern Simone Cauzzo
  • Re: [Freesurfer] samseg: unrecognized flag with --lesion-mask-pattern Koen Van Leemput
• [Freesurfer] trac-preproc: orientLAS and mri_info issue with unsigned shorts Mirro, Amy
  • Re: [Freesurfer] trac-preproc: orientLAS and mri_info issue with unsigned shorts Mirro, Amy
• [Freesurfer] Problem with aparcstats2table Rosalia Dacosta Aguayo
  • Re: [Freesurfer] Problem with aparcstats2table Rosalia Dacosta Aguayo
• [Freesurfer] Recon-all using mni152 as template Davide Sabbadin
  • Re: [Freesurfer] Recon-all using mni152 as template Douglas N. Greve
  • Re: [Freesurfer] Recon-all using mni152 as template Davide Sabbadin
• [Freesurfer] thresholding advice for probabilistic subfield amygdala atlas in MNI 152 space Stephanie Williams
• [Freesurfer] Inquiry Regarding SynthSeg Volumetric Measurements ringki . siewert
• [Freesurfer] custom ROI as a reference region for PET Lauri Tuominen
  • Re: [Freesurfer] custom ROI as a reference region for PET Douglas N. Greve
• [Freesurfer] 怎么取消 yaoshanwen2022
• [Freesurfer] freesurfer course Sikah, Kevin (BIDMC - Neurology)
• [Freesurfer] Freeview Yoel HALIMI
  • Re: [Freesurfer] Freeview Wang, Ruopeng
  • Re: [Freesurfer] Freeview Yoel HALIMI
  • Re: [Freesurfer] Freeview Wang, Ruopeng
  • Re: [Freesurfer] Freeview fsbuild
  • Re: [Freesurfer] Freeview Yoel HALIMI
  • Re: [Freesurfer] Freeview Wang, Ruopeng
  • Re: [Freesurfer] Freeview Yoel HALIMI
• [Freesurfer] Cortex thickness Feruza Turdialieva
  • Re: [Freesurfer] Cortex thickness Fischl, Bruce R.,PHD
• [Freesurfer] Voxel editing Yoel HALIMI
  • Re: [Freesurfer] Voxel editing Yoel HALIMI
• [Freesurfer] Recon-all-clinical pipeline Lieshout, P.B. van (Pauline)
  • Re: [Freesurfer] Recon-all-clinical pipeline Iglesias Gonzalez, Juan E.
• [Freesurfer] xhemi fsaverage_sym rh backward mapping Dr. Cornelius Kronlage
  • Re: [Freesurfer] xhemi fsaverage_sym rh backward mapping Douglas N. Greve
• [Freesurfer] Error using -nonuintensitycor Jeffrey Spielberg
  • Re: [Freesurfer] Error using -nonuintensitycor Huang, Yujing
  • Re: [Freesurfer] Error using -nonuintensitycor Jeffrey Spielberg
  • Re: [Freesurfer] Error using -nonuintensitycor Jeffrey Spielberg
  • Re: [Freesurfer] Error using -nonuintensitycor Huang, Yujing
  • Re: [Freesurfer] Error using -nonuintensitycor Jeffrey Spielberg
  • Re: [Freesurfer] Error using -nonuintensitycor Huang, Yujing
• Re: [Freesurfer] Human connectome workbench Glasser, Matthew
• [Freesurfer] Freesurfer Question - Pediatric pathology Stefanie Bradley
  • Re: [Freesurfer] Freesurfer Question - Pediatric pathology Zollei, Lilla,Ph.D.
  • Re: [Freesurfer] Freesurfer Question - Pediatric pathology Fernanda Hansen P. de Moraes
  • Re: [Freesurfer] Freesurfer Question - Pediatric pathology Stefanie Bradley
  • Re: [Freesurfer] Freesurfer Question - Pediatric pathology Stefanie Bradley
  • Re: [Freesurfer] Freesurfer Question - Pediatric pathology Zollei, Lilla,Ph.D.
• Re: [Freesurfer] Memory Allocation Issue with mri_histo_atlas_segment_fireants fsbuild
• [Freesurfer] Memory Allocation Issue with mri_histo_atlas_segment_fireants Payam Sadeghi Shabestari
• Re: [Freesurfer] Unusual Cortical Thickness Measurements Fischl, Bruce R.,PHD
  • Re: [Freesurfer] Unusual Cortical Thickness Measurements Fischl, Bruce R.,PHD
• [Freesurfer] Research Assistant Position in the Buckeye Brain Aging Lab Graham, Jillian
• [Freesurfer] Hippocampal Subfield Hierarchies Erin L Ratliff
  • Re: [Freesurfer] Hippocampal Subfield Hierarchies Iglesias Gonzalez, Juan E.
  • Re: [Freesurfer] Hippocampal Subfield Hierarchies Erin L Ratliff
  • Re: [Freesurfer] Hippocampal Subfield Hierarchies Iglesias Gonzalez, Juan E.
• [Freesurfer] Proposed Known Issue: v8.0.0 and v8.0.0-beta Abhishek Roy
• [Freesurfer] aparc2aseg not working Jin Liu
  • Re: [Freesurfer] aparc2aseg not working Douglas N. Greve
• [Freesurfer] autorecon1_norm.mgz not found Ni, Zhen (NIH/NINDS) [C]
  • Re: [Freesurfer] autorecon1_norm.mgz not found Huang, Yujing
  • Re: [Freesurfer] autorecon1_norm.mgz not found Huang, Yujing
  • Re: [Freesurfer] autorecon1_norm.mgz not found Huang, Yujing
• [Freesurfer] "mri_segment_hypothalamic_subunits" killed error Payam Sadeghi Shabestari
  • Re: [Freesurfer] "mri_segment_hypothalamic_subunits" killed error fsbuild
• [Freesurfer] Some library issues with segmentAAN Payam Sadeghi Shabestari
  • Re: [Freesurfer] Some library issues with segmentAAN Huang, Yujing
  • Re: [Freesurfer] Some library issues with segmentAAN Payam Sadeghi Shabestari
• [Freesurfer] Incorrect segmentation and surface offset Tommaso Mariani
  • Re: [Freesurfer] Incorrect segmentation and surface offset Douglas N. Greve
  • Re: [Freesurfer] Incorrect segmentation and surface offset Tommaso Mariani
  • Re: [Freesurfer] Incorrect segmentation and surface offset Douglas N. Greve
  • Re: [Freesurfer] Incorrect segmentation and surface offset Tommaso Mariani
  • Re: [Freesurfer] Incorrect segmentation and surface offset Douglas N. Greve
• [Freesurfer] Problems with Bayesian Segmentation with Histological Atlas "NextBrain" Lukas von Erdmannsdorff
  • Re: [Freesurfer] Problems with Bayesian Segmentation with Histological Atlas "NextBrain" fsbuild
• [Freesurfer] Longitudinal samseg not working - TypeError: transform() got an unexpected keyword argument 'affine' Paola Di Filippo
  • Re: [Freesurfer] Longitudinal samseg not working - TypeError: transform() got an unexpected keyword argument 'affine' Huang, Yujing
  • Re: [Freesurfer] Longitudinal samseg not working - TypeError: transform() got an unexpected keyword argument 'affine' Paola Di Filippo
• [Freesurfer] Freesurfer 8.0.0 version: gtmseg Miguel Ángel Rivas Fernández
  • Re: [Freesurfer] Freesurfer 8.0.0 version: gtmseg Douglas N. Greve
  • Re: [Freesurfer] Freesurfer 8.0.0 version: gtmseg fsbuild
• [Freesurfer] letter Fischl, Bruce R.,PHD
  • Re: [Freesurfer] letter Del Re, Elisabetta
  • Re: [Freesurfer] letter Fischl, Bruce R.,PHD
  • Re: [Freesurfer] letter Shawn Flanagan
• [Freesurfer] Hypothalamic subunits segmentation: volumes = 0 Miguel Ángel Rivas Fernández
  • Re: [Freesurfer] Hypothalamic subunits segmentation: volumes = 0 Iglesias Gonzalez, Juan E.
  • Re: [Freesurfer] Hypothalamic subunits segmentation: volumes = 0 Miguel Ángel Rivas Fernández
• Re: [Freesurfer] illegal instruction - core dumped with samseg lesion fsbuild
  • Re: [Freesurfer] illegal instruction - core dumped with samseg lesion Paola Di Filippo
  • Re: [Freesurfer] illegal instruction - core dumped with samseg lesion fsbuild
  • Re: [Freesurfer] illegal instruction - core dumped with samseg lesion Paola Di Filippo
• [Freesurfer] Freesurfer 8.0 without processing directives Ben Wagner
  • Re: [Freesurfer] Freesurfer 8.0 without processing directives Huang, Yujing
  • Re: [Freesurfer] Freesurfer 8.0 without processing directives Ben Wagner
  • Re: [Freesurfer] Freesurfer 8.0 without processing directives Huang, Yujing
• [Freesurfer] changes in mris_anatomical)stats Zeng, Victor (BIDMC - Keshavan - Psychiatry)
  • Re: [Freesurfer] changes in mris_anatomical)stats Adam Martersteck
• [Freesurfer] Need to re-download for SAMSEG Sebastian Adolfo Rios Quintanilla
  • Re: [Freesurfer] Need to re-download for SAMSEG fsbuild
• [Freesurfer] Freesurfer 8 - ValueError: no field of name pixdim Lubig, Andreas
  • Re: [Freesurfer] Freesurfer 8 - ValueError: no field of name pixdim Lubig, Andreas
  • Re: [Freesurfer] Freesurfer 8 - ValueError: no field of name pixdim Huang, Yujing
  • Re: [Freesurfer] Freesurfer 8 - ValueError: no field of name pixdim Lubig, Andreas
• [Freesurfer] "Re:" text in the Subject: is okay 叶贝宁
• [Freesurfer] [FreeSurfer] Registration of non-mri image to same registered space of mri_image (recon_all) Chavez, Caitlyn
  • Re: [Freesurfer] [FreeSurfer] Registration of non-mri image to same registered space of mri_image (recon_all) Douglas N. Greve
• [Freesurfer] Using HCP-MMP1 (Glasser) atlas with freesurfer Blum, August
• [Freesurfer] News: subregion probabilistic atlases in MNI space available Iglesias Gonzalez, Juan E.
• [Freesurfer] illegal instruction - core dumped with samseg lesion Paola Di Filippo
• [Freesurfer] cortical thickness group analysis Maria Czarnecka
  • Re: [Freesurfer] cortical thickness group analysis Huang, Yujing
• [Freesurfer] Manual Segmentation Adjustments Asli Eroglu
• [Freesurfer] FS version 8.0.0 released Douglas N. Greve
  • Re: [Freesurfer] FS version 8.0.0 released fsbuild
• Re: [Freesurfer] Unknown error when running longitudinal analysis Huang, Yujing
• Re: [Freesurfer] Issues with FS 7.3 skull stripping but NOT mri_synthstrip Hoffmann, Malte,PhD
• [Freesurfer] dt_recon, CC_Anterior (T1) and FA corregistration. Gonzalo Rojas Costa
  • Re: [Freesurfer] dt_recon, CC_Anterior (T1) and FA corregistration. Douglas N. Greve
• [Freesurfer] Recon-all: skip initial inhomogeneity correction Miguel Ángel Rivas Fernández
• [Freesurfer] Convert 1D mgh back to 3D Melissa Thalhammer
  • Re: [Freesurfer] Convert 1D mgh back to 3D Huang, Yujing
• [Freesurfer] dt_recon and corregistration (2)... Gonzalo Rojas Costa
• [Freesurfer] Licensing & permission for publication Brown, Tanya
  • Re: [Freesurfer] Licensing & permission for publication fsbuild
• [Freesurfer] Out of Office June Kang
• [Freesurfer] Question regarding high Disk IO during Local Gyrification Index calculations, Ha, Sung Min
• [Freesurfer] Hippocampus and amygdala segmentation Miguel Ángel Rivas Fernández
  • Re: [Freesurfer] Hippocampus and amygdala segmentation Iglesias Gonzalez, Juan E.
• Re: [Freesurfer] volumes and surfaces misalignment in freeview Wang, Ruopeng
• [Freesurfer] Unable to download version 8.0.0 Ziming Cui-MSBA23A
  • Re: [Freesurfer] Unable to download version 8.0.0 fsbuild
• [Freesurfer] *** buffer overflow detected *** Brunno M. de Campos
  • Re: [Freesurfer] *** buffer overflow detected *** fsbuild
  • Re: [Freesurfer] *** buffer overflow detected *** Brunno M. de Campos
  • Re: [Freesurfer] *** buffer overflow detected *** Brunno M. de Campos
  • Re: [Freesurfer] *** buffer overflow detected *** fsbuild
  • Re: [Freesurfer] *** buffer overflow detected *** Brunno M. de Campos
• [Freesurfer] Clarification on co-registration using bbregister Gabriella Monopoli
• [Freesurfer] Inquiry Regarding FreeSurfer Usage in Clinical Trials Yeh Shang Ming
  • Re: [Freesurfer] Inquiry Regarding FreeSurfer Usage in Clinical Trials fsbuild
• [Freesurfer] CSF Volume difference between recon-all-clinical and SAMSEG Taghizadeh Mortezaei, Nima
• [Freesurfer] hounsfield units based in some aseg.mgz labels Gonzalo Rojas Costa
• Re: [Freesurfer] ERC_bayesian_segmentation is not shipped in the nightly dev build fsbuild
• [Freesurfer] hounsfield units for some aseg.mgz labels Gonzalo Rojas Costa
• [Freesurfer] ERC_bayesian_segmentation is not shipped in the nightly dev build Chourrout, Matthieu
• [Freesurfer] Optimizing FreeSurfer for Mouse brain Ramesh Babu
  • Re: [Freesurfer] Optimizing FreeSurfer for Mouse brain Douglas N. Greve
• [Freesurfer] recon-all failed Paola Di Filippo
  • Re: [Freesurfer] recon-all failed fsbuild
  • Re: [Freesurfer] recon-all failed Paola Di Filippo
• [Freesurfer] Unusual Cortical Thickness Measurements in Specific Regions hmarz...@student.ubc.ca
• [Freesurfer] Issue with Voxel Size Mismatch in Samseg-Long Pipeline Taghizadeh Mortezaei, Nima

• Earlier messages