where did aseg.nii.gz come from? Is it an individual subject or on the mni305? If from an individual try mri_vol2vol --interp nearest --mov aseg.mgz --reg transforms/talairach.xfm.lta --o aseg.mni305.mgz
On 2/8/2025 11:34 AM, neda afzalian wrote: > External Email - Use Caution > > To whome it may concern > > I want to do a volume based analysis in the MNI305 space. Specifically i want > to use the specified subcortical segments which are exteracted and labeled in > the aseg.nii.gz file > The problem is that the dimension of two space are not the same. > How can i transform the indices of subcortical segments from aseg.nii.gz to > mni305 space? > Best > Neda > >> > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at https://www.massgeneralbrigham.org/complianceline <https://www.massgeneralbrigham.org/complianceline> . Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.
