External Email - Use Caution Dear all,
To have the best use of freesurfer, I would like to convert the aal3 atlas ( [ https://secure-web.cisco.com/1Lqm9IW7wIlcxFf6HBv0-tMARacY0dOCxDHqgYcxMjc9ee0EoyUKGNqoVoky2xIh7MXTZKeNQnXZfSW5QqR9eUXTJPuaNy_lR6Mkvhg9qINmYS0lx45H5IbC-C7fgTnTzrL5mJmvCEXDxzZ3eul3ROhLygf_Hqm98HrqISg84x6ghfUDT414qE6NnwquBAyEnLPOu9JX_8U7CbJc_a4D1QY-2bsUe_DT47UnOE4voeL9J0oXZFaAi6aEn8gGACa2LHxjkkqZySq5b7qjfCPO1Vrpxw-6I8s2G_DoQ7rbZs3NlyC_2MWg1fnQuOLKA1LFqVtofl_ZYRQryvqqKw7Nkcw/https%3A%2F%2Fwww.gin.cnrs.fr%2Ffr%2Foutils%2Faal%2F | https://secure-web.cisco.com/1Lqm9IW7wIlcxFf6HBv0-tMARacY0dOCxDHqgYcxMjc9ee0EoyUKGNqoVoky2xIh7MXTZKeNQnXZfSW5QqR9eUXTJPuaNy_lR6Mkvhg9qINmYS0lx45H5IbC-C7fgTnTzrL5mJmvCEXDxzZ3eul3ROhLygf_Hqm98HrqISg84x6ghfUDT414qE6NnwquBAyEnLPOu9JX_8U7CbJc_a4D1QY-2bsUe_DT47UnOE4voeL9J0oXZFaAi6aEn8gGACa2LHxjkkqZySq5b7qjfCPO1Vrpxw-6I8s2G_DoQ7rbZs3NlyC_2MWg1fnQuOLKA1LFqVtofl_ZYRQryvqqKw7Nkcw/https%3A%2F%2Fwww.gin.cnrs.fr%2Ffr%2Foutils%2Faal%2F ] ) into an .annot file. This particular topic has already been answered in the archive: [ https://secure-web.cisco.com/1N6iTTI7fxUa9y78B1gTfYeDCfDE5qyKqLLwhgdQTdpja7t_zFRsZmStj6FQU3bhykiBPocuziPe-SzUX8LO0LlInRblM5zJRMGfsDcPurn_zlWxkwJYe4_WidIsBzZv3ivW64UiZxJ78I4_JTtj5R1_KPCl0Yw7i5QiuoVyDzu7CSJtFLOJiqKXTOE0wyFtJ01y7aE68LFlu9VHypTGJ0cmV3vyvXj8h-WLWfV6Aoqpz-yBZxAHIpVU51Oc-X7_5RsXQK9q_BDrdWFPLMxGeYdvB0wC1Zp7s1sNKahn_ofYpveLbs9MUArjXRWIJeVejjZrQF_KVn8Yw3nv1XIbPUg/https%3A%2F%2Fwww.mail-archive.com%2Ffreesurfer%40nmr.mgh.harvard.edu%2Fmsg63687.html | https://secure-web.cisco.com/1N6iTTI7fxUa9y78B1gTfYeDCfDE5qyKqLLwhgdQTdpja7t_zFRsZmStj6FQU3bhykiBPocuziPe-SzUX8LO0LlInRblM5zJRMGfsDcPurn_zlWxkwJYe4_WidIsBzZv3ivW64UiZxJ78I4_JTtj5R1_KPCl0Yw7i5QiuoVyDzu7CSJtFLOJiqKXTOE0wyFtJ01y7aE68LFlu9VHypTGJ0cmV3vyvXj8h-WLWfV6Aoqpz-yBZxAHIpVU51Oc-X7_5RsXQK9q_BDrdWFPLMxGeYdvB0wC1Zp7s1sNKahn_ofYpveLbs9MUArjXRWIJeVejjZrQF_KVn8Yw3nv1XIbPUg/https%3A%2F%2Fwww.mail-archive.com%2Ffreesurfer%40nmr.mgh.harvard.edu%2Fmsg63687.html ] Or in the Github: [ https://secure-web.cisco.com/1AIwRVtOcHlEGoAfLLunpFibQhBh4kbs13b_zeN2_tPumRstbetyRTgyfvKN_l1ZY_NKzrZ0P06B1TisMB4HHI0fS7l6s_-ra0d3bp9q4eSryfqQKprIernff6f_O7bpHm9hLUC6dbGpaw5mTgv0DRCaHFBoIMgaf-ps4ejuXri6bFvd6KSZyKeJNybVBIWI1GVLe5BZ3ZVFvQCWUphMagVadGmDqgHP2K7Zb3vnTMJUvqT-4-R6-nDj7mBcd7a96VzBGzPwyNnG5mSGwBmgQu4gyfBuAJ9P7KzO0_D1egEYwgqD3VkbzqTniKEd2hzorzGF-28lifEvnqXMWbzp8DQ/https%3A%2F%2Fgithub.com%2Ffaskowit%2FmultiAtlasTT%2Fissues%2F8 | https://secure-web.cisco.com/1AIwRVtOcHlEGoAfLLunpFibQhBh4kbs13b_zeN2_tPumRstbetyRTgyfvKN_l1ZY_NKzrZ0P06B1TisMB4HHI0fS7l6s_-ra0d3bp9q4eSryfqQKprIernff6f_O7bpHm9hLUC6dbGpaw5mTgv0DRCaHFBoIMgaf-ps4ejuXri6bFvd6KSZyKeJNybVBIWI1GVLe5BZ3ZVFvQCWUphMagVadGmDqgHP2K7Zb3vnTMJUvqT-4-R6-nDj7mBcd7a96VzBGzPwyNnG5mSGwBmgQu4gyfBuAJ9P7KzO0_D1egEYwgqD3VkbzqTniKEd2hzorzGF-28lifEvnqXMWbzp8DQ/https%3A%2F%2Fgithub.com%2Ffaskowit%2FmultiAtlasTT%2Fissues%2F8 ] However, I'm not used to that field and the documentation found online on the different functions to use isn't sufficient for me to achieve my goal. Is it possible to have a more detailed answer than the one already linked? Thank you in advance for the help, Kind regard -- Vianney Salvi Doctorant équipe MOCOCO, Laboratoire INCIA
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at https://www.massgeneralbrigham.org/complianceline <https://www.massgeneralbrigham.org/complianceline> . Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.