External Email - Use Caution Hi, thanks.
> version of freersurfer you are running: 7.4.1 > OS name and version you are running: Ubuntu 22 > amount of RAM on your machine: 32 gb Best, Brunno M Campos University of Campinas Em qui., 20 de fev. de 2025 às 08:47, fsbuild <fsbu...@contbay.com> escreveu: > External Email - Use Caution > > > Please list: > > > version of freersurfer you are running > > OS name and version you are running > > amount of RAM on your machine > > - R. > > On Feb 20, 2025, at 05:58, Brunno M. de Campos <bru...@unicamp.br> wrote: > > External Email - Use Caution > > Dear all, > > I run my script for longitudinal processing based on: individual > processing (recon-all -i) + base image creation (recon-all -base) and > longitudinal processing (recon-all -long). > > In some cases (not always), the process terminates with errors, apparently > at the same stage. The log states, among other things, "Reading > texture...*** buffer overflow detected ***: terminated Command terminated > by signal 6". > > 1 - I assume that I have exceeded my memory capacity. Am I correct? > I have, in fact, written a script that parallelizes these processes, but I > might be distributing the workload poorly if that is the case. > > 2 - If this is indeed the issue, do you know the peak memory required for > such a process? > > Thank you! > Brunno M Campos > University of Campinas > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://secure-web.cisco.com/1IUzS2y6h4Y-uKi9_ClfEXvfI-BZqyjZYW1FH8yQ7aalrdTwbl3T6VRQWFiR2ioZZpda71RT0jmPU-kXWVtSCmC1TMTJbEynX0zu5ZY8WtJvA6q-usbMDte5Sfj5BI3SOXO31tZm5aZ46xrrgJYlUhC5N4s7_QoT3M-ct2V846G7JFpTAGvaEXHvOfHTYF2wYFxAHFNzul0QyRudkmHV8tWjmMgbkPM4dk5YPhRwFVZY4NzYaVYJv1_zBiccmgZaOsCWMbXxpcgrD76MaHNUNj5S9uXusA8pcwBYNQCVYbqcJmbI69srVOwk4U-ZFw0r_yFBQJd-3-yygANVnbBnfhw/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://secure-web.cisco.com/1IUzS2y6h4Y-uKi9_ClfEXvfI-BZqyjZYW1FH8yQ7aalrdTwbl3T6VRQWFiR2ioZZpda71RT0jmPU-kXWVtSCmC1TMTJbEynX0zu5ZY8WtJvA6q-usbMDte5Sfj5BI3SOXO31tZm5aZ46xrrgJYlUhC5N4s7_QoT3M-ct2V846G7JFpTAGvaEXHvOfHTYF2wYFxAHFNzul0QyRudkmHV8tWjmMgbkPM4dk5YPhRwFVZY4NzYaVYJv1_zBiccmgZaOsCWMbXxpcgrD76MaHNUNj5S9uXusA8pcwBYNQCVYbqcJmbI69srVOwk4U-ZFw0r_yFBQJd-3-yygANVnbBnfhw/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer > The information in this e-mail is intended only for the person to whom it > is addressed. If you believe this e-mail was sent to you in error and the > e-mail contains patient information, please contact the Mass General > Brigham Compliance HelpLine at > https://secure-web.cisco.com/16mCaEYEloV_DM7IXEor5EUDM-F-Yrc149dgB8zz8YtBeuD5udEzyBTCwYCNRxWwUlnJ07cJzlPfYEOOHUsMaGFuYdNDrogT_hyp7n-6QrvMI_h7sOzfHVs45LODzFET0Ia9clxtiGeUrInomG871049plAaYdSV0e4Uh7_I5P0sXhkeTfuu4Ak8XfQZptEDNGHLo9gYICF8nAe7koZIbygvfFnPU_Ta6EjXspdB_q9S3Fohnqw8j_peGHzivk2gOFJWTJgi568PEJSMIbvTk15bpvzm0s2esSXBBjtn0M0PAdp2PK0gaib20EzFDRGcHaUOt9GoDgAl1kH34NBRDBQ/https%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline > < > https://secure-web.cisco.com/16mCaEYEloV_DM7IXEor5EUDM-F-Yrc149dgB8zz8YtBeuD5udEzyBTCwYCNRxWwUlnJ07cJzlPfYEOOHUsMaGFuYdNDrogT_hyp7n-6QrvMI_h7sOzfHVs45LODzFET0Ia9clxtiGeUrInomG871049plAaYdSV0e4Uh7_I5P0sXhkeTfuu4Ak8XfQZptEDNGHLo9gYICF8nAe7koZIbygvfFnPU_Ta6EjXspdB_q9S3Fohnqw8j_peGHzivk2gOFJWTJgi568PEJSMIbvTk15bpvzm0s2esSXBBjtn0M0PAdp2PK0gaib20EzFDRGcHaUOt9GoDgAl1kH34NBRDBQ/https%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline> > . > Please note that this e-mail is not secure (encrypted). If you do not > wish to continue communication over unencrypted e-mail, please notify the > sender of this message immediately. Continuing to send or respond to > e-mail after receiving this message means you understand and accept this > risk and wish to continue to communicate over unencrypted e-mail. >
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