Have you tried running freeview as an app bundle? Or can you try running 
freeview directly from the binary location? Like this:

$FREESURFER_HOME/Freeview.app/Contents/MacOS/freeview

On Jan 2, 2025, at 7:14 AM, Tietze, Anna 
<anna.tie...@charite.de<mailto:anna.tie...@charite.de>> wrote:


Hi,

When I want to open files with freeview, it crashes immediately. I tried my own 
recon-all output and the bert dataset. Can you help me?

Operating system: Mac, Sonoma 14.7.1
Fressurfer version 7.4.0
XQuatz 2.8.5
licence.txt located in: /Applications/freesurfer/7.4.0/license.txt (can be 
read, as recon-all works)
environment is set by FREESURFER_HOME=/Applications/freesurfer/7.4.0 and source 
$FREESURFER_HOME/SetUpFreeSurfer.sh

When I run the command freeview, the following message is given:
/Applications/freesurfer/7.4.0/bin/freeview: line 2:  6615 Segmentation fault: 
11  $FREESURFER_HOME/Freeview.app/Contents/MacOS/freeview "$@"

Or trying to open a file:
freeview -v 
/Users/annatietze/Documents/freesurfer/freesurfer_subjects/nini_ra/mri/orig/001.mgz
/Applications/freesurfer/7.4.0/bin/freeview: line 2:  6765 Segmentation fault: 
11  $FREESURFER_HOME/Freeview.app/Contents/MacOS/freeview "$@"

freeview -v /Applications/freesurfer/7.4.0/subjects/bert/mri/orig/001.mgz
/Applications/freesurfer/7.4.0/bin/freeview: line 2:  6799 Segmentation fault: 
11  $FREESURFER_HOME/Freeview.app/Contents/MacOS/freeview "$@"

Attached is a detailed error report.

What did I overlook?? Thank you so much for help!

Best, Anna
<problem report freeview.rtf>

        External Email - Use Caution

_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu>
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is 
addressed.  If you believe this e-mail was sent to you in error and the e-mail 
contains patient information, please contact the Mass General Brigham 
Compliance HelpLine at https://www.massgeneralbrigham.org/complianceline 
<https://www.massgeneralbrigham.org/complianceline> .
Please note that this e-mail is not secure (encrypted).  If you do not wish to 
continue communication over unencrypted e-mail, please notify the sender of 
this message immediately.  Continuing to send or respond to e-mail after 
receiving this message means you understand and accept this risk and wish to 
continue to communicate over unencrypted e-mail. 

Reply via email to