External Email - Use Caution        

hi everyone,
i have succesfully managed to download freesurfer with ubuntu 22 on a
virtual machine. i've tried some tutorials and everything is working fine.
now i am trying to run my first recon-all, but this is the error I get:

-------- freesurfer-linux-ubuntu22_x86_64-7.4.1-20230614-7eb8460 --------
Setting up environment for FreeSurfer/FS-FAST (and FSL)
FREESURFER_HOME   /usr/local/freesurfer/7.4.1
FSFAST_HOME       /usr/local/freesurfer/7.4.1/fsfast
FSF_OUTPUT_FORMAT nii.gz
SUBJECTS_DIR      /usr/local/freesurfer/7.4.1/subjects
MNI_DIR           /usr/local/freesurfer/7.4.1/mni
paolasofia@Freesurfer-ub22:~$ recon-all -subject angcher.02.04.91.12.09.22
-sd /usr/local/freesurfer/7.4.1/subjects  -i
/home/paolasofia/DICOM.ANG.CHER.2.4.91/DICOM/./1.3.12.2.1107.5.2.19.146011.2022091213511174521774361.dcm
-i
/home/paolasofia/DICOM.ANG.CHER.2.4.91/DICOM/./1.3.12.2.1107.5.2.19.146011.2022091213511942168418847.dcm
-i
/home/paolasofia/DICOM.ANG.CHER.2.4.91/DICOM/./1.3.12.2.1107.5.2.19.146011.2022091213511945768618951.dcm
-all
mkdir: cannot create directory
'/usr/local/freesurfer/7.4.1/subjects/angcher.02.04.91.12.09.22':
Permission denied
fs-check-version --s angcher.02.04.91.12.09.22 --o /tmp/tmp.VZQFHn
ERROR: cannot find angcher.02.04.91.12.09.22
recon-all: version check failed
fs-check-version --s angcher.02.04.91.12.09.22 --o /tmp/tmp.VZQFHn



how could i solve this problem?
thanks in advance

-- 

_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is 
addressed.  If you believe this e-mail was sent to you in error and the e-mail 
contains patient information, please contact the Mass General Brigham 
Compliance HelpLine at https://www.massgeneralbrigham.org/complianceline 
<https://www.massgeneralbrigham.org/complianceline> .
Please note that this e-mail is not secure (encrypted).  If you do not wish to 
continue communication over unencrypted e-mail, please notify the sender of 
this message immediately.  Continuing to send or respond to e-mail after 
receiving this message means you understand and accept this risk and wish to 
continue to communicate over unencrypted e-mail. 

Reply via email to