freesurfer

Messages by Date

2023/04/28 Re: [Freesurfer] contrast-FSGD question Federico Uquillas
2023/04/28 [Freesurfer] Fwd: questions about mri_normalize Fischl, Bruce R.,PHD
2023/04/28 Re: [Freesurfer] substantia nigra Douglas N. Greve
2023/04/28 [Freesurfer] substantia nigra Lund, Anina
2023/04/28 Re: [Freesurfer] parallel recon-all using T1,T2 images Douglas N. Greve
2023/04/28 Re: [Freesurfer] contrast-FSGD question Douglas N. Greve
2023/04/28 Re: [Freesurfer] Any large stash of labelled brain MRIs for CNN training? Douglas N. Greve
2023/04/28 [Freesurfer] Freesurfer mailing list submissions julia emily
2023/04/28 Re: [Freesurfer] Automatic Calculation of White matter ADC Values using SynthSeg Douglas N. Greve
2023/04/28 Re: [Freesurfer] Fw: repeated measures anova for 4 treatments by 2 timepoints Douglas N. Greve
2023/04/28 Re: [Freesurfer] register to mni space Douglas N. Greve
2023/04/28 Re: [Freesurfer] creating average labels Douglas N. Greve
2023/04/28 Re: [Freesurfer] extracting values from signifciant clusters Douglas N. Greve
2023/04/28 Re: [Freesurfer] Subcortical regions of Brainnetome Atlas Douglas N. Greve
2023/04/28 Re: [Freesurfer] Extracting statistical values from significant ROIs after running GLM Douglas N. Greve
2023/04/27 Re: [Freesurfer] visualization, heatmap Federico Uquillas
2023/04/27 Re: [Freesurfer] FSFAST: wrong brain mask in preproc Elmira Hassanzadeh
2023/04/27 [Freesurfer] visualization, heatmap Eszter Boros
2023/04/27 Re: [Freesurfer] parallel recon-all using T1,T2 images Toshiharu Kamishikiryo
2023/04/27 [Freesurfer] Fwd: questions about mri_normalize John Anderson
2023/04/27 Re: [Freesurfer] EasyReg for group-average template? AmirHussein Abdolalizadeh
2023/04/27 Re: [Freesurfer] contrast-FSGD question Federico Uquillas
2023/04/27 Re: [Freesurfer] parallel recon-all using T1,T2 images Michael Mc Laughlin
2023/04/27 [Freesurfer] parallel recon-all using T1,T2 images Toshiharu Kamishikiryo
2023/04/26 Re: [Freesurfer] dcmunpack behavior with scouts Douglas N. Greve
2023/04/26 Re: [Freesurfer] Does Incorporating T2 into recon-all impact ICV and local morphometric estimates? Douglas N. Greve
2023/04/26 Re: [Freesurfer] FSFAST: multiple resting state runs Douglas N. Greve
2023/04/26 Re: [Freesurfer] FSFAST: multiple resting state runs Douglas N. Greve
2023/04/26 Re: [Freesurfer] FSFAST: wrong brain mask in preproc Douglas N. Greve
2023/04/26 [Freesurfer] Neuroimaging Postdoctoral Fellowship Position: Bronte-Stewart Lab at Stanford University Kevin Bryant Wilkins
2023/04/26 [Freesurfer] FSFAST: multiple resting state runs Elmira Hassanzadeh
2023/04/26 [Freesurfer] The longitudinal Midlife in the U.S. (MIDUS) study is looking for postdoctoral researchers STACEY M SCHAEFER
2023/04/26 [Freesurfer] Freesurfer 7.2.0 release in Ubuntu 18d .ova.7z password Min Wang
2023/04/26 Re: [Freesurfer] EasyReg for group-average template? Iglesias Gonzalez, Juan E.
2023/04/26 Re: [Freesurfer] Alternatives to Qdec Huang, Yujing
2023/04/26 [Freesurfer] EasyReg for group-average template? AmirHussein Abdolalizadeh
2023/04/26 [Freesurfer] Alternatives to Qdec 余卓远
2023/04/25 Re: [Freesurfer] passcode to install freesurfer Michelle Diniz
2023/04/25 Re: [Freesurfer] passcode to install freesurfer ANAIS LLORENS
2023/04/24 [Freesurfer] contrast-FSGD question Fred d'Oleire Uquillas
2023/04/24 Re: [Freesurfer] Freesurfer 7.2 Virtualbox - 7z file password Michelle Diniz
2023/04/24 [Freesurfer] Longitudinal TRACULA subject folder confusion Brendan Angelo
2023/04/24 [Freesurfer] Freesurfer 7.2 Virtualbox - 7z file password Michelle Diniz
2023/04/24 Re: [Freesurfer] mri_convert --conform Huang, Yujing
2023/04/24 [Freesurfer] Automatic Calculation of White matter ADC Values using SynthSeg bar gen
2023/04/24 [Freesurfer] trac-all and bedpostx/xfibres GPU Bennet Fauber
2023/04/24 [Freesurfer] passcode to install freesurfer ANAIS LLORENS
2023/04/24 Re: [Freesurfer] ACPC alignment and RF/B1 bias correction before processing Toshiharu Kamishikiryo
2023/04/24 [Freesurfer] How to extract TRACULA's fiber bundles in MNI template space Woo-Suk Tae
2023/04/24 [Freesurfer] TRACULA intensity normalization Silvia De Francesco
2023/04/23 Re: [Freesurfer] free view crash report fsbuild
2023/04/23 Re: [Freesurfer] freesurfer 5.3 license on ubuntu 22 fsbuild
2023/04/23 [Freesurfer] mri_convert --conform Giuseppe
2023/04/23 [Freesurfer] freesurfer 5.3 license on ubuntu 22 Hadas, Itay
2023/04/23 Re: [Freesurfer] ACPC alignment and RF/B1 bias correction before processing Glasser, Matt
2023/04/23 [Freesurfer] ACPC alignment and RF/B1 bias correction before processing Toshiharu Kamishikiryo
2023/04/21 [Freesurfer] Fw: repeated measures anova for 4 treatments by 2 timepoints Resnick, Patricia
2023/04/21 [Freesurfer] register to mni space Carlos Alcocer
2023/04/20 Re: [Freesurfer] Hippocampal/amygdala subfields hemisphere error Hemond, Christopher
2023/04/20 [Freesurfer] Freesurfer archive password Даниил Кирдяшкин
2023/04/20 [Freesurfer] Any large stash of labelled brain MRIs for CNN training? Keith E Moore
2023/04/20 Re: [Freesurfer] creating average labels Carlos Alcocer
2023/04/20 [Freesurfer] free view crash report Suman Nag
2023/04/20 [Freesurfer] VM freesurfer version Federico Uquillas
2023/04/20 [Freesurfer] postdoctoral position available at the University of Toronto Brain, Body, and Perception Research Program Jamie Feusner
2023/04/20 Re: [Freesurfer] creating average labels Huang, Yujing
2023/04/20 [Freesurfer] questions about mri_normalize John Anderson
2023/04/19 [Freesurfer] extracting values from signifciant clusters Eszter Boros
2023/04/19 [Freesurfer] Subcortical regions of Brainnetome Atlas Garrett Tan
2023/04/19 Re: [Freesurfer] Hippocampal/amygdala subfields hemisphere error Iglesias Gonzalez, Juan E.
2023/04/19 [Freesurfer] Hippocampal/amygdala subfields hemisphere error Hemond, Christopher
2023/04/19 Re: [Freesurfer] TIV from manually corrected aseg+aparc.mgz Huang, Yujing
2023/04/19 [Freesurfer] creating average labels Carlos Alcocer
2023/04/19 Re: [Freesurfer] is it possible to run a longitudinal study on 2 "-base" images? Huang, Yujing
2023/04/19 [Freesurfer] License key Mohammad Amin Khodadadegan
2023/04/19 [Freesurfer] Fw: freesurfer download zip password Parmaksiz, Deniz
2023/04/19 [Freesurfer] TIV from manually corrected aseg+aparc.mgz Daniela Vecchio
2023/04/19 [Freesurfer] Fwd: Password to VirtualMachine request Gromki Hados
2023/04/19 [Freesurfer] Extracting statistical values from significant ROIs after running GLM Akansha Mahesh Naraindas
2023/04/18 Re: [Freesurfer] ABORT error when running freeview fsbuild
2023/04/18 [Freesurfer] is it possible to run a longitudinal study on 2 "-base" images? KennethSPrice
2023/04/18 [Freesurfer] ABORT error when running freeview Keith E Moore
2023/04/18 Re: [Freesurfer] Loading and editing volumetric .annot in Matlab Huang, Yujing
2023/04/18 [Freesurfer] Loading and editing volumetric .annot in Matlab Len Jacob
2023/04/18 [Freesurfer] freesurfer download zip password Parmaksiz, Deniz
2023/04/18 [Freesurfer] How to convert segmentSubjectT1T2_autoEstimateAlveusML.m to matlab binary file? Nobuaki Hondo
2023/04/17 Re: [Freesurfer] Freesurfer crash question fsbuild
2023/04/17 Re: [Freesurfer] ERROR: flag i unrecognized Aaron Tanenbaum
2023/04/17 Re: [Freesurfer] ERROR: flag i unrecognized Iglesias Gonzalez, Juan E.
2023/04/17 [Freesurfer] Does Incorporating T2 into recon-all impact ICV and local morphometric estimates? Steven Meisler
2023/04/17 [Freesurfer] recommended change to FreeSurferEnv.sh Aaron Tanenbaum
2023/04/17 [Freesurfer] covariates in 2nd level anaysis Maria Czarnecka
2023/04/17 [Freesurfer] Fwd: Turku PET Centre Brain Imaging Course / September 19th-21st 2022 Douglas N. Greve
2023/04/17 Re: [Freesurfer] ERROR: flag i unrecognized Huang, Yujing
2023/04/17 [Freesurfer] FsFast retinotopy and its flags IOANNUCCI Stefano
2023/04/16 [Freesurfer] freeview rh and lh overlay_mask files both showing in the lh hemisphere Jewelia Karina Yao
2023/04/16 [Freesurfer] FreeSurfer VirtualBox VM Archive Password Kunal Kapoor
2023/04/15 [Freesurfer] ERROR: flag i unrecognized Francisco Polito haro
2023/04/14 [Freesurfer] Fwd: FS VM zip password Kiarash Danesh
2023/04/13 Re: [Freesurfer] [FreeSurfer] Error: mri_ca_register with non-zero status 143 Krystal Xiwing Yau
2023/04/13 Re: [Freesurfer] [FreeSurfer] Error: mri_ca_register with non-zero status 143 Krystal Xiwing Yau
2023/04/13 [Freesurfer] Neuroimaging research technician positions available at Washington University in St. Louis Keefe, Sarah
2023/04/13 Re: [Freesurfer] [FreeSurfer] Error: mri_ca_register with non-zero status 143 Bennet Fauber
2023/04/13 Re: [Freesurfer] [FreeSurfer] Error: mri_ca_register with non-zero status 143 Huang, Yujing
2023/04/12 Re: [Freesurfer] Regarding the Use of Custom atlases containing deep brain nuclei in recon-all segmentation Douglas N. Greve
2023/04/12 Re: [Freesurfer] mris_flatten Version 6 vs. 7 Vinke, Louis N.,PHD
2023/04/12 [Freesurfer] Regarding the Use of Custom atlases containing deep brain nuclei in recon-all segmentation Abhishek Prabhu
2023/04/11 [Freesurfer] Concerns About Acquisition Parameters Biasing Longitudinal Study Results NicolasNorton
2023/04/11 Re: [Freesurfer] mris_flatten Version 6 vs. 7 Nasr, Shahin,Ph.D.
2023/04/11 Re: [Freesurfer] mris_flatten Version 6 vs. 7 Fischl, Bruce R.,PHD
2023/04/11 Re: [Freesurfer] mris_flatten Version 6 vs. 7 Vinke, Louis N.,PHD
2023/04/11 Re: [Freesurfer] Paired analysis contrast with multiple classes Douglas N. Greve
2023/04/11 Re: [Freesurfer] T1 with contrast Douglas N. Greve
2023/04/11 Re: [Freesurfer] Subcallosal cingulate cortex segmentation/parcellation Douglas N. Greve
2023/04/11 Re: [Freesurfer] dcmunpack behavior with scouts Douglas N. Greve
2023/04/10 [Freesurfer] Zip File Passcode Mike Iatrakis
2023/04/10 [Freesurfer] Paired analysis contrast with multiple classes Christoph Aster
2023/04/09 Re: [Freesurfer] How to create a functional ROI on surface where activation is peak? Andy Kim
2023/04/09 Re: [Freesurfer] Pass code for freesurfer virtual images and QDEC question Douglas N. Greve
2023/04/08 Re: [Freesurfer] mris_flatten Version 6 vs. 7 Fischl, Bruce R.,PHD
2023/04/08 Re: [Freesurfer] mris_flatten Version 6 vs. 7 Fischl, Bruce R.,PHD
2023/04/08 Re: [Freesurfer] mris_flatten Version 6 vs. 7 Fischl, Bruce R.,PHD
2023/04/08 Re: [Freesurfer] mris_flatten Version 6 vs. 7 Fischl, Bruce R.,PHD
2023/04/08 [Freesurfer] Pass code for freesurfer virtual images and QDEC question mariangela asimina
2023/04/07 Re: [Freesurfer] mris_flatten Version 6 vs. 7 Fischl, Bruce R.,PHD
2023/04/07 Re: [Freesurfer] mris_flatten Version 6 vs. 7 Nasr, Shahin,Ph.D.
2023/04/07 Re: [Freesurfer] mris_flatten Version 6 vs. 7 Fischl, Bruce R.,PHD
2023/04/07 [Freesurfer] T1 with contrast Carlos Alcocer
2023/04/07 [Freesurfer] Fwd: Research scientist positions at OSUMC! Douglas N. Greve
2023/04/07 [Freesurfer] VM Password Janssen, J.A.M. (Julia)
2023/04/06 [Freesurfer] Subcallosal cingulate cortex segmentation/parcellation Carlos Alcocer
2023/04/06 Re: [Freesurfer] FreeSurfer container recipe? Bennet Fauber
2023/04/06 Re: [Freesurfer] FreeSurfer container recipe? Wighton, Paul
2023/04/06 Re: [Freesurfer] -gcareg dropped from -autorecon2-volonly Douglas N. Greve
2023/04/06 [Freesurfer] Open research assistant position at Ohio State University Osher, David E.
2023/04/06 Re: [Freesurfer] mri_glmfit correction across lobes Douglas N. Greve
2023/04/06 Re: [Freesurfer] mri_glmfit correction across lobes John Anderson
2023/04/06 [Freesurfer] FreeSurfer container recipe? Bennet Fauber
2023/04/05 [Freesurfer] lh.inflated and rh.inflated generated by mris_inflate is biased 韦亚辉
2023/04/05 Re: [Freesurfer] Updating to Current Version of Freesurfer Douglas N. Greve
2023/04/05 Re: [Freesurfer] mri_glmfit correction across lobes Douglas N. Greve
2023/04/05 Re: [Freesurfer] How to create a functional ROI on surface where activation is peak? Douglas N. Greve
2023/04/05 Re: [Freesurfer] synthstrip error Fischl, Bruce R.,PHD
2023/04/05 [Freesurfer] synthstrip error Salil Soman
2023/04/05 Re: [Freesurfer] How to use custom fill with up to other labels flag Wang, Ruopeng
2023/04/05 [Freesurfer] dcmunpack behavior with scouts Proulx, Jean Sebastien
2023/04/05 [Freesurfer] FreeSurfer / Tracula segmentation between seed points? Christian Owen
2023/04/04 Re: [Freesurfer] Freeview segmentation fault fsbuild
2023/04/04 [Freesurfer] Updating to Current Version of Freesurfer Lauren Stephens
2023/04/04 Re: [Freesurfer] -gcareg dropped from -autorecon2-volonly Christopher Markiewicz
2023/04/04 Re: [Freesurfer] Freeview segmentation fault Wang, Ruopeng
2023/04/04 [Freesurfer] mri_glmfit correction across lobes John Anderson
2023/04/04 Re: [Freesurfer] Freeview segmentation fault OSE KADIRI
2023/04/04 Re: [Freesurfer] Freeview segmentation fault Wang, Ruopeng
2023/04/04 Re: [Freesurfer] FLAIRpial bug Silvia De Francesco
2023/04/04 [Freesurfer] FreeSurfer VM pass code Toni Gurguí
2023/04/04 [Freesurfer] Volume extraction of thalamus subfields in v7.3.2 Melissa Thalhammer
2023/04/04 Re: [Freesurfer] Issue with running recon-all on Synthsr output Huang, Yujing
2023/04/04 [Freesurfer] How to create a functional ROI on surface where activation is peak? Andy Kim
2023/04/03 [Freesurfer] Freeview segmentation fault OSE KADIRI
2023/04/03 [Freesurfer] Issue with running recon-all on Synthsr output hmarz...@student.ubc.ca
2023/04/03 Re: [Freesurfer] Which motion correction parameters are used in FSFAST? Andy Kim
2023/04/03 Re: [Freesurfer] Finding non-contiguous labels within an annotation Douglas N. Greve
2023/04/03 Re: [Freesurfer] Which motion correction parameters are used in FSFAST? Douglas N. Greve
2023/04/03 Re: [Freesurfer] moving results from fsaverage space to subject space Douglas N. Greve
2023/03/31 Re: [Freesurfer] Is it possible to add additional T1 scans to improve surfaces/segmentation Michael Mc Laughlin
2023/03/31 Re: [Freesurfer] Which motion correction parameters are used in FSFAST? Andy Kim
2023/03/31 Re: [Freesurfer] White matter exclusions occurring in v7.3.2 but not v5.3 Douglas N. Greve
2023/03/31 Re: [Freesurfer] Synthseg segmentation of skull etc Fraser Aitken
2023/03/31 Re: [Freesurfer] Synthseg segmentation of skull etc Douglas N. Greve
2023/03/31 [Freesurfer] Synthseg segmentation of skull etc Fraser Aitken
2023/03/31 Re: [Freesurfer] automatic screenshots to all axial slices Wang, Ruopeng
2023/03/31 [Freesurfer] automatic screenshots to all axial slices Gonzalo Rojas Costa
2023/03/31 [Freesurfer] multiple axial slice screenshots Gonzalo Rojas Costa
2023/03/31 Re: [Freesurfer] Is it possible to add additional T1 scans to improve surfaces/segmentation Fischl, Bruce R.,PHD
2023/03/31 Re: [Freesurfer] moving results from fsaverage space to subject space Douglas N. Greve
2023/03/31 Re: [Freesurfer] White matter exclusions occurring in v7.3.2 but not v5.3 Douglas N. Greve
2023/03/31 Re: [Freesurfer] Which motion correction parameters are used in FSFAST? Douglas N. Greve
2023/03/31 [Freesurfer] moving results from fsaverage space to subject space Jennifer Kilmer
2023/03/31 Re: [Freesurfer] White matter exclusions occurring in v7.3.2 but not v5.3 Dierker, Donna
2023/03/31 [Freesurfer] R: Samseg lesion mask holes Cerri, Stefano,PHD
2023/03/31 Re: [Freesurfer] Is it possible to add additional T1 scans to improve surfaces/segmentation Michael Mc Laughlin
2023/03/31 Re: [Freesurfer] Is it possible to add additional T1 scans to improve surfaces/segmentation Glasser, Matt
2023/03/31 Re: [Freesurfer] Samseg lesion mask holes Evie Neylon
2023/03/31 Re: [Freesurfer] HPC Usage - Moving On from CentOS7 Horn, Mitchell Jacob
2023/03/30 Re: [Freesurfer] Which motion correction parameters are used in FSFAST? Andy Kim
2023/03/30 Re: [Freesurfer] HPC Usage - Moving On from CentOS7 fsbuild
2023/03/30 Re: [Freesurfer] Regressing out unconditioned stimulus Douglas N. Greve
2023/03/30 Re: [Freesurfer] kvlThresholdImage: command not found Nolan, Jackson
2023/03/30 Re: [Freesurfer] error with synthsr in Mac M1 Kumar, Avnish
2023/03/30 Re: [Freesurfer] Which motion correction parameters are used in FSFAST? Douglas N. Greve
2023/03/30 Re: [Freesurfer] Seed-based fcMRI: mean BOLD post nuisance regressor Douglas N. Greve
2023/03/30 [Freesurfer] (no subject) Rachel Wagner
2023/03/30 [Freesurfer] VMware: vmw_ioctl_command error Cannot allocate memory. BREUILLY MARINE
2023/03/30 Re: [Freesurfer] -gcareg dropped from -autorecon2-volonly Douglas N. Greve
2023/03/29 [Freesurfer] Tracula, trac-all, bug in interreg Tan Li Kuo
2023/03/29 Re: [Freesurfer] Autrecon-pial command Huang, Yujing
2023/03/29 [Freesurfer] Autrecon-pial command Carlos Alcocer
2023/03/29 [Freesurfer] error with synthsr in Mac M1 hmarz...@student.ubc.ca
2023/03/29 Re: [Freesurfer] Longitudinal processing of single time point data Huang, Yujing

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