External Email - Use Caution
Hello,
I am trying to run an old script from the ENIGMA webpage, that was based on
freesurfer 5.1 and uses tksurfer.
Here is a code excerpt:
tksurfer $sub lh pial -tcl tmp.tcl
echo "labl_import_annotation \"aparc.annot\"" > tmp.tcl
echo "scale_brain 1.35" >> tmp.tcl
echo "redraw" >> tmp.tcl
echo "save_tiff "$QCdir/$sub/"rh.lat.hr.tif" >> tmp.tcl
I have found that I could try to use tksurferfv instead, but then I get the
error message
“Option 'tcl' not recognized. Run 'freeview -h' for more information.”
Running 'freeview -h', I don’t find a solution.
Is there a workaround for that problem?
Thank you very much in advance.
Kind regards
Robert
Freesurfer Version: freesurfer-darwin-macOS-7.2.0-20210713-aa8f76b
Plattform: macOS Ventura v13.3.1
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Mass General Brigham
Compliance HelpLine at https://www.massgeneralbrigham.org/complianceline
<https://www.massgeneralbrigham.org/complianceline> .
Please note that this e-mail is not secure (encrypted). If you do not wish to
continue communication over unencrypted e-mail, please notify the sender of
this message immediately. Continuing to send or respond to e-mail after
receiving this message means you understand and accept this risk and wish to
continue to communicate over unencrypted e-mail.