External Email - Use Caution Hi Henry,
When you say regional image values, do you mean image intensity values? That could be it. I had expected they would refer to volume somehow, but that doesn't make sense because some larger regions have smaller means. Volume_mm3 StructName normMean normStdDev normMin normMax normRange 63156.2 Left-Cerebellum-Cortex 59.8986 10.1165 9.0000 97.0000 88.0000 9637.1 Left-Thalamus 86.9616 8.9621 32.0000 113.0000 81.0000 Michael On Thu, Jun 22, 2023 at 10:36 AM Tregidgo, Henry <h.tregi...@ucl.ac.uk> wrote: > External Email - Use Caution > > I believe these are describing the regional image values extracted from > the bias corrected and normalised input image. They give the mean, standard > deviation, minimum, maximum and range for each ROI. > > The relevant image should be saved as > $SUBJECT_DIR/subject_id/mri/norm.mgz. > > Hope this helps, > Henry > ------------------------------ > *From:* freesurfer-boun...@nmr.mgh.harvard.edu < > freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Michael Mc Laughlin < > mich...@thecurate.com> > *Sent:* 22 June 2023 05:08 > *To:* Freesurfer support list <freesurfer@nmr.mgh.harvard.edu> > *Subject:* Re: [Freesurfer] aseg stats meaning > > > ⚠ Caution: External sender > > External Email - Use Caution > > Does anyone know what the column headings: normMean normStdDev normMin > normMax normRange are telling us? > > > On Tue, Jun 20, 2023 at 3:23 PM Michael Mc Laughlin <mich...@thecurate.com> > wrote: > > That solves the Supratentorial volume question, but it doesn't > explain the normMean normStdDev normMin normMax normRange column > headings > > > On Tue, Jun 20, 2023 at 3:02 PM Douglas N. Greve <dgr...@mgh.harvard.edu> > wrote: > > External Email - Use Caution > > Does this page help *MailScanner has detected a possible fraud attempt > from "secure-web.cisco.com" claiming to be* > https://secure-web.cisco.com/1t8ZiRWhr4WNVxHYTaTnQ7m_OrMMuyAoNV3NVmupLGxlfJ33DhIK4ZCCfWufPHeaUumYMPKf5xkcj92RJvr1YQAqeY8PD53d_VlhyKQuUGzYzP95PV1MLIkZ6MKTujDbsbPnszdbe5gUI_XS8Ofb_cH0aNC5JydZwtKsdqSorsPJe8xvgq1XkO8H9dTWj2owPWyzNsu0NZajP5YAH96xeoP5y2NBJw5P3uP6h6a1NEsfq1nScuTjXs_utce4gWEdqDs35YAU3oDJNEz0QO4PjgPf5oXkmsf2DZzCr2wecqjRZlSDA5aGbUasAXZ8tRky6/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FMorphometryStats > <https://secure-web.cisco.com/1F-wDRZ7N3n2UO0k_9V0JZrkwhWS1FVP8cCUZYoUh25ndlvyFQgDD9X4npDMJnq4iG6sw8lzaUQ4txp3pKKKBdxgWGSfxrg_w7ayu_SZxSP6GFfAo03VLWZPJxQaB607tG_I_VHJKxYGkgxewRwM4mO8-XkQym0J1tNByGV1VIzLgqLmtz5KD6tC3Jw_TjN1igR_qRkKi1tO2yipx2cVMcTZLO6qSxs8WmQbqmhy1Pmrw5QKIn7Lhuf91Kz7rSNupNVS9bVMpMIj0uYPrGxgiMg/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FMorphometryStats> > ? > > On 6/20/2023 8:16 AM, Michael Mc Laughlin wrote: > > External Email - Use Caution > What do the numbers in these columns mean? I cannot find an explanation in > any of the documentation. > normMean normStdDev normMin normMax normRange > > Also, there are two rows labelled Supratentorial volume. Is one a typo? > > Supratentorial volume 1304730 mm^3 > Supratentorial volume 1228063 mm^3 > Michael McLaughlin, > > > > _______________________________________________ > Freesurfer mailing listfreesur...@nmr.mgh.harvard.edu*MailScanner has > detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* > https://secure-web.cisco.com/1taB0LKlwHdnoVmGg_HWU36xkX9vUGDFKAKb9wdvXo8etPT00gNYBYSOEuRmi4_0kQfjnZE13x7EmLaCRjHlgE8rptXWlFdGYI54kV5JOX5f8lOsxsdiUtWGbng1-OnUzEPaujaBTdOFDFTavazcdWCi5TS27xfphOdq3eXoq_iWkePrHUpH7xl8XP8HYB9HH1Hbe_kiY7CoGo05HzIr1NgC2mr2ZfETDA-RHG9OOJredWmRz4yGfIx1_z6hkGNfNUvcwLGPLNfVYmONLwyy4LFydnKIh1zKbyZazu--JnoilA5Bply6JTNrUINi5M4Ry/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer > > <https://secure-web.cisco.com/1S_qh1-2lLdPQ_JTj_DRiGnNelR9fq_3iVTf64ULBLHrXufyHTEBMkd9thVaWMdBZ21yU9YohsLaTZsbSZthHFW3MB3pMC99E-upcq4Ou3t35JEQWk3vm9tHGnLvMFuovJfOb7s-cq09ux7Kzjjm9lZPlCs08Fl83UP_anDkz3ScuaK1SU0QBVCvpTkNUr8rBwhOBgRmdYC_ImlOec5ZwA5rURxCyTpRJFav1fryQ80g4NJlFPg6Y-lqclZHRGRwS6bwqGBYrX4ikb-Aro7gTZA/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer> > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > *MailScanner has detected a possible fraud attempt from > "secure-web.cisco.com" claiming to be* > https://secure-web.cisco.com/1taB0LKlwHdnoVmGg_HWU36xkX9vUGDFKAKb9wdvXo8etPT00gNYBYSOEuRmi4_0kQfjnZE13x7EmLaCRjHlgE8rptXWlFdGYI54kV5JOX5f8lOsxsdiUtWGbng1-OnUzEPaujaBTdOFDFTavazcdWCi5TS27xfphOdq3eXoq_iWkePrHUpH7xl8XP8HYB9HH1Hbe_kiY7CoGo05HzIr1NgC2mr2ZfETDA-RHG9OOJredWmRz4yGfIx1_z6hkGNfNUvcwLGPLNfVYmONLwyy4LFydnKIh1zKbyZazu--JnoilA5Bply6JTNrUINi5M4Ry/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer > <https://secure-web.cisco.com/1Q0vVFqRI070lnr4cARpuBPKWFGEq05nZp0oAD-jTECwJgXP4zNMXH3LQtmLQtTMVghSUxrPhjFZuwNYTGk2cLakNyuORF-aVMW0IEiAFb9GeABnvli6UEuhOSyJ8kq5lnrxfvzV05eiJEz8qi2UhTT3enhruddxZ8X6x8b4ZrxjZ5gt0IALxYEIL1UaMjBiv-wPuTYtOJH1rJRo0FmpM4e_0qOWYlXtPP_Ibmx821E7jW_7qUMS47L7MbzUtN40i4mb6WFnc3KPI8o7avXvL84mGtZzUbwwhkCZss7gJGfhUrxmJx0_DrabKcpT-Spuo/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer> > The information in this e-mail is intended only for the person to whom it > is addressed. 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