bioc-devel  

Messages by Thread

• [Bioc-devel] Inquiry Regarding Landing Page Ali Mostafa
  • Re: [Bioc-devel] Inquiry Regarding Landing Page Jacques Serizay
  • Re: [Bioc-devel] Inquiry Regarding Landing Page Ali Mostafa
  • Re: [Bioc-devel] Inquiry Regarding Landing Page Kern, Lori via Bioc-devel
• [Bioc-devel] betaHMM problems reported in the Multiple platform build/check report for BioC 3.21 Koyel Majumdar
  • Re: [Bioc-devel] betaHMM problems reported in the Multiple platform build/check report for BioC 3.21 Kern, Lori via Bioc-devel
• [Bioc-devel] rmspc problems reported in the Multiple platform build/check report for BioC 3.20 Meriem Bahda
  • Re: [Bioc-devel] rmspc problems reported in the Multiple platform build/check report for BioC 3.20 Kern, Lori via Bioc-devel
  • Re: [Bioc-devel] rmspc problems reported in the Multiple platform build/check report for BioC 3.20 Jennifer Wokaty
  • Re: [Bioc-devel] rmspc problems reported in the Multiple platform build/check report for BioC 3.20 Meriem Bahda
  • Re: [Bioc-devel] rmspc problems reported in the Multiple platform build/check report for BioC 3.20 Jennifer Wokaty
  • Re: [Bioc-devel] rmspc problems reported in the Multiple platform build/check report for BioC 3.20 Meriem Bahda
  • [Bioc-devel] Fwd: rmspc problems reported in the Multiple platform build/check report for BioC 3.20 Meriem Bahda
  • Re: [Bioc-devel] rmspc problems reported in the Multiple platform build/check report for BioC 3.20 Kern, Lori via Bioc-devel
  • Re: [Bioc-devel] rmspc problems reported in the Multiple platform build/check report for BioC 3.20 Meriem Bahda
• [Bioc-devel] Not able to make changes to repository push to g...@git.bioconductor.org My Nguyen via Bioc-devel
  • Re: [Bioc-devel] Not able to make changes to repository push to g...@git.bioconductor.org Kern, Lori via Bioc-devel
• [Bioc-devel] Which remote branch to push changes to Richard Heery
  • Re: [Bioc-devel] Which remote branch to push changes to Kern, Lori via Bioc-devel
• [Bioc-devel] Package check errors Fwd: seqArchR problems reported in the Multiple platform build/check report for BioC 3.21 Sarvesh Nikumbh
  • Re: [Bioc-devel] Package check errors Fwd: seqArchR problems reported in the Multiple platform build/check report for BioC 3.21 Martin Grigorov
  • Re: [Bioc-devel] Package check errors Fwd: seqArchR problems reported in the Multiple platform build/check report for BioC 3.21 Jennifer Wokaty
  • Re: [Bioc-devel] Package check errors Fwd: seqArchR problems reported in the Multiple platform build/check report for BioC 3.21 Martin Grigorov
  • Re: [Bioc-devel] Package check errors Fwd: seqArchR problems reported in the Multiple platform build/check report for BioC 3.21 Martin Grigorov
• [Bioc-devel] FW: [EXTERNAL] SRAdb problems reported in the Multiple platform build/check report for BioC 3.21 Zhu, Jack (NIH/NCI) [E] via Bioc-devel
  • Re: [Bioc-devel] [EXTERNAL] SRAdb problems reported in the Multiple platform build/check report for BioC 3.21 Kern, Lori via Bioc-devel
  • Re: [Bioc-devel] [EXTERNAL] SRAdb problems reported in the Multiple platform build/check report for BioC 3.21 Zhu, Jack (NIH/NCI) [E] via Bioc-devel
  • Re: [Bioc-devel] [EXTERNAL] SRAdb problems reported in the Multiple platform build/check report for BioC 3.21 James W. MacDonald
  • Re: [Bioc-devel] [EXTERNAL] SRAdb problems reported in the Multiple platform build/check report for BioC 3.21 Sean Davis
  • Re: [Bioc-devel] [EXTERNAL] SRAdb problems reported in the Multiple platform build/check report for BioC 3.21 Zhu, Jack (NIH/NCI) [E] via Bioc-devel
• [Bioc-devel] Testing the srnadiff package with R CMD check takes lots of time Matthias Zytnicki
  • Re: [Bioc-devel] Testing the srnadiff package with R CMD check takes lots of time Vincent Carey
  • Re: [Bioc-devel] Testing the srnadiff package with R CMD check takes lots of time Matthias Zytnicki
• [Bioc-devel] Okay to push a hotfix for an existing release? Nanda, Pariksheet via Bioc-devel
  • Re: [Bioc-devel] Okay to push a hotfix for an existing release? Kern, Lori via Bioc-devel
  • Re: [Bioc-devel] Okay to push a hotfix for an existing release? Marcel Ramos
  • Re: [Bioc-devel] Okay to push a hotfix for an existing release? Nanda, Pariksheet via Bioc-devel
• [Bioc-devel] change of maintainer Michael Shapiro
  • Re: [Bioc-devel] change of maintainer Kern, Lori via Bioc-devel
• [Bioc-devel] Request to Add an Additional Developer to CRISPRseek on Bioconductor Zhu, Lihua (Julie) via Bioc-devel
  • Re: [Bioc-devel] Request to Add an Additional Developer to CRISPRseek on Bioconductor Kern, Lori via Bioc-devel
  • Re: [Bioc-devel] Request to Add an Additional Developer to CRISPRseek on Bioconductor Zhu, Lihua (Julie) via Bioc-devel
  • Re: [Bioc-devel] Request to Add an Additional Developer to CRISPRseek on Bioconductor Hu, Kai via Bioc-devel
• [Bioc-devel] Build error: missing downloadthis dependency Hiranyamaya Dash
  • Re: [Bioc-devel] Build error: missing downloadthis dependency Kern, Lori via Bioc-devel
• [Bioc-devel] Unable to push changes to g...@git.bioconductor.org:packages Brendan Miller
  • Re: [Bioc-devel] Unable to push changes to g...@git.bioconductor.org:packages Kern, Lori via Bioc-devel
• [Bioc-devel] New BioC 3.21 settings for R 4.5.0 Jennifer Wokaty
  • Re: [Bioc-devel] New BioC 3.21 settings for R 4.5.0 Kristian Ullrich
  • Re: [Bioc-devel] New BioC 3.21 settings for R 4.5.0 Hervé Pagès
  • Re: [Bioc-devel] New BioC 3.21 settings for R 4.5.0 Kristian Ullrich
  • Re: [Bioc-devel] New BioC 3.21 settings for R 4.5.0 Lluís Revilla
  • Re: [Bioc-devel] New BioC 3.21 settings for R 4.5.0 Kristian Ullrich
  • Re: [Bioc-devel] New BioC 3.21 settings for R 4.5.0 Kasper Daniel Hansen
• [Bioc-devel] Cannot trace "Warning" Matthias Zytnicki
  • Re: [Bioc-devel] Cannot trace "Warning" Kern, Lori via Bioc-devel
• [Bioc-devel] biocLite.R was removed in October 2024 Neumann, Steffen
• [Bioc-devel] Is it possible to reopen a closed issue on to push reviewed code for the next release ? Jean-Philippe Villemin
  • Re: [Bioc-devel] Is it possible to reopen a closed issue on to push reviewed code for the next release ? Kern, Lori via Bioc-devel
• [Bioc-devel] SurfR Enrichment_barplot git<->builder sync issues Aurora Maurizio
  • Re: [Bioc-devel] SurfR Enrichment_barplot git<->builder sync issues Kern, Lori via Bioc-devel
  • Re: [Bioc-devel] SurfR Enrichment_barplot git<->builder sync issues Aurora Maurizio
  • Re: [Bioc-devel] SurfR Enrichment_barplot git<->builder sync issues Kern, Lori via Bioc-devel
  • Re: [Bioc-devel] SurfR Enrichment_barplot git<->builder sync issues Aurora Maurizio
• [Bioc-devel] Bioconductor 3.20 is Released! Kern, Lori via Bioc-devel
• [Bioc-devel] RELEASE_3_20 branch is now available and push access is re-enabled Kern, Lori via Bioc-devel
• Re: [Bioc-devel] Last day to make commits before Bioconductor RELEASE 3.20 Samuel Granjeaud IR/Inserm
  • Re: [Bioc-devel] Last day to make commits before Bioconductor RELEASE 3.20 Kern, Lori via Bioc-devel
• [Bioc-devel] All commits to Bioconductor stopped from 7:00 am ET for release Kern, Lori via Bioc-devel
• [Bioc-devel] Issue with keras/tensorflow Nick Borcherding
  • Re: [Bioc-devel] Issue with keras/tensorflow Jennifer Wokaty
• [Bioc-devel] Policies regarding forked packages Ali Sajid Imami
  • Re: [Bioc-devel] Policies regarding forked packages Leonardo Collado Torres
  • Re: [Bioc-devel] Policies regarding forked packages Alexey Sergushichev
  • Re: [Bioc-devel] Policies regarding forked packages Henrik Bengtsson
  • Re: [Bioc-devel] Policies regarding forked packages Kern, Lori via Bioc-devel
  • Re: [Bioc-devel] Policies regarding forked packages Lluís Revilla
• [Bioc-devel] Last day to make commits before Bioconductor RELEASE 3.20 Kern, Lori via Bioc-devel
• [Bioc-devel] Announcing the GBCC2025 Logo Design Contest! Maria . Doyle
  • Re: [Bioc-devel] Announcing the GBCC2025 Logo Design Contest! Maria . Doyle
  • [Bioc-devel] Final Reminder: GBCC2025 Logo Design Contest Ends Dec 8! Maria . Doyle
• [Bioc-devel] DeepTarget error built in Linux (openEuler 22.03 LTS-SP1) / aarch64 Nguyen, Trinh (NIH/NCI) [C] via Bioc-devel
  • Re: [Bioc-devel] DeepTarget error built in Linux (openEuler 22.03 LTS-SP1) / aarch64 Martin Grigorov
  • Re: [Bioc-devel] [EXTERNAL] Re: DeepTarget error built in Linux (openEuler 22.03 LTS-SP1) / aarch64 Nguyen, Trinh (NIH/NCI) [C] via Bioc-devel
• [Bioc-devel] Important Bioconductor Release 3.20 Kern, Lori via Bioc-devel
• [Bioc-devel] WARNING on builders from rgl package Matteo Tiberti via Bioc-devel
  • Re: [Bioc-devel] WARNING on builders from rgl package Martin Grigorov
  • Re: [Bioc-devel] WARNING on builders from rgl package Matteo Tiberti via Bioc-devel
• [Bioc-devel] Guidance on Creating an Annotation Package for Heterorhabditis bacteriophora KABILAN S
  • Re: [Bioc-devel] Guidance on Creating an Annotation Package for Heterorhabditis bacteriophora James W. MacDonald
• [Bioc-devel] BayesSpace maintainership Matthew Stone
  • Re: [Bioc-devel] BayesSpace maintainership CoreTeam Bioconductor
  • Re: [Bioc-devel] BayesSpace maintainership Edward Zhao
• [Bioc-devel] Error on palomino8 Oleksii Nikolaienko
  • Re: [Bioc-devel] Error on palomino8 Hervé Pagès
• [Bioc-devel] arrow dependent packages fail to build on macOS Edward Zhao
  • Re: [Bioc-devel] arrow dependent packages fail to build on macOS Hervé Pagès
  • Re: [Bioc-devel] arrow dependent packages fail to build on macOS Edward Zhao
• [Bioc-devel] Kunpeng2 compilation error -lopenblas Morgan, Michael via Bioc-devel
  • Re: [Bioc-devel] Kunpeng2 compilation error -lopenblas Martin Grigorov
  • Re: [Bioc-devel] Kunpeng2 compilation error -lopenblas Morgan, Michael via Bioc-devel
• [Bioc-devel] ANCOMBC Package Error on Kunpeng2 Platform Huang Lin (Frederick)
  • Re: [Bioc-devel] ANCOMBC Package Error on Kunpeng2 Platform Kern, Lori via Bioc-devel
  • Re: [Bioc-devel] ANCOMBC Package Error on Kunpeng2 Platform Martin Grigorov
  • Re: [Bioc-devel] ANCOMBC Package Error on Kunpeng2 Platform Oleksii Nikolaienko
  • Re: [Bioc-devel] ANCOMBC Package Error on Kunpeng2 Platform Martin Grigorov
  • Re: [Bioc-devel] ANCOMBC Package Error on Kunpeng2 Platform Oleksii Nikolaienko
  • Re: [Bioc-devel] ANCOMBC Package Error on Kunpeng2 Platform Oleksii Nikolaienko
  • Re: [Bioc-devel] ANCOMBC Package Error on Kunpeng2 Platform Martin Grigorov
  • Re: [Bioc-devel] ANCOMBC Package Error on Kunpeng2 Platform Oleksii Nikolaienko
• Re: [Bioc-devel] groHMM problems reported in the Multiple platform build/check report for BioC 3.20 Tulip Nandu
  • Re: [Bioc-devel] groHMM problems reported in the Multiple platform build/check report for BioC 3.20 Tulip Nandu
  • Re: [Bioc-devel] groHMM problems reported in the Multiple platform build/check report for BioC 3.20 Marcel Ramos Pérez
  • Re: [Bioc-devel] groHMM problems reported in the Multiple platform build/check report for BioC 3.20 Tulip Nandu
  • Re: [Bioc-devel] groHMM problems reported in the Multiple platform build/check report for BioC 3.20 Marcel Ramos Pérez
• [Bioc-devel] Important Bioconductor Release 3.20 deadlines this week Kern, Lori via Bioc-devel
• [Bioc-devel] List of Deprecated Packages for Bioc3.20 Kern, Lori via Bioc-devel
• [Bioc-devel] Opportunity in Brazil for Carpentries Instructors and Bioconductor Presenters! Maria . Doyle
• [Bioc-devel] 3 unit tests skipped for CytoPipeline package on Bioc devel Philippe Hauchamps via Bioc-devel
  • Re: [Bioc-devel] 3 unit tests skipped for CytoPipeline package on Bioc devel Martin Morgan
  • Re: [Bioc-devel] 3 unit tests skipped for CytoPipeline package on Bioc devel Philippe Hauchamps via Bioc-devel
• [Bioc-devel] Review status of BulkSignalR Jean-Philippe Villemin
  • Re: [Bioc-devel] Review status of BulkSignalR Kern, Lori via Bioc-devel
• [Bioc-devel] Release_3_19 branch is now frozen Kern, Lori via Bioc-devel
• [Bioc-devel] Bioconductor CoC committee elections Anna Quaglieri
• [Bioc-devel] EpiCompare - Transfer maintainer Tom
  • Re: [Bioc-devel] EpiCompare - Transfer maintainer Kern, Lori via Bioc-devel
• [Bioc-devel] RELEASE_3_19 branch frozen in a few hours Kern, Lori via Bioc-devel
• [Bioc-devel] Important Release Deadline RELEASE_3_19 Freeze Kern, Lori via Bioc-devel
• [Bioc-devel] OrgDB entry for Homo sapiens and Mus musculus missing in AnnotationHub Alex Wong
  • Re: [Bioc-devel] OrgDB entry for Homo sapiens and Mus musculus missing in AnnotationHub Kern, Lori via Bioc-devel
  • Re: [Bioc-devel] OrgDB entry for Homo sapiens and Mus musculus missing in AnnotationHub Kern, Lori via Bioc-devel
• [Bioc-devel] registering on git as multtest package maintainer Katie Pollard via Bioc-devel
  • Re: [Bioc-devel] registering on git as multtest package maintainer Kern, Lori via Bioc-devel
• [Bioc-devel] pkgdown::build_site_github_pages fails with "Quarto articles require Bootstrap 5" Oleksii Nikolaienko
  • Re: [Bioc-devel] pkgdown::build_site_github_pages fails with "Quarto articles require Bootstrap 5" Jacques Serizay
  • Re: [Bioc-devel] pkgdown::build_site_github_pages fails with "Quarto articles require Bootstrap 5" Louis Le Nézet
  • Re: [Bioc-devel] pkgdown::build_site_github_pages fails with "Quarto articles require Bootstrap 5" Oleksii Nikolaienko
  • Re: [Bioc-devel] pkgdown::build_site_github_pages fails with "Quarto articles require Bootstrap 5" Oleksii Nikolaienko
• [Bioc-devel] Connection timed out error with push to Bioconductor Git server Richard Heery
  • Re: [Bioc-devel] Connection timed out error with push to Bioconductor Git server Kern, Lori via Bioc-devel
• [Bioc-devel] CatsCradle, recently accepted package Michael Shapiro
  • Re: [Bioc-devel] CatsCradle, recently accepted package Kern, Lori via Bioc-devel
• [Bioc-devel] Review status of CARDspa package Jing Fu
  • Re: [Bioc-devel] Review status of CARDspa package Kern, Lori via Bioc-devel
• [Bioc-devel] Bioconductor 3.20 db0s, OrgDbs, and TxDbs now available Kern, Lori via Bioc-devel
• [Bioc-devel] New Contribution Trouble with Git/GitHub Sagendorf, Tyler J via Bioc-devel
  • Re: [Bioc-devel] New Contribution Trouble with Git/GitHub Kern, Lori via Bioc-devel
  • Re: [Bioc-devel] New Contribution Trouble with Git/GitHub Sagendorf, Tyler J via Bioc-devel
• [Bioc-devel] Add additional maintainer to R package Goldberg, David (NGG) via Bioc-devel
  • Re: [Bioc-devel] Add additional maintainer to R package Kern, Lori via Bioc-devel
• [Bioc-devel] crupR submission re-activation? Persia Akbari Omgba
• [Bioc-devel] ChemmineOB build failures Kevin Horan
  • Re: [Bioc-devel] ChemmineOB build failures Jennifer Wokaty
  • Re: [Bioc-devel] ChemmineOB build failures Kevin Horan
  • Re: [Bioc-devel] ChemmineOB build failures Kevin Horan
  • Re: [Bioc-devel] ChemmineOB build failures Jennifer Wokaty
• [Bioc-devel] Opportunity for Carpentries Instructors to Teach Bioconductor in Africa Maria . Doyle
• [Bioc-devel] Build error: missing perl xml module Spencer Nystrom
  • Re: [Bioc-devel] Build error: missing perl xml module Jennifer Wokaty
  • Re: [Bioc-devel] Build error: missing perl xml module Spencer Nystrom
• [Bioc-devel] file 'HilbertCurve/DESCRIPTION' does not exist Zuguang Gu
  • Re: [Bioc-devel] file 'HilbertCurve/DESCRIPTION' does not exist Jennifer Wokaty
  • Re: [Bioc-devel] file 'HilbertCurve/DESCRIPTION' does not exist Henrik Bengtsson
  • Re: [Bioc-devel] file 'HilbertCurve/DESCRIPTION' does not exist Zuguang Gu
• [Bioc-devel] Symbolic links to ExperimentHub files on Windows Richard Heery
  • Re: [Bioc-devel] Symbolic links to ExperimentHub files on Windows Kern, Lori via Bioc-devel
• [Bioc-devel] Request un-deprecation of bioconductor package TnT Jialin Ma via Bioc-devel
  • Re: [Bioc-devel] Request un-deprecation of bioconductor package TnT Kern, Lori via Bioc-devel
• [Bioc-devel] Request to be added as Maintainer for SingleCellSignalR Package Jean-Philippe Villemin
  • Re: [Bioc-devel] Request to be added as Maintainer for SingleCellSignalR Package Lluís Revilla
• [Bioc-devel] bioc-issue closed but still in "awaiting moderation" status Jean-Philippe Villemin
  • Re: [Bioc-devel] bioc-issue closed but still in "awaiting moderation" status Kern, Lori via Bioc-devel
• [Bioc-devel] bioc-issue-bot delay Martha M
  • Re: [Bioc-devel] bioc-issue-bot delay Kern, Lori via Bioc-devel
  • Re: [Bioc-devel] bioc-issue-bot delay Kern, Lori via Bioc-devel
• [Bioc-devel] Single Package Builder for New Package Submission Offline for Updates Jennifer Wokaty
• [Bioc-devel] Online Courses: ML for Computational Biology and DNA Methylation Michael Zyphur via Bioc-devel
• [Bioc-devel] Save the Date for EuroBioC2025 in Barcelona! Maria . Doyle
• [Bioc-devel] Announcing GBCC 2025: The first joint conference between Bioconductor & Galaxy! Maria . Doyle
• [Bioc-devel] Build fails for Moonlight2R Matteo Tiberti via Bioc-devel
  • Re: [Bioc-devel] Build fails for Moonlight2R Kern, Lori via Bioc-devel
  • Re: [Bioc-devel] Build fails for Moonlight2R Matteo Tiberti via Bioc-devel
  • Re: [Bioc-devel] Build fails for Moonlight2R Matteo Tiberti via Bioc-devel
• [Bioc-devel] Vignette building timing out Philipp Angerer
  • Re: [Bioc-devel] Vignette building timing out Wolfgang Huber
  • Re: [Bioc-devel] Vignette building timing out Philipp Angerer
  • Re: [Bioc-devel] Vignette building timing out Kern, Lori via Bioc-devel
• [Bioc-devel] BioCAsia 2024 Registration Now Open! Maria . Doyle
  • [Bioc-devel] BioC Asia 2024 - Conference Access Award Available Maria . Doyle
• [Bioc-devel] Bioconductor 3.20 Release Schedule Kern, Lori via Bioc-devel
• [Bioc-devel] support.bioconductor.org very slow Gordon Smyth via Bioc-devel
  • Re: [Bioc-devel] support.bioconductor.org very slow Wolfgang Huber
  • Re: [Bioc-devel] support.bioconductor.org very slow Michael Love
  • Re: [Bioc-devel] support.bioconductor.org very slow Vincent Carey
• [Bioc-devel] Error in SVMDO Package MUSTAFA ERHAN ÖZER via Bioc-devel
  • Re: [Bioc-devel] Error in SVMDO Package Vinh Tran
  • Re: [Bioc-devel] Error in SVMDO Package Vincent Carey
  • Re: [Bioc-devel] Error in SVMDO Package MUSTAFA ERHAN ÖZER via Bioc-devel
  • Re: [Bioc-devel] Error in SVMDO Package Kern, Lori via Bioc-devel

• Earlier messages
• Later messages