Thank you for the clarification Lori, we'll update the package as soon as we can to use the latest version of .NET.
Best, Meriem Le mar. 28 janv. 2025 à 07:15, Kern, Lori <lori.sheph...@roswellpark.org> a écrit : > Yes that is correct. It is Bioconductor's policy that packages should > work with the up-to-date versions of system dependencies to ensure security > and maintenance. As Jennifer pointed out support for .NET 6.0 ended > November 12, 2024. You will need to update to work with .NET 8.0 on the > devel nebbiolo1 machine. > > > Lori Shepherd - Kern > > Bioconductor Core Team > > Roswell Park Comprehensive Cancer Center > > Department of Biostatistics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > ------------------------------ > *From:* Meriem Bahda <meriemba...@gmail.com> > *Sent:* Tuesday, January 28, 2025 2:09 AM > *To:* Jennifer Wokaty <jennifer.wok...@sph.cuny.edu> > *Cc:* bioc-devel@r-project.org <bioc-devel@r-project.org>; Kern, Lori > <lori.sheph...@roswellpark.org> > *Subject:* Re: [Bioc-devel] rmspc problems reported in the Multiple > platform build/check report for BioC 3.20 > > Hi Jennifer, > > The package is still failing in *nebbiolo1.* > > To confirm, .NET6 will not be installed in nebbiolo1, we will have to > update the version of .NET of the package if we want it to work or > nebbiolo1, right ? > > Thank you, > Meriem > > Le jeu. 26 déc. 2024 à 12:51, Jennifer Wokaty < > jennifer.wok...@sph.cuny.edu> a écrit : > > I did install .NET on another machine. According to the latest reports, > only the Linux devel server nebbiolo1 is failing for rmspc. > > Jennifer Wokaty (they/them) > > Waldron Lab at CUNY SPH > Bioconductor Core Team > ------------------------------ > *From:* Meriem Bahda <meriemba...@gmail.com> > *Sent:* Thursday, December 26, 2024 12:09 PM > *To:* Jennifer Wokaty <jennifer.wok...@sph.cuny.edu> > *Cc:* bioc-devel@r-project.org <bioc-devel@r-project.org>; Kern, Lori < > lori.sheph...@roswellpark.org> > *Subject:* Re: [Bioc-devel] rmspc problems reported in the Multiple > platform build/check report for BioC 3.20 > > Thank you, Jennifer. We will look into updating the package with a newer > version of .NET when we have a chance. > > I am still receiving emails about the package failing in other hosts. Will > that be solved too in the meantime? > > Thank you, > Meriem > > Le lun. 23 déc. 2024 à 18:14, Jennifer Wokaty < > jennifer.wok...@sph.cuny.edu> a écrit : > > Hi, > > Looking at https://dotnet.microsoft.com/en-us/download/dotnet > <https://secure-web.cisco.com/1UGUZKO3kbsDaxGXpTEinn9z-pG8Wh2PPQzSClqdBpMHiuOWa_dGkTxMlSAh1g_E97WePoDJRP_Qk8b14Fk9BDD_3Ej19ZYFYmNpI4l5PtHGpCOJJpEGUFlwxHdnxGuuxMY0UQ3DuH3db1m7cWjuKEyYcWs2D3rOYXlD9l9Y1EAyWqGTY-e0TWYDZwxQ8H1v_QmV0FKTZCCixyqArvI_ugyr0I9DhCRd9t-hkilRYDXLi4qSscgV_6r_yTj1b4kZC4K1dTjmFqrIr5IvgXVaPSZnbygt7JfrLrhi5V9GgpGGjYRQ4qLGkVcHVQGT4AenJ/https%3A%2F%2Furldefense.com%2Fv3%2F__https%3A%2F%2Fdotnet.microsoft.com%2Fen-us%2Fdownload%2Fdotnet__%3B%21%21LRXxDv2l%21Sljhs8ptYBWw-1a2n2QMdusKwxEqyDmRC2dJJgTm06qjXZfGYky21uS9979K_LhdR7UxJAoP8-1goEwqX3AAw2FksJ-FXtI%24>, > support for .NET 6.0 ended November 12, 2024. While .NET 6.0 is available > in the Ubuntu backports repository, please consider updating rmspc to work > with a currently supported version of .NET. > > In the meantime, I've installed .NET 6.0 on our release Linux server and > left .NET 8.0 on our devel Linux server, which is available via the Ubuntu > repository by default as you may want to consider as a replacement. > > Jennifer Wokaty (they/them) > > Waldron Lab at CUNY SPH > Bioconductor Core Team > ------------------------------ > *From:* Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of Kern, > Lori via Bioc-devel <bioc-devel@r-project.org> > *Sent:* Tuesday, December 17, 2024 7:07 AM > *To:* Meriem Bahda <meriemba...@gmail.com>; bioc-devel@r-project.org < > bioc-devel@r-project.org> > *Subject:* Re: [Bioc-devel] rmspc problems reported in the Multiple > platform build/check report for BioC 3.20 > > * This email originates from a sender outside of CUNY. Verify the sender > before replying or clicking on links and attachments. * > > Our system administrator is currently out of office. When they return we > will look into this. > > > Lori Shepherd - Kern > > Bioconductor Core Team > > Roswell Park Comprehensive Cancer Center > > Department of Biostatistics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > > ________________________________ > From: Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of Meriem > Bahda <meriemba...@gmail.com> > Sent: Monday, December 16, 2024 8:37 PM > To: bioc-devel@r-project.org <bioc-devel@r-project.org> > Subject: [Bioc-devel] rmspc problems reported in the Multiple platform > build/check report for BioC 3.20 > > Dear Community, > > I submitted a recent version of the package rmspc to Bioconductor a year > ago, to upgrade it. A prerequisite for the rmspc package is .NET 6.0. > Before installing the rmspc package, the program .NET 6.0. should already > be installed on the user's computer. > > I recently received an email saying the package didn't pass the platform > build check for the host *nebbiolo2*. I believe this error may have > occurred because .NET 6.0 isn't installed on this platform. > > Thank you for your help! > > -- > > *Meriem BAHDA* > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioc-devel@r-project.org mailing list > > https://urldefense.com/v3/__https://secure-web.cisco.com/1ZjGFKCxDOKWNESzdBW-PjmfpxyX5ImyAp0tJEhu0ypGQfmLxrQzZ2sOfAh9v8Pz88mX067Pe8wNbFZ6OF11Rk-V9pGMxL4moiOJFGPxZ4Yc97L6yW5S5LzdmIdAvuWQv0bs4hLICFcm_k4i4qy62tFDC4np3MGuniqF1MUYqmK-1mwgayvmfKY_9rxCDvEKzuFiWQ95tNr3GIdIMWEDG4HjbsTUp-7LeQ5yYUqTPXE9nrp8N8v7hU3eUpRw9JKBD5cffkQydgvX4P6q5XILml-jvJAgd75Kd0MeKWBoE_I8DcX_Jhbliwhge-QkQG889/https*3A*2F*2Fstat.ethz.ch*2Fmailman*2Flistinfo*2Fbioc-devel__;JSUlJSUl!!LRXxDv2l!WkHDBnEXwZN57f7OrJ26LaBGZ-vafdg-tuWs0Cujycoz8s3UQdUUBUFSEyq2z-C20FL6BWVgsmPWLrJm0uf_pkJR9hvbnfDXpA$ > <https://secure-web.cisco.com/1_ldnpEKrqmsFvk9_t2Su2QrUdNYGLDi4_IgoATvmXxLL-jNb2UOzETGPhLZiToLQ4Hw0BeMZc7k9tqo7MuEwrhe7OIEqPidDyDYRML-xUfqNrnt8TvuEueVRYXcpjPbI6x5oQZILw-rKhxO7KEq3gL3WIKlpa7AYzP5TNVHPmVbM-UJXbkXryK5nkAw1oxama1yh5MoQqbdtBqTL4O0QJZaD9Hmug3Y36BbOzC-VQ08u8M17bH47zXaIRZVr_u8lmaRWSLB9BmBW45VklfSaMfl0QhAZFVaUF3sMpL78VK-JCRJ1raOMkq5ej78TfPb7/https%3A%2F%2Furldefense.com%2Fv3%2F__https%3A%2F%2Fsecure-web.cisco.com%2F1ZjGFKCxDOKWNESzdBW-PjmfpxyX5ImyAp0tJEhu0ypGQfmLxrQzZ2sOfAh9v8Pz88mX067Pe8wNbFZ6OF11Rk-V9pGMxL4moiOJFGPxZ4Yc97L6yW5S5LzdmIdAvuWQv0bs4hLICFcm_k4i4qy62tFDC4np3MGuniqF1MUYqmK-1mwgayvmfKY_9rxCDvEKzuFiWQ95tNr3GIdIMWEDG4HjbsTUp-7LeQ5yYUqTPXE9nrp8N8v7hU3eUpRw9JKBD5cffkQydgvX4P6q5XILml-jvJAgd75Kd0MeKWBoE_I8DcX_Jhbliwhge-QkQG889%2Fhttps%2A3A%2A2F%2A2Fstat.ethz.ch%2A2Fmailman%2A2Flistinfo%2A2Fbioc-devel__%3BJSUlJSUl%21%21LRXxDv2l%21WkHDBnEXwZN57f7OrJ26LaBGZ-vafdg-tuWs0Cujycoz8s3UQdUUBUFSEyq2z-C20FL6BWVgsmPWLrJm0uf_pkJR9hvbnfDXpA%24> > > > > This email message may contain legally privileged and/or confidential > information. If you are not the intended recipient(s), or the employee or > agent responsible for the delivery of this message to the intended > recipient(s), you are hereby notified that any disclosure, copying, > distribution, or use of this email message is prohibited. If you have > received this message in error, please notify the sender immediately by > e-mail and delete this email message from your computer. Thank you. > [[alternative HTML version deleted]] > > _______________________________________________ > Bioc-devel@r-project.org mailing list > > https://urldefense.com/v3/__https://stat.ethz.ch/mailman/listinfo/bioc-devel__;!!LRXxDv2l!WkHDBnEXwZN57f7OrJ26LaBGZ-vafdg-tuWs0Cujycoz8s3UQdUUBUFSEyq2z-C20FL6BWVgsmPWLrJm0uf_pkJR9hurr9_yQQ$ > <https://secure-web.cisco.com/15TujVSO1rBfZAywRmvXnn_k9fLp-pl5qaiZnrWx82kHNdPc48UEOtVgqIMoDka8xxWz9iKURRSM0yUdDM_9qVljgJl0ek-VRFnD25f52NgIN3XrCVb9dzM60BEAVmOrz5E5P7M_GRrUr2slUOKhyB6vFDBkQteZFbYuLx_d-z1jcZISw8HmOKdRqFU3bZFucJ-x375iwC8qoyCnBRpr8RUQtCZkQvGkmwbj6zCSQHKYgsEhKCzDupiZJuCZw0LMbCyjDSFZ7b1CNMtokQNaj8PGM7HAKMzdIjBKUw93y95QyxPH-AAtOmyEM4YGySry6/https%3A%2F%2Furldefense.com%2Fv3%2F__https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel__%3B%21%21LRXxDv2l%21WkHDBnEXwZN57f7OrJ26LaBGZ-vafdg-tuWs0Cujycoz8s3UQdUUBUFSEyq2z-C20FL6BWVgsmPWLrJm0uf_pkJR9hurr9_yQQ%24> > > > > -- > > *Meriem BAHDA * > > > > > This email message may contain legally privileged and/or confidential > information. If you are not the intended recipient(s), or the employee or > agent responsible for the delivery of this message to the intended > recipient(s), you are hereby notified that any disclosure, copying, > distribution, or use of this email message is prohibited. If you have > received this message in error, please notify the sender immediately by > e-mail and delete this email message from your computer. Thank you. > -- *Meriem BAHDA* [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
