Thanks Robert. Nice to have someone in the same boat :)
I'll sit tight for now in case it just goes away.
Paul
On 26/02/25 15:05, Robert M. Flight wrote:
You don't often get email from rfligh...@gmail.com. Learn why this is
important <https://aka.ms/LearnAboutSenderIdentification>
Hi Paul,
I got a similar email about failures for my package (categoryCompare),
but only on Linux, that also seem to be due to Rgraphviz failing to
compile and install on the Linux machines.
I'm assuming whatever is causing Rgraphviz to not compile on Linux will
be hopefully fixed sooner rather than later.
-Robert
On Tue, Feb 25, 2025 at 6:35 PM Paul Murrell <p...@stat.auckland.ac.nz
<mailto:p...@stat.auckland.ac.nz>> wrote:
Hi
I got an automated email about build/check failures for my 'hyperdraw'
package, but the error logs show that the failure is because
'Rgraphviz'
is "not available" ...
https://bioconductor.org/checkResults/3.21/bioc-LATEST/hyperdraw/nebbiolo1-buildsrc.html
<https://bioconductor.org/checkResults/3.21/bioc-LATEST/hyperdraw/nebbiolo1-buildsrc.html>
Is my error report just a cascade from 'Rgraphviz' errors?
I see that 'Rgraphviz' is producing Warnings, but otherwise appears to
be ok (although that is for 3.20 rather than 3.21) ...
https://bioconductor.org/checkResults/3.20/bioc-LATEST/Rgraphviz/nebbiolo2-checksrc.html
<https://bioconductor.org/checkResults/3.20/bioc-LATEST/Rgraphviz/nebbiolo2-checksrc.html>
I do not see 'Rgraphviz' on the list of removed packages ...
https://bioconductor.org/about/removed-packages/
<https://bioconductor.org/about/removed-packages/>
With 'Rgraphviz' (and other dependencies) installed I can build
'hyperdraw' fine using Bioc settings with both r-release and r-devel ...
R_ENVIRON_USER=~/.Renviron.bioc R CMD build ../hyperdraw
Thanks for any suggestions.
Paul
--
Dr Paul Murrell (he/him)
Te Kura Tatauranga | Department of Statistics
Waipapa Taumata Rau | The University of Auckland
Private Bag 92019, Auckland 1142, New Zealand
64 9 3737599 x85392
p...@stat.auckland.ac.nz <mailto:p...@stat.auckland.ac.nz>
www.stat.auckland.ac.nz/~paul/ <http://www.stat.auckland.ac.nz/~paul/>
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--
Dr Paul Murrell (he/him)
Te Kura Tatauranga | Department of Statistics
Waipapa Taumata Rau | The University of Auckland
Private Bag 92019, Auckland 1142, New Zealand
64 9 3737599 x85392
p...@stat.auckland.ac.nz
www.stat.auckland.ac.nz/~paul/
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