We do not sync github repositories automatically. You will need to push your changes to git.bioconductor.org. The repository on our git server is the only version Bioconductor knows/propagates. A new version will not propagate without a valid version bump as well.
Please see https://contributions.bioconductor.org/git-version-control.html Lori Shepherd - Kern Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 ________________________________ From: Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of Aurora Maurizio <auroramauriz...@gmail.com> Sent: Friday, November 1, 2024 7:05 AM To: bioc-devel@r-project.org <bioc-devel@r-project.org>; jennifer.wok...@sph.cuny.edu <jennifer.wok...@sph.cuny.edu> Subject: [Bioc-devel] SurfR Enrichment_barplot git<->builder sync issues Dear all, I've noticed a discrepancy between the SurfR package functions on GitHub (both the devel and RELEASE_3_20 branches) and those checked on the builder. Specifically, the Enrichment_barplot function, which is causing errors on several builders, has been updated recently. I rewrote the Example of this function a few weeks ago (including also commenting it). Still, the updated function on GitHub (linked here: GitHub RELEASE_3_20 <https://secure-web.cisco.com/1cDlDmIhDitmf7EgCo7pvDt_4Xa0FvvcCrE3IOguFGVI54jktX5xJLx8oQYcNwbZevh91io-9EzRAFyOlBo5c9Xcmyvn32KWyn9uXzOHFaQrXJcAJBilGoT4wTuRBqRUZ2aQg8QXbhluxJ7WNGUYi4-2fXJmyPM_OKIVKd2sbZasLdqY3AH8XmDftXYKPYwVE-vhpzVePNgqpHwTUKL212TkaqWoAb3ejGzcaxZUZBY5pSXTID3e6yHdfO4Y_dPKP57V-8zF4FiKppzTOoZ_BjQiRYFLO8cq8TqAj0woW5xBEuNfK7-LUnKfiKxL5daSJSrS6scuHRCcakZovK5hRKA/https%3A%2F%2Fgithub.com%2Fauroramaurizio%2FSurfR%2Fblob%2FRELEASE_3_20%2FR%2FEnrichment_barplot.R>) is quite different from the old version that is causing errors in the build checks (see builder error <https://secure-web.cisco.com/1Ux_1GklNVCJzRM3BolzqjOFWciPZdo85Jr-yN58RY8kdUVyqdLPms7K1Rltm2awA___e7ymqw2T5t8Gp7qEzyXMu1d8yw23Y0n0Hc8PmVWwrSApIvM_ANaIRtYMheBae8O2vTx0MDklofe0WwgJxM0dQe-6_wzq7Y9y_xqXx7X4_Ig4BSXaQ9-0Y3cxAkNElxdtApxr4tKWwLb2XSjZ-dKj2zTNnL7FU8ByEyuvHorxWV5vxw-EuVZiD8uAsp49bb0PrMl2uy9V4yMn5dATDxXakMG_YMLCZ_qMWAopCs0CrYO_1FEL9-6n7dBZLcSRd/https%3A%2F%2Fbioconductor.org%2FcheckResults%2F3.20%2Fbioc-LATEST%2FSurfR%2Fteran2-checksrc.html> ). Could you please assist me in resolving this synchronization issue? Thank you very much for your help. Best regards, Aurora [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://secure-web.cisco.com/1v2m-LAemqN38vBF8lhNIKOUWbAoe7YpYQUDuOU8R8ThgtRj0E62XjJ2__7v9kv3iTqI6cHnaVDc8AZjIizEkT_7d8AC3_juJUsfLM5wzRtSqAJbQi3dlmgh6EXUH-wU_QAU_MJ6QrmGvoZ4cWrKrGzysQu7tJYRvQf5PjqMI5VGFyC9sKNcc-pBD0CU7fio7TneIulKulEtULqOX_DvtCvXyTxSxZOo9Fe5TYBzyyCD69Z1XUmu_TlMdvwlOIS4SzyR_G0PIxAyEf9VGtj1fIO1XGlpZd7qLaqG8w2bxb5TOY5I4qGXsVOg4rdJ6OWR_/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
