Hi, All builds passing now, except for an issue with kunpeng2, which I'm discussing with Martin on #arm-linux on the community Slack. I may invite you to join us there if we get stuck.
Jennifer Wokaty (they/them) Waldron Lab at CUNY SPH Bioconductor Core Team ________________________________ From: Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of Martin Grigorov <mgrigo...@apache.org> Sent: Monday, December 9, 2024 3:34 AM To: Sarvesh Nikumbh <sarvesh.niku...@gmail.com> Cc: Bioc-devel <bioc-devel@r-project.org> Subject: Re: [Bioc-devel] Package check errors Fwd: seqArchR problems reported in the Multiple platform build/check report for BioC 3.21 * This email originates from a sender outside of CUNY. Verify the sender before replying or clicking on links and attachments. * Hi, This issue should be fixed on kunpeng2 in the next build run (the results will be available two days from now). Regards, Martin On Tue, Dec 3, 2024 at 7:58 PM Sarvesh Nikumbh <sarvesh.niku...@gmail.com> wrote: > Dear Bioc team, > > I am seeing check errors on nebbiolo1 and palomino7 and build and install > error on kunpeng2 for my package "seqArchR". The check errors are due to > the missing Python module scikit-learn, and others are due to dependencies > not being available. I believe this is being looked into by the team. > Please let me know if you need anything from my side to get this resolved. > > Thanks and best wishes, > Sarvesh > > > ---------- Forwarded message --------- > From: <bbs-nore...@bioconductor.org> > Date: Tue, 3 Dec 2024 at 22:30 > Subject: seqArchR problems reported in the Multiple platform build/check > report for BioC 3.21 > To: <sarvesh.niku...@gmail.com> > > > [This is an automatically generated email. Please don't reply.] > > Hi seqArchR maintainer, > > According to the Multiple platform build/check report for BioC 3.21, > the seqArchR package has the following problem(s): > > o ERROR for 'R CMD check' on nebbiolo1. See the details here: > > > https://urldefense.com/v3/__https://bioconductor.org/checkResults/3.21/bioc-LATEST/seqArchR/nebbiolo1-checksrc.html__;!!LRXxDv2l!SAm81ssftyYCFtEnWDLRGhmNLFYQviFOkWffrugLy_nNcfjwOCASVtR1LMdj9ZYFn9I03NRsIbuvToqCRon2i_GuHmcXzA$ > > Please take the time to address this by committing and pushing > changes to your package at git.bioconductor.org > > Notes: > > * This was the status of your package at the time this email was sent to > you. > Given that the online report is updated daily (in normal conditions) > you > could see something different when you visit the URL(s) above, > especially if > you do so several days after you received this email. > > * It is possible that the problems reported in this report are false > positives, > either because another package (from CRAN or Bioconductor) breaks your > package (if yours depends on it) or because of a Build System problem. > If this is the case, then you can ignore this email. > > * Please check the report again 24h after you've committed your changes > to the > package and make sure that all the problems have gone. > > * If you have questions about this report or need help with the > maintenance of your package, please use the Bioc-devel mailing list: > > > https://urldefense.com/v3/__https://bioconductor.org/help/mailing-list/__;!!LRXxDv2l!SAm81ssftyYCFtEnWDLRGhmNLFYQviFOkWffrugLy_nNcfjwOCASVtR1LMdj9ZYFn9I03NRsIbuvToqCRon2i_GWDRO4ew$ > > (all package maintainers are requested to subscribe to this list) > > For immediate notification of package build status, please > subscribe to your package's RSS feed. Information is at: > > https://urldefense.com/v3/__https://bioconductor.org/developers/rss-feeds/__;!!LRXxDv2l!SAm81ssftyYCFtEnWDLRGhmNLFYQviFOkWffrugLy_nNcfjwOCASVtR1LMdj9ZYFn9I03NRsIbuvToqCRon2i_HCYkxsMQ$ > > Thanks for contributing to the Bioconductor project! > > > > -- > > thanks! > -Sarvesh > > -------------------------------------------- > Q: Why is this email five sentences or less? > A: > https://urldefense.com/v3/__http://five.sentenc.es__;!!LRXxDv2l!SAm81ssftyYCFtEnWDLRGhmNLFYQviFOkWffrugLy_nNcfjwOCASVtR1LMdj9ZYFn9I03NRsIbuvToqCRon2i_HhFiC8nA$ > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://urldefense.com/v3/__https://stat.ethz.ch/mailman/listinfo/bioc-devel__;!!LRXxDv2l!SAm81ssftyYCFtEnWDLRGhmNLFYQviFOkWffrugLy_nNcfjwOCASVtR1LMdj9ZYFn9I03NRsIbuvToqCRon2i_GRPrF1nw$ > [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://urldefense.com/v3/__https://stat.ethz.ch/mailman/listinfo/bioc-devel__;!!LRXxDv2l!SAm81ssftyYCFtEnWDLRGhmNLFYQviFOkWffrugLy_nNcfjwOCASVtR1LMdj9ZYFn9I03NRsIbuvToqCRon2i_GRPrF1nw$ [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
