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• • [Freesurfer] Issue with Voxel Size Mismatch in Samseg-Long Pipeline Taghizadeh Mortezaei, Nima
• [Freesurfer] Research assistant position in Saygin developmental cognitive neuroscience lab Saygin, Zeynep
• [Freesurfer] histo atlas and sTIV Antonio Napolitano
  • Re: [Freesurfer] histo atlas and sTIV Iglesias Gonzalez, Juan E.
  • Re: [Freesurfer] histo atlas and sTIV Douglas N. Greve
• Re: [Freesurfer] [EXTERNAL] Re: Recon-all error - release 8.0.0-beta fsbuild
• [Freesurfer] Recon-all error - release 8.0.0-beta Yanez-Ramos, Lupita
  • Re: [Freesurfer] Recon-all error - release 8.0.0-beta Huang, Yujing
  • Re: [Freesurfer] Recon-all error - release 8.0.0-beta fsbuild
  • Re: [Freesurfer] [EXTERNAL] Re: Recon-all error - release 8.0.0-beta Yanez-Ramos, Lupita
• [Freesurfer] convert aal3 into .annot file Vianney Salvi
• [Freesurfer] Cortical Thickness Extraction after Dura Correction with Multi-echo MPRAGE KEITH JONES
• [Freesurfer] Inquiry About Longitudinal Analysis Using recon-all-clinical.sh Taghizadeh Mortezaei, Nima
  • [Freesurfer] Inquiry About Longitudinal Analysis Using recon-all-clinical.sh Taghizadeh Mortezaei, Nima
  • Re: [Freesurfer] Inquiry About Longitudinal Analysis Using recon-all-clinical.sh Taghizadeh Mortezaei, Nima
  • Re: [Freesurfer] Inquiry About Longitudinal Analysis Using recon-all-clinical.sh Iglesias Gonzalez, Juan E.
• [Freesurfer] freeview runtime error... Gonzalo Rojas Costa
  • Re: [Freesurfer] freeview runtime error... fsbuild
  • [Freesurfer] freeview runtime error... Gonzalo Rojas Costa
  • Re: [Freesurfer] freeview runtime error... fsbuild
  • Re: [Freesurfer] freeview runtime error... Gonzalo Rojas Costa
  • Re: [Freesurfer] freeview runtime error... fsbuild
  • Re: [Freesurfer] freeview runtime error... Gonzalo Rojas Costa
• [Freesurfer] ROI analysis in the MNI305 space neda afzalian
  • Re: [Freesurfer] ROI analysis in the MNI305 space Douglas N. Greve
• Re: [Freesurfer] [EXTERNE-EMAIL] Re: mri_synthSR on a virtual machine. Graph execution error fsbuild
  • Re: [Freesurfer] [EXTERNE-EMAIL] Re: [EXTERNE-EMAIL] Re: mri_synthSR on a virtual machine. Graph execution error Zito Giuseppe
• [Freesurfer] windows-based software to read freesurfer images... Gonzalo Rojas Costa
  • Re: [Freesurfer] windows-based software to read freesurfer images... Douglas N. Greve
• [Freesurfer] Problem with FreeSurfer 8.0 Sahil Bajaj
  • Re: [Freesurfer] Problem with FreeSurfer 8.0 fsbuild
• [Freesurfer] mris_pmake for calculating surface distances between peak vertices and creating vertex ROIs Fanton, Silvia
• [Freesurfer] recon-all: aparc+aseg.mgz missing labels tomjandr...@sky.com
  • Re: [Freesurfer] recon-all: aparc+aseg.mgz missing labels Douglas N. Greve
• [Freesurfer] mri_synthSR on a virtual machine. Graph execution error Zito Giuseppe
  • Re: [Freesurfer] mri_synthSR on a virtual machine. Graph execution error fsbuild
  • Re: [Freesurfer] [EXTERNE-EMAIL] Re: mri_synthSR on a virtual machine. Graph execution error Zito Giuseppe
• Re: [Freesurfer] recon-all failed with FreeSurfer v8.0.0 (beta) on Mac fsbuild
• [Freesurfer] Compute Cortical Thickness for grouped ROIs Rohitkumar DATCHANAMOURTY
  • Re: [Freesurfer] Compute Cortical Thickness for grouped ROIs Douglas N. Greve
• [Freesurfer] Vertex Correspondences in Icosahedral Mesh Downsampling Samuel D Anderson
  • Re: [Freesurfer] Vertex Correspondences in Icosahedral Mesh Downsampling Douglas N. Greve
• Re: [Freesurfer] Regarding Freesurfer for Ubuntu 24.01 fsbuild
• Re: [Freesurfer] mri_TumorSynth: command not found fsbuild
• [Freesurfer] Fw: mri_TumorSynth: command not found Zapaishchykova, Anna
• [Freesurfer] FreeSurfer coordinates Yang Yifan
  • Re: [Freesurfer] FreeSurfer coordinates Huang, Yujing
  • Re: [Freesurfer] FreeSurfer coordinates Yang Yifan
  • Re: [Freesurfer] FreeSurfer coordinates Huang, Yujing
• [Freesurfer] New Postdoc Position in Neuroimaging, Machine Learning and Multi-Omics Joana Braga Pereira
• [Freesurfer] longitudinal analysis on one subject Isabella Rossellini
  • Re: [Freesurfer] longitudinal analysis on one subject Douglas N. Greve
• [Freesurfer] help with freeview - could not connect to display :0 This application failed to start because no Qt platform plugin could be initialized. Reinstalling the application may fix this problem. Paola Di Filippo
  • Re: [Freesurfer] help with freeview - could not connect to display :0 This application failed to start because no Qt platform plugin could be initialized. Reinstalling the application may fix this problem. fsbuild
• [Freesurfer] Error in loading wmparc2diff.mgz Ramesh Babu
  • Re: [Freesurfer] Error in loading wmparc2diff.mgz Huang, Yujing
  • Re: [Freesurfer] Error in loading wmparc2diff.mgz Huang, Yujing
  • Re: [Freesurfer] Error in loading wmparc2diff.mgz Ramesh Babu
  • Re: [Freesurfer] Error in loading wmparc2diff.mgz Ramesh Babu
  • Re: [Freesurfer] Error in loading wmparc2diff.mgz Douglas N. Greve
  • Re: [Freesurfer] Error in loading wmparc2diff.mgz Ramesh Babu
• [Freesurfer] Subcortical under segmentations Jeong Yeon Kang
  • Re: [Freesurfer] Subcortical under segmentations Douglas N. Greve
• [Freesurfer] Automated extraction of dural/meningeal ROI Sneha Pandya
  • Re: [Freesurfer] Automated extraction of dural/meningeal ROI Douglas N. Greve
• [Freesurfer] FSL Team Research Software Engineer position in Oxford William Clarke
• [Freesurfer] Corpus Callosum Missing in SAMSEG Output Taghizadeh Mortezaei, Nima
  • Re: [Freesurfer] Corpus Callosum Missing in SAMSEG Output Douglas N. Greve
• [Freesurfer] Patlak PET/MRI Andrade Rey René
  • Re: [Freesurfer] Patlak PET/MRI Douglas N. Greve
• Re: [Freesurfer] Issue with Right Hemisphere Segmentation/Parcellation Douglas N. Greve
  • Re: [Freesurfer] Issue with Right Hemisphere Segmentation/Parcellation Taghizadeh Mortezaei, Nima
  • Re: [Freesurfer] Issue with Right Hemisphere Segmentation/Parcellation Douglas N. Greve
• [Freesurfer] FreeSurfer 8.0.0 beta error, while calculating the local gyrification index Katharina Wittfeld
  • Re: [Freesurfer] FreeSurfer 8.0.0 beta error, while calculating the local gyrification index Douglas N. Greve
• [Freesurfer] Identical values for different cingulate regions Taghizadeh Mortezaei, Nima
  • Re: [Freesurfer] Identical values for different cingulate regions Douglas N. Greve
• [Freesurfer] no Qt platform plugin could be initialized Shakour Abuzneid
  • Re: [Freesurfer] no Qt platform plugin could be initialized fsbuild
• Re: [Freesurfer] [freesurfer] recon-all error Douglas N. Greve
• Re: [Freesurfer] Recon-all error... Douglas N. Greve
• Re: [Freesurfer] Freesurfer crashing (gui) or exting with error (command line) fsbuild
• [Freesurfer] Freesurfer crashing (gui) or exting with error (command line) Claas Philip Nähle
• [Freesurfer] Q: Tracula dmrirc file - set usethalnuc Kancsar Diana
• [Freesurfer] fixing/editing white matter surface Eszter Boros
  • Re: [Freesurfer] fixing/editing white matter surface Douglas N. Greve
  • Re: [Freesurfer] fixing/editing white matter surface Eszter Boros
  • Re: [Freesurfer] fixing/editing white matter surface Douglas N. Greve
• [Freesurfer] Freesurfer remotely processing Gonzalo Rojas Costa
  • Re: [Freesurfer] Freesurfer remotely processing Fischl, Bruce R.,PHD
  • Re: [Freesurfer] Freesurfer remotely processing fsbuild
• [Freesurfer] NextBrain: no segment_fast or segment_fireants.py AmirHussein Abdolalizadeh
  • Re: [Freesurfer] NextBrain: no segment_fast or segment_fireants.py Iglesias Gonzalez, Juan E.
  • Re: [Freesurfer] NextBrain: no segment_fast or segment_fireants.py fsbuild
• [Freesurfer] longitudinal analyses, more than 2 timepoints Eszter Boros
  • Re: [Freesurfer] longitudinal analyses, more than 2 timepoints Huang, Yujing
  • Re: [Freesurfer] longitudinal analyses, more than 2 timepoints Eszter Boros
  • Re: [Freesurfer] longitudinal analyses, more than 2 timepoints Eszter Boros
  • Re: [Freesurfer] longitudinal analyses, more than 2 timepoints Huang, Yujing
  • Re: [Freesurfer] longitudinal analyses, more than 2 timepoints Douglas N. Greve
• [Freesurfer] consensus on mp2rage or other t1w mri at 7T Jiaen Liu
  • [Freesurfer] NeuroQuant comparison? allio34...@aol.com
  • Re: [Freesurfer] NeuroQuant comparison? Fischl, Bruce R.,PHD
• [Freesurfer] aseg.mgz file not generated after recon-all Sara Rapuc
  • Re: [Freesurfer] aseg.mgz file not generated after recon-all Douglas N. Greve
• Re: [Freesurfer] Missing Choroid Plexus Segmentation in final output Iglesias Gonzalez, Juan E.
• [Freesurfer] Issue with mri_histo_atlas_segment_fireants Command Taghizadeh Mortezaei, Nima
  • Re: [Freesurfer] Issue with mri_histo_atlas_segment_fireants Command Huang, Yujing
  • Re: [Freesurfer] Issue with mri_histo_atlas_segment_fireants Command Iglesias Gonzalez, Juan E.
• [Freesurfer] freeview slow in vnc Jiaen Liu
  • Re: [Freesurfer] freeview slow in vnc fsbuild
  • Re: [Freesurfer] freeview slow in vnc Jiaen Liu
• [Freesurfer] Postdoc Position - 7 Tesla MRI of Prefrontal Cortex - University of California, Berkeley Allison Chen
• [Freesurfer] SegmentAAN tool Todd L Richards
  • Re: [Freesurfer] SegmentAAN tool fsbuild
  • [Freesurfer] SegmentAAN tool Todd L Richards
  • [Freesurfer] SegmentAAN tool Todd L Richards
  • Re: [Freesurfer] SegmentAAN tool fsbuild
• [Freesurfer] Any updates on thalamic nuclei mask in MNI space? Melissa Thalhammer
  • Re: [Freesurfer] Any updates on thalamic nuclei mask in MNI space? Douglas N. Greve
• [Freesurfer] New user allio34...@aol.com
  • Re: [Freesurfer] New user Douglas N. Greve
  • Re: [Freesurfer] New user allio34...@aol.com
  • Re: [Freesurfer] New user Fischl, Bruce R.,PHD
  • Re: [Freesurfer] New user allio34...@aol.com
• [Freesurfer] Compatibility with M4 processor? Kayla Bohlke
  • Re: [Freesurfer] Compatibility with M4 processor? fsbuild
  • Re: [Freesurfer] Compatibility with M4 processor? Kayla Bohlke
  • Re: [Freesurfer] Compatibility with M4 processor? fsbuild
• [Freesurfer] copy headers Aaron Tanenbaum
  • Re: [Freesurfer] copy headers Douglas N. Greve
• Re: [Freesurfer] Error in recon-all Douglas N. Greve
  • Re: [Freesurfer] Error in recon-all Douglas N. Greve
  • Re: [Freesurfer] [WARNING: ATTACHMENT UNSCANNED]Re: Error in recon-all Douglas N. Greve
• [Freesurfer] Neuroimaging Analyst Position at University of Seville PATRICIA POMBO SEGURA
• Re: [Freesurfer] Freesurfer Digest, Vol 251, Issue 6 黄月虹
• [Freesurfer] registration error Ramesh Babu
  • Re: [Freesurfer] registration error Douglas N. Greve
  • Re: [Freesurfer] registration error Ramesh Babu
• [Freesurfer] How to Plot Surface with ROI Boundaries Using Harvard-Oxford Brain Atlas? Zeng, Xinglin
  • Re: [Freesurfer] How to Plot Surface with ROI Boundaries Using Harvard-Oxford Brain Atlas? Douglas N. Greve
  • [Freesurfer] 回复: How to Plot Surface with ROI Boundaries Using Harvard-Oxford Brain Atlas? Zeng, Xinglin
• Re: [Freesurfer] [ext] Re: Freeview crash fsbuild
• [Freesurfer] LME pipeline for individual ROIs Bondi, Daniel
  • Re: [Freesurfer] Fwd: LME pipeline for individual ROIs Diers, Kersten /DZNE
  • Re: [Freesurfer] Fwd: LME pipeline for individual ROIs Bondi, Daniel
• [Freesurfer] preparing config file for Tracula Barletta, Valeria
• [Freesurfer] Freeview crash Tietze, Anna
  • Re: [Freesurfer] Freeview crash Wang, Ruopeng
  • Re: [Freesurfer] [ext] Re: Freeview crash Tietze, Anna
  • Re: [Freesurfer] [ext] Re: Freeview crash Wang, Ruopeng
  • Re: [Freesurfer] [ext] Re: Freeview crash Tietze, Anna
  • [Freesurfer] WG: [ext] Re: Freeview crash Tietze, Anna
  • Re: [Freesurfer] [ext] Re: Freeview crash Wang, Ruopeng
  • Re: [Freesurfer] [ext] Re: Freeview crash Tietze, Anna
  • Re: [Freesurfer] [ext] Re: Freeview crash Wang, Ruopeng
  • Re: [Freesurfer] [ext] Re: Freeview crash Dicamillo, Robert
  • Re: [Freesurfer] Freeview crash fsbuild
  • Re: [Freesurfer] [ext] Re: Freeview crash Tietze, Anna
• Re: [Freesurfer] Recon-all Error: "ln: failed to create symbolic link 'lh.white.H': Operation not permitted" fsbuild
• Re: [Freesurfer] Freesurfer Digest, Vol 250, Issue 15 黄月虹
• Re: [Freesurfer] FreeSurfer 8.0.0-beta: Stack smashing and normalization failures with 7T MP2RAGE data fsbuild
  • Re: [Freesurfer] FreeSurfer 8.0.0-beta: Stack smashing and normalization failures with 7T MP2RAGE data Michael Eyre
  • Re: [Freesurfer] FreeSurfer 8.0.0-beta: Stack smashing and normalization failures with 7T MP2RAGE data Douglas N. Greve
  • Re: [Freesurfer] FreeSurfer 8.0.0-beta: Stack smashing and normalization failures with 7T MP2RAGE data Douglas N. Greve
• [Freesurfer] Reliability of Optic Chiasm Volume Measurements in FreeSurfer Knut J Bjuland
  • Re: [Freesurfer] Reliability of Optic Chiasm Volume Measurements in FreeSurfer Douglas N. Greve
• [Freesurfer] freesurfer installation issues on debian Misty
  • Re: [Freesurfer] freesurfer installation issues on debian fsbuild
• [Freesurfer] Doing predictive models on freesurfer outputs Yunus Soleymani
• [Freesurfer] preparing config file to run Tracula Barletta, Valeria
• [Freesurfer] How Can I Track Coordinates from NIfTI Raw Files 권용현
  • Re: [Freesurfer] How Can I Track Coordinates from NIfTI Raw Files Douglas N. Greve
• [Freesurfer] Feature associations between recon-all and synthseg Banerjee, Tania
  • Re: [Freesurfer] Feature associations between recon-all and synthseg Fischl, Bruce R.,PHD
• [Freesurfer] Fw: Welcome to the "Freesurfer" mailing list (Digest mode) 黄月虹
• [Freesurfer] mri_convert: Command not found Katherine Sawyer
• [Freesurfer] Extracting just the eTIV from stats file. Zeng, Victor (BIDMC - Keshavan - Psychiatry)
  • Re: [Freesurfer] Extracting just the eTIV from stats file. Douglas N. Greve
• [Freesurfer] obtain vertex neighborhood Jiaen Liu
  • Re: [Freesurfer] obtain vertex neighborhood Douglas N. Greve
  • Re: [Freesurfer] obtain vertex neighborhood Jiaen Liu
• [Freesurfer] amygdala nuclei from segmentHA_T1 registration issue Stephanie Williams
• [Freesurfer] Issues with hippocampal segmentation code (segmentHA_T2) and missing ConcatenateSubregionsResults in 7.3.1 Chumin, Evgeny Jenya
• [Freesurfer] Single voxel grey-white matter boundary binary mask Tamir Eisenstein
  • Re: [Freesurfer] Single voxel grey-white matter boundary binary mask Douglas N. Greve
  • Re: [Freesurfer] Single voxel grey-white matter boundary binary mask Fischl, Bruce R.,PHD
• [Freesurfer] FreeSurfer Labels Question Barsotti, Ercole
  • Re: [Freesurfer] FreeSurfer Labels Question Fischl, Bruce R.,PHD
  • Re: [Freesurfer] [External] Re: FreeSurfer Labels Question Barsotti, Ercole
• [Freesurfer] Importing surface meshes from 3rd party cortical surface reconstruction tools for analysis in fsaverage template space James Hengenius
  • Re: [Freesurfer] Importing surface meshes from 3rd party cortical surface reconstruction tools for analysis in fsaverage template space Zollei, Lilla,Ph.D.
  • Re: [Freesurfer] Importing surface meshes from 3rd party cortical surface reconstruction tools for analysis in fsaverage template space James Hengenius
• [Freesurfer] synthmorph for functional registration? Josh
  • Re: [Freesurfer] synthmorph for functional registration? Hoffmann, Malte,PhD
  • Re: [Freesurfer] synthmorph for functional registration? Fischl, Bruce R.,PHD
• [Freesurfer] Spiky Brains Bos, M.G.N. (Marieke)
  • Re: [Freesurfer] Spiky Brains Douglas N. Greve
  • Re: [Freesurfer] Spiky Brains Bos, M.G.N. (Marieke)
• [Freesurfer] needed: tools to work with synthmorph deformations in ANTS and FSL pipelines. Josh

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