External Email - Use Caution i am working with pet images and after running recon-all i used the transformation .lta to move the pet image in the standard space (pet and mri are already in the same space). By looking at the segmentation template aparc+aseg i noticed there is a loot of gray matter not included in the segmentation.
Il giorno gio 27 mar 2025 alle ore 16:56 Douglas N. Greve < dgr...@mgh.harvard.edu> ha scritto: > I'm not sure what you mean. by itself mni152 is not a segmentation > template. Or do you want to do the analysis in mni152 space? If so, why? > > On 3/27/2025 10:17 AM, Davide Sabbadin wrote: > > External Email - Use Caution > Hi all, > Is there the possibility to perform the segmentation through recon-all > using a different template, e.g. mni152? > > Thanks, > Sabbadin Davide > > _______________________________________________ > Freesurfer mailing > listfreesur...@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://secure-web.cisco.com/18pMmie_Y_bVsVkbmh-vcGXORU40bYoSrWhXDyG9qMxDnK-oAhneY-IpPRXzvUOyECtHFhhLBboV3-m6iaRvGugNe1avduSKEALruTspIigj04XUFR7nQbTCRyMoo1nGyMZoxAgDP-b1xCv8MbLPvEJYCF-HbKvbkMTOaz6KqeFekFhFTCQ6TPnJdA_slIGsrB4iD68iPfORsC0QNEspvNSX91i_OP88gm2hCSH4uBjRHj9YkhfsuY0EFu7pSUllURIjkDKV9YnQI8Lao6XR3H1L7tmSfjX-PB4rM_Upj9rp_DexUuLD50RDQfOJZ6TPWDKjTZOVRA9tmfS3GcH-DCw/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer > The information in this e-mail is intended only for the person to whom it > is addressed. If you believe this e-mail was sent to you in error and the > e-mail contains patient information, please contact the Mass General > Brigham Compliance HelpLine at > https://secure-web.cisco.com/162MmtGlWh6lxmFEWWkNOJCCtZoxRnw0EexFxFyms576ksXvdhNMPvjttjRknl_LYhFRvI-LhHed-REEmY1L0naVtWLXGvzzsxk5XyC9D8J60MjFs67QUDApAaSPGpFEsThBhd-BmahnvDu1XY9cNu-PV9WBq-poyV25UhyhZKKvaQOWVruJ6Caa93ZBZdKWzGGn_8n-VjTNuvLnlcX7bQut_nDehy9pC3-IwMdtxq3Rs2C0smpUbzNx8-ZeMTjZ4WxRTQmkxKhWuSaoNHoiCXBLeIdnaTqBeuuV7vR6eP8VLr4M0nNyF2nDWarpWEUTeePmLMhvFlhaWTjb1lU2daA/https%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline > < > https://secure-web.cisco.com/162MmtGlWh6lxmFEWWkNOJCCtZoxRnw0EexFxFyms576ksXvdhNMPvjttjRknl_LYhFRvI-LhHed-REEmY1L0naVtWLXGvzzsxk5XyC9D8J60MjFs67QUDApAaSPGpFEsThBhd-BmahnvDu1XY9cNu-PV9WBq-poyV25UhyhZKKvaQOWVruJ6Caa93ZBZdKWzGGn_8n-VjTNuvLnlcX7bQut_nDehy9pC3-IwMdtxq3Rs2C0smpUbzNx8-ZeMTjZ4WxRTQmkxKhWuSaoNHoiCXBLeIdnaTqBeuuV7vR6eP8VLr4M0nNyF2nDWarpWEUTeePmLMhvFlhaWTjb1lU2daA/https%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline> > . > Please note that this e-mail is not secure (encrypted). If you do not > wish to continue communication over unencrypted e-mail, please notify the > sender of this message immediately. Continuing to send or respond to > e-mail after receiving this message means you understand and accept this > risk and wish to continue to communicate over unencrypted e-mail. >
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