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• • Re: [PyMOL] Which 3D setup for a new installation? (Since 3D Vision is discontinued) Thomas Holder
• [PyMOL] Question about python commands in PyMOL Hrutvik Bhavsar
  • Re: [PyMOL] [EXTERNAL] Question about python commands in PyMOL Mooers, Blaine H.M. (HSC)
  • Re: [PyMOL] Question about python commands in PyMOL Ali Kusay
• [PyMOL] translate command after reorienting molecule Daniel Burns
• [PyMOL] Question: How can I analyze the binding strength/energy between a small molecule and DNA using Pymol? Alexander Richardson
• [PyMOL] Python script with iterate_state and selection command ABEL Stephane
  • Re: [PyMOL] Python script with iterate_state and selection command Pedro Lacerda
  • Re: [PyMOL] Python script with iterate_state and selection command ABEL Stephane
  • Re: [PyMOL] Python script with iterate_state and selection command Thomas Holder
  • Re: [PyMOL] Python script with iterate_state and selection command ABEL Stephane
• Re: [PyMOL] [EXTERNAL] Valence_Mode issue Mooers, Blaine H.M. (HSC)
  • Re: [PyMOL] [EXTERNAL] Valence_Mode issue Dr. Vijay Masand
• [PyMOL] transparent electron density silhouette Daniel P Farrell
  • Re: [PyMOL] transparent electron density silhouette Thomas Holder
  • Re: [PyMOL] transparent electron density silhouette Ali Kusay
• [PyMOL] Color by index Vertika Gautam
  • [PyMOL] color by index Chen, Qiang
• [PyMOL] Write the number of molecules for each state in a file ABEL Stephane
• [PyMOL] Install license file from CLI Antonio Serrano
  • Re: [PyMOL] Install license file from CLI Thomas Holder
  • Re: [PyMOL] Install license file from CLI Antonio Serrano
  • Re: [PyMOL] Install license file from CLI Thomas Holder
  • Re: [PyMOL] Install license file from CLI Antonio Serrano
  • Re: [PyMOL] Install license file from CLI Thomas Holder
  • Re: [PyMOL] Install license file from CLI Antonio Serrano
  • Re: [PyMOL] Install license file from CLI Thomas Holder
  • Re: [PyMOL] Install license file from CLI Antonio Serrano
• [PyMOL] Effect of different align method sunyeping via PyMOL-users
  • Re: [PyMOL] Effect of different align method sunyeping via PyMOL-users
  • Re: [PyMOL] Effect of different align method Robert Campbell
• [PyMOL] Antwort: PyMOL-users Digest, Vol 169, Issue 20 honegger
• [PyMOL] hydrogen bond list for a series of files Chen, Qiang
  • Re: [PyMOL] hydrogen bond list for a series of files Mooers, Blaine H.M. (HSC)
  • Re: [PyMOL] hydrogen bond list for a series of files Chen, Qiang
  • Re: [PyMOL] hydrogen bond list for a series of files Mooers, Blaine H.M. (HSC)
  • Re: [PyMOL] hydrogen bond list for a series of files Chen, Qiang
  • Re: [PyMOL] hydrogen bond list for a series of files Mooers, Blaine H.M. (HSC)
  • Re: [PyMOL] hydrogen bond list for a series of files Chen, Qiang
  • [PyMOL] hydrogen bond list for a series of files Chen, Qiang
  • Re: [PyMOL] hydrogen bond list for a series of files Mooers, Blaine H.M. (HSC)
  • Re: [PyMOL] hydrogen bond list for a series of files Robert Campbell
• Re: [PyMOL] renumber (Oganesyan, Vaheh) Chen, Qiang
• [PyMOL] renumber Oganesyan, Vaheh
  • Re: [PyMOL] renumber Jarrett Johnson
  • Re: [PyMOL] renumber Oganesyan, Vaheh
  • Re: [PyMOL] renumber Mooers, Blaine H.M. (HSC)
  • Re: [PyMOL] renumber Oganesyan, Vaheh
  • Re: [PyMOL] renumber Mooers, Blaine H.M. (HSC)
  • Re: [PyMOL] renumber Jared Sampson
  • Re: [PyMOL] renumber Oganesyan, Vaheh
  • Re: [PyMOL] renumber Mooers, Blaine H.M. (HSC)
  • Re: [PyMOL] renumber Jared Sampson
  • Re: [PyMOL] renumber Oganesyan, Vaheh
  • Re: [PyMOL] Renumber honegger
  • Re: [PyMOL] Renumber Oganesyan, Vaheh
• [PyMOL] APBS plugin for Sugars Mario Garcia Urena
  • Re: [PyMOL] APBS plugin for Sugars Thomas Holder
  • Re: [PyMOL] APBS plugin for Sugars Mario Garcia Urena
• Re: [PyMOL] PyMOL-users Digest, Vol 169, Issue 9 Len Banaszak via PyMOL-users
• [PyMOL] ramachandran plots Thomas Charles Pochapsky
  • Re: [PyMOL] ramachandran plots Pedro Lacerda
• [PyMOL] User data Pedro Lacerda
  • Re: [PyMOL] User data Thomas Holder
  • Re: [PyMOL] User data Pedro Lacerda
• [PyMOL] View two proteins from one pdb file Neena Susan Eappen
  • Re: [PyMOL] View two proteins from one pdb file Joel Tyndall
  • Re: [PyMOL] View two proteins from one pdb file Neena Susan Eappen
• [PyMOL] Python 2 support removed from master branch Thomas Holder
• [PyMOL] protecting a group during subsequent aligment Yong Tang
  • Re: [PyMOL] [EXTERNAL] protecting a group during subsequent aligment Mooers, Blaine H.M. (HSC)
  • Re: [PyMOL] [EXTERNAL] protecting a group during subsequent aligment Thomas Holder
  • Re: [PyMOL] [EXTERNAL] protecting a group during subsequent aligment Yong Tang
• [PyMOL] Changing Chain ID patricia
  • Re: [PyMOL] [EXTERNAL] Changing Chain ID Mooers, Blaine H.M. (HSC)
  • Re: [PyMOL] [EXTERNAL] Changing Chain ID patricia
  • Re: [PyMOL] [EXTERNAL] Changing Chain ID Mooers, Blaine H.M. (HSC)
• [PyMOL] Numpy for Pymod Juliet Lee
  • Re: [PyMOL] [EXTERNAL] Numpy for Pymod Mooers, Blaine H.M. (HSC)
• [PyMOL] Molecular Docking Grace Ciabattoni
• [PyMOL] Automatic Video generation Mohamed Abdelaal
• [PyMOL] volume representation is extremely dark colored Stanevich, Vitali [JRDUS] via PyMOL-users
  • Re: [PyMOL] volume representation is extremely dark colored Mooers, Blaine H.M. (HSC)
  • Re: [PyMOL] volume representation is extremely dark colored Stanevich, Vitali [JRDUS] via PyMOL-users
  • Re: [PyMOL] volume representation is extremely dark colored Thomas Holder
  • Re: [PyMOL] volume representation is extremely dark colored Stanevich, Vitali [JRDUS] via PyMOL-users
  • Re: [PyMOL] volume representation is extremely dark colored Akbar Shaikh
• [PyMOL] Importing Non-Protein Structure Files Grace Ciabattoni
• [PyMOL] DSSR-enabled innovative schematics of 3D nucleic acid structures with PyMOL Xiang-Jun Lu
  • Re: [PyMOL] DSSR-enabled innovative schematics of 3D nucleic acid structures with PyMOL Xiang-Jun Lu
• [PyMOL] Structure allignmnet in Pymol mtarazkar
  • Re: [PyMOL] Structure allignmnet in Pymol Joel Tyndall
• [PyMOL] Updating to 2.4 Grace Ciabattoni
• [PyMOL] tertiary structure/protein folding Grace Ciabattoni
  • Re: [PyMOL] tertiary structure/protein folding Tamas Hegedus
  • Re: [PyMOL] tertiary structure/protein folding KurtYilmaz, Nese
• [PyMOL] Consistent coloring between sticks of sidechains and cartoon backbones in spectrum coloring Chen, Qiang
  • Re: [PyMOL] Consistent coloring between sticks of sidechains and cartoon backbones in spectrum coloring Mooers, Blaine H.M. (HSC)
  • Re: [PyMOL] Consistent coloring between sticks of sidechains and cartoon backbones in spectrum coloring Chen, Qiang
  • Re: [PyMOL] Consistent coloring between sticks of sidechains and cartoon backbones in spectrum coloring Chen, Qiang
• Re: [PyMOL] [EXTERNAL] How to compute the interface surface between ligand and protein? Mooers, Blaine H.M. (HSC)
  • Re: [PyMOL] [EXTERNAL] How to compute the interface surface between ligand and protein? Thomas Holder
  • Re: [PyMOL] [EXTERNAL] How to compute the interface surface between ligand and protein? Thomas Evangelidis
  • Re: [PyMOL] [EXTERNAL] How to compute the interface surface between ligand and protein? Thomas Holder
• [PyMOL] PyMOL 2.4 released Thomas Holder
• [PyMOL] How to inspect contents of 's' and 'p' for an atom? Mungo Carstairs (Staff)
  • Re: [PyMOL] How to inspect contents of 's' and 'p' for an atom? Mooers, Blaine H.M. (HSC)
  • Re: [PyMOL] How to inspect contents of 's' and 'p' for an atom? Mungo Carstairs (Staff)
  • Re: [PyMOL] How to inspect contents of 's' and 'p' for an atom? Thomas Holder
• [PyMOL] XML-RPC 'label' command format Mungo Carstairs (Staff)
• [PyMOL] Scenes Waybright, Timothy (NIH/NCI) [C] via PyMOL-users
  • Re: [PyMOL] Scenes Jared Sampson
• [PyMOL] Outlines thickness Gianluca Tomasello
  • Re: [PyMOL] Outlines thickness h. adam steinberg
  • Re: [PyMOL] Outlines thickness Gianluca Tomasello
• [PyMOL] Coloring different carbons differently Полина Короткова
  • Re: [PyMOL] Coloring different carbons differently Chris Fage
  • Re: [PyMOL] Coloring different carbons differently Chris Fage
• [PyMOL] Capturing scene pixels without writing image to disk Antonio Serrano
  • Re: [PyMOL] Capturing scene pixels without writing image to disk Thomas Holder
  • Re: [PyMOL] Capturing scene pixels without writing image to disk Antonio Serrano
  • Re: [PyMOL] Capturing scene pixels without writing image to disk Thomas Holder
• [PyMOL] resn variable in label command C.J.
  • Re: [PyMOL] [EXTERNAL] resn variable in label command Mooers, Blaine H.M. (HSC)
  • Re: [PyMOL] [EXTERNAL] resn variable in label command C.J.
• [PyMOL] moving an object and keep others C.J.
  • Re: [PyMOL] moving an object and keep others 杨海滨
  • Re: [PyMOL] moving an object and keep others C.J.
• [PyMOL] Two disparate H-bond methods (docked ligand & receptor) leifepeterson
• [PyMOL] Wait for processing to complete before invoking new commands leifepeterson
  • Re: [PyMOL] Wait for processing to complete before invoking new commands Tamas Hegedus
  • Re: [PyMOL] Wait for processing to complete before invoking new commands leifepeterson
• [PyMOL] For set.view(), there's a Wiki example for the GUI, but not the PyMol API leifepeterson
  • Re: [PyMOL] For set.view(), there's a Wiki example for the GUI, but not the PyMol API Thomas Holder
• [PyMOL] Number of parameters is off for cmd.set_view? leifepeterson
  • Re: [PyMOL] Number of parameters is off for cmd.set_view? Tamas Hegedus
  • Re: [PyMOL] [EXTERNAL] Number of parameters is off for cmd.set_view? Mooers, Blaine H.M. (HSC)
• [PyMOL] vector coordinates within same structure Kayce Tomcho
• [PyMOL] Script for drawing docked ligand-active site pics leifepeterson
  • Re: [PyMOL] Script for drawing docked ligand-active site pics Tamas Hegedus
  • Re: [PyMOL] Script for drawing docked ligand-active site pics Thomas Evangelidis
• [PyMOL] Extract all phi and psi angles Neena Susan Eappen
  • Re: [PyMOL] Extract all phi and psi angles Jarrett Johnson
  • Re: [PyMOL] Extract all phi and psi angles Neena Susan Eappen
  • Re: [PyMOL] Extract all phi and psi angles Tamas Hegedus
  • Re: [PyMOL] Extract all phi and psi angles Neena Susan Eappen
  • Re: [PyMOL] Extract all phi and psi angles Robert Campbell
• [PyMOL] Grid mode problem George Tzotzos via PyMOL-users
  • Re: [PyMOL] Grid mode problem Tamas Hegedus
  • Re: [PyMOL] Grid mode problem George Tzotzos via PyMOL-users
  • Re: [PyMOL] Grid mode problem Tamas Hegedus
• [PyMOL] How to get all side-chain torsion angles of a protein structure Cavi via PyMOL-users
• [PyMOL] incomplete secondary structure h. adam steinberg
  • [PyMOL] incomplete secondary structure honegger
  • Re: [PyMOL] incomplete secondary structure h. adam steinberg
  • Re: [PyMOL] incomplete secondary structure Thomas Holder
• [PyMOL] Apply valence settings to an object Chris Fage
  • Re: [PyMOL] [EXTERNAL] Apply valence settings to an object Mooers, Blaine H.M. (HSC)
  • Re: [PyMOL] [EXTERNAL] Apply valence settings to an object Chris Fage
• [PyMOL] entering user input in Pymol script and defining sets in Python Luis Garcia Alles
• [PyMOL] Holes in dots Jason Mosier
  • Re: [PyMOL] Holes in dots Jared Sampson
• [PyMOL] Compare two structures with the same connectivity but different stereochemistry? Peng Yu
  • Re: [PyMOL] Compare two structures with the same connectivity butdifferent stereochemistry? Peng Yu
  • Re: [PyMOL] Compare two structures with the same connectivity butdifferent stereochemistry? Jared Sampson
• [PyMOL] API for connect_mode Marcelo Depólo
  • Re: [PyMOL] API for connect_mode Jake Verburgt
• Re: [PyMOL] [EXTERNAL] broken DNA cartoon Mooers, Blaine H.M. (HSC)
  • Re: [PyMOL] [EXTERNAL] broken DNA cartoon h. adam steinberg
• Re: [PyMOL] broken DNA cartoon Jared Sampson
  • Re: [PyMOL] broken DNA cartoon h. adam steinberg
  • Re: [PyMOL] [EXTERNAL] Re: broken DNA cartoon Mooers, Blaine H.M. (HSC)
  • Re: [PyMOL] [EXTERNAL] Re: broken DNA cartoon h. adam steinberg
• [PyMOL] Selection of elements in object Henrik Gotfredsen
  • Re: [PyMOL] Selection of elements in object Marko Hyvonen
• [PyMOL] Accessibility Conformance Report William Marcotte Jr
• [PyMOL] How to load ~/.pymolpluginsrc.py before finish_launching()? Pedro Lacerda
• [PyMOL] Pymol Rendering Seán Downey
  • Re: [PyMOL] Pymol Rendering Thomas Holder
• [PyMOL] How to hide dihedral angle labels in mdo animation using set_dihedral Nanna Holmgaard List
  • Re: [PyMOL] How to hide dihedral angle labels in mdo animation using set_dihedral Thomas Holder
  • Re: [PyMOL] How to hide dihedral angle labels in mdo animation using set_dihedral Nanna Holmgaard List
• [PyMOL] Accessing vertex normals from surface representation within PyMOL session Jared Sampson
  • Re: [PyMOL] Accessing vertex normals from surface representation within PyMOL session Thomas Holder
• [PyMOL] cmd.add_state_loop() function Zheng Ruan
• [PyMOL] Can't install latest version on Mac Ioannis Riziotis
  • Re: [PyMOL] Can't install latest version on Mac Jarrett Johnson
• [PyMOL] Assign different color to dash lines Mirna Damergi
  • Re: [PyMOL] Assign different color to dash lines Ali Kusay
• [PyMOL] PyMOL crashes when building a nanotube Vyshnavi Karra
  • [PyMOL] Open source v2.3.3 Ioannis Riziotis
  • Re: [PyMOL] Open source v2.3.3 Jarrett Johnson
• [PyMOL] How to compile pymol with --glut? 孙业平 via PyMOL-users
  • Re: [PyMOL] How to compile pymol with --glut? Thomas Holder
  • Re: [PyMOL] How to compile pymol with --glut? sunyeping via PyMOL-users
  • [PyMOL] Fw: How to compile pymol with --glut? sunyeping via PyMOL-users
• [PyMOL] floating external gui Tamas Hegedus
  • Re: [PyMOL] floating external gui Thomas Holder
• [PyMOL] Getting session file name Junsu Park aka. Jason Mosier
  • Re: [PyMOL] Getting session file name Thomas Holder

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