Hi,
For this type of analysis I would use MDAnalysis (Python):
https://www.mdanalysis.org/
https://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/dihedrals.html
Tamas
On 5/9/20 5:08 PM, Neena Susan Eappen wrote:
Hi Jarrett,
Thank you for your reply. However, that command gives phi and psi
angles for only one atom (when only one atom is selected). Is there
one command we can use to extract all phi and psi angles?
Thanks,
Neena
On Mon, 27 Apr 2020 at 22:01, Jarrett Johnson
<jarrett.john...@schrodinger.com
<mailto:jarrett.john...@schrodinger.com>> wrote:
Hi Neena,
Is this command sufficient?
https://pymol.org/dokuwiki/doku.php?id=command:phi_psi
Best,
Jarrett J
On Mon, Apr 27, 2020 at 9:45 PM Neena Susan Eappen
<neenasusan...@gmail.com <mailto:neenasusan...@gmail.com>> wrote:
Hello PyMOL users,
How to extract all peptide dihedral angles (phi and psi) in PyMOL?
Many thanks,
Neena
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