Thank you Jarrett, Then the command
alter vh, resi=str(int(resi)+0) should work, right? But it doesn’t because there are residue numbers with letters. Is there a command that will either remove the letters or won’t pay attention to them and renumber sequentially. Regards, From: Jarrett Johnson <jarrett.john...@schrodinger.com> Sent: Monday, June 15, 2020 11:38 AM To: Oganesyan, Vaheh <vaheh.oganes...@astrazeneca.com> Cc: pymol-users@lists.sourceforge.net Subject: Re: [PyMOL] renumber Hello, The command shown on this page https://pymolwiki.org/index.php/Renumber<https://pymolwiki.org/index.php/Renumber> is not one that comes with PyMOL by default. Try downloading the script and importing it via the `run` command in the PyMOL command-line: run renumber.py and then you should be able to use the command as shown on the Wiki page. Hope that helps, Jarrett J. On Mon, Jun 15, 2020 at 11:29 AM Oganesyan, Vaheh <vaheh.oganes...@astrazeneca.com<mailto:vaheh.oganes...@astrazeneca.com>> wrote: Hello PyMOLers, Wiki uses renumber command to alter residue numbers, but PyMOL doesn’t recognize it. Is it that Wiki is old, or my PyMOL version is dusty? Regards, Vaheh _______________________________________________ PyMOL-users mailing list Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net<http://www.mail-archive.com/pymol-users@lists.sourceforge.net> Unsubscribe: https://sourceforge.net/projects/pymol/lists/pymol-users/unsubscribe<https://sourceforge.net/projects/pymol/lists/pymol-users/unsubscribe> -- Jarrett Johnson | Senior Developer [Schrodinger Logo]<https://www.schrodinger.com/>
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