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• • [gmx-users] Re: fluctuation of energy in rerun Brad Van Oosten
• [gmx-users] psf2top: a tool for converting NAMD PSF files to GROMACS topologies Reza
• [gmx-users] Error bar for free energy afsaneh maleki
• [gmx-users] gromacs 4.6.3 and Intel compiiler 11.x Guanglei Cui
  • Re: [gmx-users] gromacs 4.6.3 and Intel compiiler 11.x Justin Lemkul
  • Re: [gmx-users] gromacs 4.6.3 and Intel compiiler 11.x Guanglei Cui
  • Re: [gmx-users] gromacs 4.6.3 and Intel compiiler 11.x Mark Abraham
  • Re: [gmx-users] gromacs 4.6.3 and Intel compiiler 11.x Guanglei Cui
  • Re: [gmx-users] gromacs 4.6.3 and Intel compiiler 11.x Mark Abraham
  • Re: [gmx-users] gromacs 4.6.3 and Intel compiiler 11.x Szilárd Páll
  • Re: [gmx-users] gromacs 4.6.3 and Intel compiiler 11.x Guanglei Cui
  • Re: [gmx-users] gromacs 4.6.3 and Intel compiiler 11.x Mark Abraham
  • Re: [gmx-users] gromacs 4.6.3 and Intel compiiler 11.x Guanglei Cui
• [gmx-users] Re: Select atoms in a residue ABEL Stephane 175950
  • Re: [gmx-users] Re: Select atoms in a residue Justin Lemkul
• [gmx-users] Steered MD in gromacs hanna pdb
  • Re: [gmx-users] Steered MD in gromacs Justin Lemkul
  • Re: [gmx-users] Steered MD in gromacs Gianluca Interlandi
  • Re: [gmx-users] Steered MD in gromacs Justin Lemkul
  • Re: [gmx-users] Steered MD in gromacs Gianluca Interlandi
• [gmx-users] Select atoms in a residue ABEL Stephane 175950
  • Re: [gmx-users] Select atoms in a residue Justin Lemkul
• [gmx-users] Position Restrained of ions Steven Neumann
  • Re: [gmx-users] Position Restrained of ions Justin Lemkul
• [gmx-users] Several questions about the GPU version grita
  • Re: [gmx-users] Several questions about the GPU version Mark Abraham
• [gmx-users] Re: MD vs. free energy simulations Jernej Zidar
  • Re: [gmx-users] Re: MD vs. free energy simulations Justin Lemkul
  • [gmx-users] Re: MD vs. free energy simulations Jernej Zidar
  • [gmx-users] Re: MD vs. free energy simulations Jernej Zidar
  • Re: [gmx-users] Re: MD vs. free energy simulations Mark Abraham
  • Re: [gmx-users] Re: MD vs. free energy simulations Justin Lemkul
• [gmx-users] adding ETHANOL to CGennFF in gromacs has problem Golshan Hejazi
  • Re: [gmx-users] adding ETHANOL to CGennFF in gromacs has problem Justin Lemkul
  • Re: [gmx-users] adding ETHANOL to CGennFF in gromacs has problem Justin Lemkul
  • Re: [gmx-users] adding ETHANOL to CGennFF in gromacs has problem Golshan Hejazi
  • Re: [gmx-users] adding ETHANOL to CGennFF in gromacs has problem Justin Lemkul
• [gmx-users] Ligand charge issues Muhammad Ayaz Anwar
  • Re: [gmx-users] Ligand charge issues Alan
• [gmx-users] question about g_hbond Nidhi Katyal
  • Re: [gmx-users] question about g_hbond Justin Lemkul
  • Re: [gmx-users] question about g_hbond Nidhi Katyal
  • Re: [gmx-users] question about g_hbond Justin Lemkul
  • Re: [gmx-users] question about g_hbond Nidhi Katyal
  • Re: [gmx-users] question about g_hbond Justin Lemkul
  • Re: [gmx-users] question about g_hbond Nidhi Katyal
  • Re: [gmx-users] question about g_hbond Justin Lemkul
• [gmx-users] is there any tool for flexibility? Albert
  • Re: [gmx-users] is there any tool for flexibility? Justin Lemkul
  • Re: [gmx-users] is there any tool for flexibility? Albert
  • Re: [gmx-users] is there any tool for flexibility? Justin Lemkul
  • Re: [gmx-users] is there any tool for flexibility? Thomas Evangelidis
  • Re: [gmx-users] is there any tool for flexibility? João M . Damas
• [gmx-users] quesion mjm136525
  • Re: [gmx-users] quesion Justin Lemkul
• [gmx-users] Umbrella Sampling PMF Shima Arasteh
  • Re: [gmx-users] Umbrella Sampling PMF Justin Lemkul
• [gmx-users] question about g_hydorder Nidhi Katyal
  • [gmx-users] question about g_hydorder Nidhi Katyal
• [gmx-users] grompy and how to call energy routine Gianluca Interlandi
  • Re: [gmx-users] grompy and how to call energy routine Gianluca Interlandi
  • Re: [gmx-users] grompy and how to call energy routine Justin Lemkul
  • Re: [gmx-users] grompy and how to call energy routine Gianluca Interlandi
  • Re: [gmx-users] grompy and how to call energy routine Justin Lemkul
  • Re: [gmx-users] grompy and how to call energy routine Gianluca Interlandi
  • Re: [gmx-users] grompy and how to call energy routine Justin Lemkul
  • Re: [gmx-users] grompy and how to call energy routine Justin Lemkul
  • Re: [gmx-users] grompy and how to call energy routine Gianluca Interlandi
  • Re: [gmx-users] grompy and how to call energy routine Mark Abraham
  • Re: [gmx-users] grompy and how to call energy routine Gianluca Interlandi
• [gmx-users] Reg mpirun error vidhya sankar
  • Re: [gmx-users] Reg mpirun error Mark Abraham
• [gmx-users] Reg Mpi run Error vidhya sankar
  • Re: [gmx-users] Reg Mpi run Error Justin Lemkul
• [gmx-users] TPIC and GMX_TPI_DUMP Rafael I. Silverman y de la Vega
  • Re: [gmx-users] TPIC and GMX_TPI_DUMP João M . Damas
  • Re: [gmx-users] TPIC and GMX_TPI_DUMP Rafael I. Silverman y de la Vega
  • Re: [gmx-users] TPIC and GMX_TPI_DUMP João M . Damas
  • Re: [gmx-users] TPIC and GMX_TPI_DUMP Rafael I. Silverman y de la Vega
  • Re: [gmx-users] TPIC and GMX_TPI_DUMP João M . Damas
  • Re: [gmx-users] TPIC and GMX_TPI_DUMP João M . Damas
  • Re: [gmx-users] TPIC and GMX_TPI_DUMP Rafael I. Silverman y de la Vega
  • Re: [gmx-users] TPIC and GMX_TPI_DUMP Rafael I. Silverman y de la Vega
• [gmx-users] AVX libraries with GMX4.6.3 Ali Sinan Saglam
  • Re: [gmx-users] AVX libraries with GMX4.6.3 Mark Abraham
  • Re: [gmx-users] AVX libraries with GMX4.6.3 Ali Sinan Saglam
  • Re: [gmx-users] AVX libraries with GMX4.6.3 Mark Abraham
  • Re: [gmx-users] AVX libraries with GMX4.6.3 Ali Sinan Saglam
  • Re: [gmx-users] AVX libraries with GMX4.6.3 Mark Abraham
• [gmx-users] Distribution of an atom along a trajectory Shima Arasteh
  • Re: [gmx-users] Distribution of an atom along a trajectory Justin Lemkul
• RE: [gmx-users] Creating an infinite sheet of grapheme #TAN BENG HAU IAN#
• [gmx-users] Distance restraints exploding system Trayder
  • Re: [gmx-users] Distance restraints exploding system Mark Abraham
  • Re: [gmx-users] Distance restraints exploding system Trayder Thomas
  • Re: [gmx-users] Distance restraints exploding system Rafael I. Silverman y de la Vega
  • Re: [gmx-users] Distance restraints exploding system Trayder Thomas
• [gmx-users] Regarding g_densmap output Venkat Reddy
  • Re: [gmx-users] Regarding g_densmap output Chandan Choudhury
  • Re: [gmx-users] Regarding g_densmap output Venkat Reddy
• [gmx-users] Question about HREMD in .log file drew.w.ritchie
  • Re: [gmx-users] Question about HREMD in .log file andrew ritchie
• [gmx-users] efficiency in HPC Albert
  • Re: [gmx-users] efficiency in HPC Prentice Bisbal
  • Re: [gmx-users] efficiency in HPC Albert
  • Re: [gmx-users] efficiency in HPC Mark Abraham
• [gmx-users] Regarding Position restraint and freezegroups rahul seth
  • Re: [gmx-users] Regarding Position restraint and freezegroups Justin Lemkul
  • Re: [gmx-users] Regarding Position restraint and freezegroups rahul seth
  • Re: [gmx-users] Regarding Position restraint and freezegroups Justin Lemkul
• [gmx-users] A question about velocity rescaling thermostat and velocity verlet integrator Ali Sinan Saglam
  • Re: [gmx-users] A question about velocity rescaling thermostat and velocity verlet integrator Michael Shirts
  • Re: [gmx-users] A question about velocity rescaling thermostat and velocity verlet integrator Mark Abraham
  • Re: [gmx-users] A question about velocity rescaling thermostat and velocity verlet integrator Ali Sinan Saglam
• [gmx-users] periodic_molecule & missing interactions Valentina
  • Re: [gmx-users] periodic_molecule & missing interactions Justin Lemkul
  • [gmx-users] Re: periodic_molecule & missing interactions Valentina
  • Re: [gmx-users] Re: periodic_molecule & missing interactions Dr. Vitaly Chaban
• [gmx-users] Cyclodextrin_Ligand_Protein System marawan hussain
• [gmx-users] pdb2gmx breaking bonds Ewa Brylska
  • Re: [gmx-users] pdb2gmx breaking bonds Justin Lemkul
• [gmx-users] Creating an infinite sheet of graphene #TAN BENG HAU IAN#
  • [gmx-users] Re: Creating an infinite sheet of graphene Valentina
  • Re: [gmx-users] Re: Creating an infinite sheet of graphene Justin Lemkul
  • Re: [gmx-users] Creating an infinite sheet of graphene Justin Lemkul
• [gmx-users] MD vs. free energy simulations Jernej Zidar
  • Re: [gmx-users] MD vs. free energy simulations Justin Lemkul
• [gmx-users] ERROR : GROMACS finsihed with error 74 sri2201
  • Re: [gmx-users] ERROR : GROMACS finsihed with error 74 Tsjerk Wassenaar
• [gmx-users] CGennFF in gromacs Golshan Hejazi
  • Re: [gmx-users] CGennFF in gromacs Justin Lemkul
• [gmx-users] problem of submitting job in HPC Albert
  • Re: [gmx-users] problem of submitting job in HPC Justin Lemkul
  • Re: [gmx-users] problem of submitting job in HPC Mark Abraham
  • Re: [gmx-users] problem of submitting job in HPC Albert
• [gmx-users] work in 4.5.5 but failed in 4.6.1 Albert
  • Re: [gmx-users] work in 4.5.5 but failed in 4.6.1 Justin Lemkul
  • Re: [gmx-users] work in 4.5.5 but failed in 4.6.1 Albert
  • Re: [gmx-users] work in 4.5.5 but failed in 4.6.1 Justin Lemkul
  • Re: [gmx-users] work in 4.5.5 but failed in 4.6.1 Albert
  • Re: [gmx-users] work in 4.5.5 but failed in 4.6.1 Justin Lemkul
  • Re: [gmx-users] work in 4.5.5 but failed in 4.6.1 Albert
• [gmx-users] total charge Group Gro
  • Re: [gmx-users] total charge Mark Abraham
• [gmx-users] Long range Lennard Jones Gianluca Interlandi
  • RE: [gmx-users] Long range Lennard Jones Dallas Warren
  • Re: [gmx-users] Long range Lennard Jones Mark Abraham
  • Re: [gmx-users] Long range Lennard Jones rajat desikan
  • Re: [gmx-users] Long range Lennard Jones David van der Spoel
  • Re: [gmx-users] Long range Lennard Jones Mark Abraham
  • Re: [gmx-users] Long range Lennard Jones Gianluca Interlandi
  • Re: [gmx-users] Long range Lennard Jones Justin Lemkul
  • Re: [gmx-users] Long range Lennard Jones Gianluca Interlandi
  • Re: [gmx-users] Long range Lennard Jones Justin Lemkul
  • Re: [gmx-users] Long range Lennard Jones Gianluca Interlandi
  • Re: [gmx-users] Long range Lennard Jones Justin Lemkul
  • Re: [gmx-users] Long range Lennard Jones Michael Shirts
  • Re: [gmx-users] Long range Lennard Jones Gianluca Interlandi
  • Re: [gmx-users] Long range Lennard Jones Justin Lemkul
  • Re: [gmx-users] Long range Lennard Jones Gianluca Interlandi
  • Re: [gmx-users] Long range Lennard Jones Justin Lemkul
  • Re: [gmx-users] Long range Lennard Jones Gianluca Interlandi
  • Re: [gmx-users] Long range Lennard Jones Gianluca Interlandi
  • Re: [gmx-users] Long range Lennard Jones Justin Lemkul
  • Re: [gmx-users] Long range Lennard Jones Gianluca Interlandi
  • Re: [gmx-users] Long range Lennard Jones Justin Lemkul
  • Re: [gmx-users] Long range Lennard Jones Szilárd Páll
• [gmx-users] Genion command not working Deepak Ojha
  • Re: [gmx-users] Genion command not working Tsjerk Wassenaar
• [gmx-users] Gentle heating with implicit solvent Gianluca Interlandi
  • Re: [gmx-users] Gentle heating with implicit solvent Mark Abraham
  • Re: [gmx-users] Gentle heating with implicit solvent Gianluca Interlandi
  • Re: [gmx-users] Gentle heating with implicit solvent Justin Lemkul
  • Re: [gmx-users] Gentle heating with implicit solvent Gianluca Interlandi
  • Re: [gmx-users] Gentle heating with implicit solvent Gianluca Interlandi
• [gmx-users] Wrapping of protein molecules during simulation Gianluca Interlandi
  • Re: [gmx-users] Wrapping of protein molecules during simulation Justin Lemkul
• [gmx-users] Rescale: Cloud simulation platform research grants Ilea Graedel
• [gmx-users] About script for free energy calculation vidhya sankar
  • Re: [gmx-users] About script for free energy calculation Mark Abraham
• [gmx-users] general question about molecule.rtp and pdb2gmx Valentina
  • Re: [gmx-users] general question about molecule.rtp and pdb2gmx Justin Lemkul
  • Re: [gmx-users] general question about molecule.rtp and pdb2gmx Mark Abraham
  • [gmx-users] Re: general question about molecule.rtp and pdb2gmx Valentina
  • Re: [gmx-users] Re: general question about molecule.rtp and pdb2gmx Sergey
  • [gmx-users] Re: general question about molecule.rtp and pdb2gmx Valentina
  • Re: [gmx-users] Re: general question about molecule.rtp and pdb2gmx Justin Lemkul
• [gmx-users] Regarding coordinate mismatching. sanjay choubey
  • Re: [gmx-users] Regarding coordinate mismatching. Justin Lemkul
• [gmx-users] LIGAND TOPOLOGY MUSYOKA THOMMAS
  • Re: [gmx-users] LIGAND TOPOLOGY Justin Lemkul
• [gmx-users] error with g_dist chinnu657
  • Re: [gmx-users] error with g_dist Justin Lemkul
  • [gmx-users] Re: error with g_dist chinnu657
  • Re: [gmx-users] Re: error with g_dist Justin Lemkul
  • [gmx-users] Re: error with g_dist chinnu657
  • Re: [gmx-users] Re: error with g_dist Justin Lemkul
  • [gmx-users] Re: error with g_dist chinnu657
  • Re: [gmx-users] Re: error with g_dist Justin Lemkul
  • [gmx-users] Re: error with g_dist chinnu657

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