Dear Gromacs users, I am analyzing the density of my spherical lipid vesicle using g_densmap tool with the following options.
g_densmap -f vesicle_noPBC.xtc -s vesicle-12us.tpr -n index.ndx -dt 1000 -od -amax 6 -rmax 6 -mirror I am getting densmap.dat as output, which is a text file. How to analyze this text file? Also Please suggest me any tool which can convert this text file to some visually appealing grid map or a 2D (or) 3D graph? Thanks for your valuable time -- With Best Wishes Venkat Reddy Chirasani PhD student Laboratory of Computational Biophysics Department of Biotechnology IIT Madras Chennai INDIA-600036 -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
