Hi, I was planning to use the velocity verlet ingetrator (md-vv) with velocity rescaling thermostat (tcoupl = v-rescale). I know that velocity rescaling thermostat is a stochastic thermostat and uses a random seed and generally with the stochastic thermostats one would use the sd integrator that uses ld-seed = -1 option for a random seed.
I was just wondering if one uses the velocity verlet integrator with a stochastic thermostat does the ld-seed option work as it does with the sd (or bd) integrator? (the manual currently doesn't say anything about this http://manual.gromacs.org/online/mdp_opt.html#run) Best, Ali Sinan Saglam -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
