On 8/31/13 4:54 AM, vidhya sankar wrote:
Dear Jutin and Marks Thnak you for your previous reply
Whrn i run the following job in cluster as follows
[hinditron@compute002 gromacs-plumed-cpu-input]$ mpirun -np 8 -machinefile
~/myhosts mdrun_mpi -s CNTPEPRSOLIONSfullcputest.tpr -v -deffnm
CNTPEPRSOLIONSfull -cpt 2
I have eceived the error as follows
Sisters Have Always Fascinated Me" (Speech)
Error on node 3, will try to stop all the nodes
Halting parallel program mdrun_mpi on CPU 3 out of 8
Halting parallel program mdrun_mpi on CPU 4 out of 8
gcq#33: "Sisters Have Always Fascinated Me" (Speech)
[cli_6]: aborting job:
application called MPI_Abort(MPI_COMM_WORLD, -1) - process 6
gcq#33: "Sisters Have Always Fascinated Me" (Speech)
gcq#33: "Sisters Have Always Fascinated Me" (Speech)
[cli_3]: aborting job:
application called MPI_Abort(MPI_COMM_WORLD, -1) - process 3
[cli_2]:
gcq#33: "Sisters Have Always Fascinated Me" (Speech)
[cli_5]: aborting job:
application called MPI_Abort(MPI_COMM_WORLD, -1) - process 5
aborting job:
application called MPI_Abort(MPI_COMM_WORLD, -1) - process 2
gcq#33: "Sisters Have Always Fascinated Me" (Speech)
[cli_4]: aborting job:
application called MPI_Abort(MPI_COMM_WORLD, -1) - process 4
===================================================
= BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES
= EXIT CODE: 65280
= CLEANING UP REMAINING PROCESSES
= YOU CAN IGNORE THE BELOW CLEANUP MESSAGES
what is the meaning of above error How to solve it?
These are generic mpirun failure messages. The real error is further up in the
screen output or in the .log file.
-Justin
--
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Justin A. Lemkul, Ph.D.
Postdoctoral Fellow
Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 601
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201
jalem...@outerbanks.umaryland.edu | (410) 706-7441
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