Run it again, this time re-directing stderr and stdout to files so that you can read them later. (Google for how to do that with your shell.)
Mark On Sat, Aug 31, 2013 at 1:47 PM, vidhya sankar <scvsankar_...@yahoo.com> wrote: > Thank you justin for your reply > > The error I have pasted here (also pasted in previous mail) > is total screen ouptut. No further output as you stated in previous mail( The > real error is further up in the > screen output or in the .log file.) > > > >> > [hinditron@compute002 gromacs-plumed-cpu-input]$ mpirun -np 8 > -machinefile ~/myhosts mdrun_mpi -s CNTPEPRSOLIONSfullcputest.tpr -v > -deffnm CNTPEPRSOLIONSfull -cpt 2 >> >> I have eceived the error as follows >> Sisters Have Always Fascinated Me" (Speech) >> Error on node 3, will try to stop all the nodes >> Halting parallel program mdrun_mpi on CPU 3 out of 8 >> Halting parallel program mdrun_mpi on CPU 4 out of 8 >> gcq#33: "Sisters Have Always Fascinated Me" (Speech) >> [cli_6]: aborting job: >> application called MPI_Abort(MPI_COMM_WORLD, -1) - process 6 >> gcq#33: "Sisters Have Always Fascinated Me" (Speech) >> gcq#33: "Sisters Have Always Fascinated Me" (Speech) >> [cli_3]: aborting job: >> application called MPI_Abort(MPI_COMM_WORLD, -1) - process 3 >> [cli_2]: >> gcq#33: "Sisters Have Always Fascinated Me" (Speech) >> [cli_5]: aborting job: >> application called MPI_Abort(MPI_COMM_WORLD, -1) - process 5 >> aborting job: >> application called MPI_Abort(MPI_COMM_WORLD, -1) - process 2 >> gcq#33: "Sisters Have Always Fascinated Me" (Speech) >> [cli_4]: aborting job: >> application called MPI_Abort(MPI_COMM_WORLD, -1) - process 4 >> >> =================================================== >> = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES >> = EXIT CODE: 65280 >> = CLEANING UP REMAINING PROCESSES >> = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES >> > you Mailed me this is generic mpirun error (These are generic mpirun > failure messages) But No error message shown in .log file > > > Could you please help to solve this error? > > With Regards > S.Vidhyasankar > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > * Please don't post (un)subscribe requests to the list. Use the > www interface or send it to gmx-users-requ...@gromacs.org. > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
