pymol-users

Messages by Date

2020/01/20 [PyMOL] Issues when displaying surfaces of two objects in two distinct display grids Vedat Durmaz
2020/01/20 Re: [PyMOL] How to print the time stample on each frame of the movie for molecular dynamics trajectory in Pymol? Thomas Holder
2020/01/20 Re: [PyMOL] diaplay actural sizes in Pymol Thomas Holder
2020/01/19 [PyMOL] diaplay actural sizes in Pymol Ting Hu via PyMOL-users
2020/01/17 [PyMOL] Does Pymol perform protein folding to get from a amino acid Edward Montague
2020/01/16 Re: [PyMOL] click and select bug in 2.2 Tamas Hegedus
2020/01/14 [PyMOL] How to print the time stample on each frame of the movie for molecular dynamics trajectory in Pymol? sunyeping via PyMOL-users
2020/01/14 Re: [PyMOL] How to see a homotetramer Roger Rowlett
2020/01/14 Re: [PyMOL] How to see a homotetramer Ali Kusay
2020/01/14 [PyMOL] How to see a homotetramer Clelia Canova
2020/01/10 Re: [PyMOL] click and select bug in 2.2 Thomas Holder
2020/01/10 [PyMOL] click and select bug in 2.2 Tamas Hegedus
2020/01/09 [PyMOL] Display Slabbing and Ray Tracing Mode with Exported Movies Cowan, Richard H. (Dr.)
2020/01/08 Re: [PyMOL] Protonated aspartic acid Neena Susan Eappen
2020/01/07 Re: [PyMOL] Protonated aspartic acid Pedro Lacerda
2020/01/07 [PyMOL] Protonated aspartic acid Neena Susan Eappen
2020/01/06 [PyMOL] Open source build on Windows, watch out for the default path David Mathog
2020/01/06 [PyMOL] Pymol, qt organization question David Mathog
2020/01/06 Re: [PyMOL] User defined variable or property Pedro Lacerda
2020/01/06 [PyMOL] User defined variable or property Pedro Lacerda
2020/01/06 [PyMOL] 13th CCP4/APS Crystallographic School in the US Xu, Qingping via PyMOL-users
2020/01/04 Re: [PyMOL] SOLVED Re: PyMOL 2.3.2 - GUI not printing/returning values when running get, count_atoms etc Aureliano Guedes
2020/01/04 [PyMOL] SOLVED Re: PyMOL 2.3.2 - GUI not printing/returning values when running get, count_atoms etc Joe Kaczmarski
2020/01/04 Re: [PyMOL] PyMOL 2.3.2 - GUI not printing/returning values when running get, count_atoms etc Aureliano Guedes
2020/01/04 [PyMOL] PyMOL 2.3.2 - GUI not printing/returning values when running get, count_atoms etc Joe Kaczmarski
2019/12/20 [PyMOL] 2.4.0.0a oddness when building on Windows. David Mathog
2019/12/18 Re: [PyMOL] Performance of extended commands vs python function Lorenzo Gaifas
2019/12/18 Re: [PyMOL] Performance of extended commands vs python function Thomas Holder
2019/12/17 Re: [PyMOL] Performance of extended commands vs python function Lorenzo Gaifas
2019/12/16 Re: [PyMOL] Performance of extended commands vs python function Thomas Holder
2019/12/16 Re: [PyMOL] Performance of extended commands vs python function Lorenzo Gaifas
2019/12/16 Re: [PyMOL] Performance of extended commands vs python function Thomas Holder
2019/12/13 [PyMOL] Performance of extended commands vs python function Lorenzo Gaifas
2019/12/11 Re: [PyMOL] [EXTERNAL] Differentiate between bond types by color and representation Thomas Holder
2019/12/11 Re: [PyMOL] [EXTERNAL] Differentiate between bond types by color and representation Mooers, Blaine H.M. (HSC)
2019/12/11 Re: [PyMOL] [EXTERNAL] Differentiate between bond types by color and representation Mooers, Blaine H.M. (HSC)
2019/12/11 Re: [PyMOL] [EXTERNAL] Differentiate between bond types by color and representation Lorenzo Gaifas
2019/12/11 [PyMOL] Differentiate between bond types by color and representation Lorenzo Gaifas
2019/12/11 [PyMOL] Conference Announcement: Molecular Modeling Workshop, Feb 17-19, 2020 in Erlangen, Germany Harald Lanig
2019/12/09 [PyMOL] Movie showing a slice-through a cryo-EM map Tomas Malinauskas
2019/12/02 Re: [PyMOL] Pymol APBS plugin error Jack Howarth
2019/12/02 Re: [PyMOL] Pymol APBS plugin error Jack Howarth
2019/12/02 [PyMOL] Pymol APBS plugin error RDirective
2019/12/02 [PyMOL] Crystal Operations from PyMOL Sumit Khadka
2019/11/29 Re: [PyMOL] Calculate the angle between two domains Jared Sampson
2019/11/29 Re: [PyMOL] ModuleNotFoundError: No module named 'pymol._cmd' Markus Heller
2019/11/28 Re: [PyMOL] ModuleNotFoundError: No module named 'pymol._cmd' Thomas Holder
2019/11/28 Re: [PyMOL] Problem loading Amber trajectory Thomas Holder
2019/11/28 Re: [PyMOL] Autosave Thomas Holder
2019/11/28 [PyMOL] Problem loading Amber trajectory Rosellen, Martin
2019/11/28 [PyMOL] ModuleNotFoundError: No module named 'pymol._cmd' Markus Heller
2019/11/27 [PyMOL] Calculate the angle between two domains Zhang Yikan via PyMOL-users
2019/11/22 Re: [PyMOL] Autosave Pedro Lacerda
2019/11/22 Re: [PyMOL] Autosave Pedro Lacerda
2019/11/22 Re: [PyMOL] Autosave Pedro Lacerda
2019/11/22 [PyMOL] Autosave Junsu Park aka. Jason Mosier
2019/11/17 [PyMOL] How to display electronic density for nucleic acid pymol sunyeping via PyMOL-users
2019/11/15 [PyMOL] Admins for Pymol-script-repo needed Thomas Holder
2019/11/13 Re: [PyMOL] Re. Pymol Ray problem Jared Sampson
2019/11/13 [PyMOL] Re. Pymol Ray problem Gadhe Changdev Gorakshnath
2019/11/12 Re: [PyMOL] Pymol Qt Wayland RDirective
2019/11/11 Re: [PyMOL] Get surface coordinates Pedro Lacerda
2019/11/09 Re: [PyMOL] View manger (and how to store arbitrary data on the session?) Pedro Lacerda
2019/11/09 [PyMOL] Show lone pairs Pedro Lacerda
2019/11/05 Re: [PyMOL] Pymol Qt Wayland Thomas Holder
2019/11/05 Re: [PyMOL] Get surface coordinates Pedro Lacerda
2019/11/05 Re: [PyMOL] Get surface coordinates Pedro Lacerda
2019/11/03 Re: [PyMOL] Get surface coordinates Pedro Lacerda
2019/11/02 Re: [PyMOL] About Pymol 2.3 Python Package Pedro Lacerda
2019/11/02 [PyMOL] Pymol Qt Wayland RDirective
2019/11/02 [PyMOL] About Pymol 2.3 Python Package halil ibrahim özdemir
2019/11/01 Re: [PyMOL] Get surface coordinates Jared Sampson
2019/10/31 Re: [PyMOL] Get surface coordinates Pedro Lacerda
2019/10/31 Re: [PyMOL] Get surface coordinates Pedro Lacerda
2019/10/30 Re: [PyMOL] View manger (and how to store arbitrary data on the session?) Pedro Lacerda
2019/10/30 Re: [PyMOL] Get surface coordinates Thomas Holder
2019/10/29 Re: [PyMOL] Get surface coordinates Pedro Lacerda
2019/10/29 [PyMOL] Get surface coordinates Pedro Lacerda
2019/10/23 [PyMOL] Open position for PyMOL Software Engineer Thomas Holder
2019/10/18 Re: [PyMOL] educational PyMOL 1.7.4.5 crashing with Mac Catalina OS 10.15 Pedro Lacerda
2019/10/18 [PyMOL] educational PyMOL 1.7.4.5 crashing with Mac Catalina OS 10.15 Amy C Rosenzweig
2019/10/17 Re: [PyMOL] Drawing lines between residues Robert Campbell
2019/10/17 Re: [PyMOL] Drawing lines between residues Ali Kusay
2019/10/17 Re: [PyMOL] [EXTERNAL] Drawing lines between residues Mooers, Blaine H.M. (HSC)
2019/10/17 [PyMOL] Drawing lines between residues Jorge Fernández de Cossío Díaz
2019/10/17 Re: [PyMOL] dots with/without ray tracing Thomas Holder
2019/10/17 Re: [PyMOL] feature request Thomas Holder
2019/10/12 [PyMOL] RMSD-based clustering tool Neena Susan Eappen
2019/10/06 [PyMOL] Help Vertika Gautam
2019/10/05 Re: [PyMOL] [EXTERNAL] Mac installation error: clang++, segmentation fault 11 Mooers, Blaine H.M. (HSC)
2019/10/05 [PyMOL] Mac installation error: clang++, segmentation fault 11 Sumudu Leelananda
2019/10/02 Re: [PyMOL] feature request Jared Sampson
2019/10/02 Re: [PyMOL] feature request Thomas Holder
2019/10/02 Re: [PyMOL] feature request Jared Sampson
2019/10/01 Re: [PyMOL] feature request Oganesyan, Vaheh
2019/10/01 Re: [PyMOL] feature request Jared Sampson
2019/10/01 Re: [PyMOL] feature request Thomas Holder
2019/09/26 [PyMOL] feature request Oganesyan, Vaheh
2019/09/23 [PyMOL] Schedule Up - 26th Annual Tcl/Tk Conference (Tcl'2019) conference
2019/09/19 Re: [PyMOL] "Qt not available" error from compilation with python2 but not python3 Thomas Holder
2019/09/13 [PyMOL] "Qt not available" error from compilation with python2 but not python3 sunyeping via PyMOL-users
2019/09/13 [PyMOL] APBS TOOLS 2.1 does not work sunyeping via PyMOL-users
2019/09/13 Re: [PyMOL] PyMol: incomplete replacement of b- and q-factors Thomas Holder
2019/09/12 Re: [PyMOL] How to manually define the lower and upper limit of vacuum electrostatics? sunyeping via PyMOL-users
2019/09/12 [PyMOL] PyMol: incomplete replacement of b- and q-factors Heffron, Joseph
2019/09/12 Re: [PyMOL] How to manually define the lower and upper limit of vacuum electrostatics? Marko Hyvonen
2019/09/12 [PyMOL] How to manually define the lower and upper limit of vacuum electrostatics? sunyeping via PyMOL-users
2019/09/11 [PyMOL] MacOS install Enrique Ordaz
2019/09/11 [PyMOL] Membrane protein view according to X/Y axis and to Z=0 with Pymol ABEL Stephane
2019/09/10 Re: [PyMOL] Amber trajectories Piter_
2019/09/10 [PyMOL] Amber trajectories Hira Jabeen
2019/09/09 [PyMOL] 4th Call For Papers - Extended Deadline - 26th Annual Tcl/Tk Conference (Tcl'2019) conference
2019/09/04 Re: [PyMOL] amino acids displayed for mutagenesis. Hyp? PTMs? (Bruce Onisko) Thomas Holder
2019/09/04 Re: [PyMOL] amino acids displayed for mutagenesis. Hyp? PTMs? (Bruce Onisko) Bruce Onisko
2019/08/24 Re: [PyMOL] label color Dyda via PyMOL-users
2019/08/23 [PyMOL] label color Oganesyan, Vaheh
2019/08/22 Re: [PyMOL] How to calculate rmsd between each state of a MD simulation trajectory and a reference structure? Istvan Kolossvary
2019/08/22 Re: [PyMOL] aberrant behavior of mouse clicks in PyMOL Thomas Holder
2019/08/21 Re: [PyMOL] custom labels losing their colors on ray tracing [EXTERNAL] Rochtus, Anne
2019/08/21 [PyMOL] aberrant behavior of mouse clicks in PyMOL Oganesyan, Vaheh
2019/08/21 Re: [PyMOL] custom labels losing their colors on ray tracing Dyda via PyMOL-users
2019/08/21 Re: [PyMOL] HELIX and SHEET records not read by Pymol Chris Fage
2019/08/21 Re: [PyMOL] How to calculate rmsd between each state of a MD simulation trajectory and a reference structure? Thomas Holder
2019/08/21 Re: [PyMOL] HELIX and SHEET records not read by Pymol Thomas Holder
2019/08/21 Re: [PyMOL] custom labels losing their colors on ray tracing Thomas Holder
2019/08/20 [PyMOL] HELIX and SHEET records not read by Pymol Chris Fage
2019/08/19 Re: [PyMOL] How to calculate rmsd between each state of a MD simulation trajectory and a reference structure? sunyeping via PyMOL-users
2019/08/19 [PyMOL] custom labels losing their colors on ray tracing Dyda via PyMOL-users
2019/08/19 Re: [PyMOL] How to calculate rmsd between each state of a MD simulation trajectory and a reference structure? Istvan Kolossvary
2019/08/19 Re: [PyMOL] How to calculate rmsd between each state of a MD simulation trajectory and a reference structure? Mateusz Bieniek
2019/08/19 Re: [PyMOL] How to calculate rmsd between each state of a MD simulation trajectory and a reference structure? sunyeping via PyMOL-users
2019/08/19 Re: [PyMOL] How to calculate rmsd between each state of a MD simulation trajectory and a reference structure? Mateusz Bieniek
2019/08/19 [PyMOL] How to calculate rmsd between each state of a MD simulation trajectory and a reference structure? sunyeping via PyMOL-users
2019/08/16 [PyMOL] Custom plugin requirements Pedro Lacerda
2019/08/15 Re: [PyMOL] How to download and install Pedro Lacerda
2019/08/15 Re: [PyMOL] Label volume Pedro Lacerda
2019/08/15 Re: [PyMOL] count_atoms and states Pedro Lacerda
2019/08/15 Re: [PyMOL] count_atoms and states Thomas Holder
2019/08/15 Re: [PyMOL] Label volume Thomas Holder
2019/08/14 Re: [PyMOL] PyMOL-users Digest, How to download and install (Pedro Lacerda) ahoneg
2019/08/14 [PyMOL] How to download and install Pedro Lacerda
2019/08/12 [PyMOL] 3rd Call For Papers - 26th Annual Tcl/Tk Conference (Tcl'2019) conference
2019/08/12 Re: [PyMOL] Label volume Pedro Lacerda
2019/08/12 [PyMOL] Label volume Pedro Lacerda
2019/08/12 Re: [PyMOL] count_atoms and states Christian "Cole" French
2019/08/09 Re: [PyMOL] count_atoms and states Pedro Lacerda
2019/08/09 Re: [PyMOL] count_atoms and states Christian "Cole" French
2019/08/09 Re: [PyMOL] count_atoms and states Pedro Lacerda
2019/08/09 Re: [PyMOL] count_atoms and states Pedro Lacerda
2019/08/09 [PyMOL] count_atoms and states Pedro Lacerda
2019/08/07 [PyMOL] Cavity detection radius and cavity detection cutoff Hyun
2019/08/07 [PyMOL] APBS "%x format: an integer is required, not float" error in pymol installed with python 3.7 and "Qt not available, using GLUT/Tk interface" error sunyeping via PyMOL-users
2019/08/05 Re: [PyMOL] Selection algebra Pedro Lacerda
2019/08/05 Re: [PyMOL] Selection algebra Christian "Cole" French
2019/08/05 Re: [PyMOL] Selection algebra Pedro Lacerda
2019/08/05 Re: [PyMOL] Selection algebra Christian "Cole" French
2019/08/05 Re: [PyMOL] Selection algebra Pedro Lacerda
2019/08/02 Re: [PyMOL] Selection algebra Christian "Cole" French
2019/08/02 Re: [PyMOL] Selection algebra Christian "Cole" French
2019/08/02 [PyMOL] Selection algebra Pedro Lacerda
2019/08/01 [PyMOL] pymol2 and multiprocessing issues Pedro Lacerda
2019/07/31 Re: [PyMOL] how to delete frames from a trajectory loaded by the "load_traj" command? Mateusz Bieniek
2019/07/30 [PyMOL] how to delete frames from a trajectory loaded by the "load_traj" command? sunyeping via PyMOL-users
2019/07/23 [PyMOL] Customizing label using cmd.label() 유재원
2019/07/22 [PyMOL] amino acids displayed for mutagenesis. Hyp? PTMs? (Bruce Onisko) ahoneg
2019/07/21 [PyMOL] amino acids displayed for mutagenesis. Hyp? PTMs? Bruce Onisko
2019/07/18 Re: [PyMOL] [EXTERNAL] Re: Skip Activation Window Remove Mooers, Blaine H.M. (HSC)
2019/07/18 Re: [PyMOL] Skip Activation Window Remove Rohan Eapen
2019/07/17 Re: [PyMOL] Skip Activation Window Remove Saurabh Gayali
2019/07/17 [PyMOL] Skip Activation Window Remove Neena Susan Eappen
2019/07/12 Re: [PyMOL] Plugin upload. Thomas Holder
2019/07/12 Re: [PyMOL] Plugin upload. Thomas Holder
2019/07/12 Re: [PyMOL] Plugin upload. Wael Azzam via PyMOL-users
2019/07/11 Re: [PyMOL] Plugin upload. William Tao
2019/07/11 Re: [PyMOL] PyMOL-users Digest, Vol 158, Issue 13 ahoneg
2019/07/10 [PyMOL] about cealign and align sunyeping via PyMOL-users
2019/07/09 Re: [PyMOL] Align more than two structures Saurabh Gayali
2019/07/09 [PyMOL] Align more than two structures Neena Susan Eappen
2019/07/09 Re: [PyMOL] Search error in PyMOLWiki Jason Key
2019/07/09 [PyMOL] Plugin upload. Wael Azzam via PyMOL-users
2019/07/08 Re: [PyMOL] The 'select' command for complex residue selection Thomas Holder
2019/07/08 Re: [PyMOL] The 'select' command for complex residue selection sunyeping via PyMOL-users
2019/07/08 Re: [PyMOL] The 'select' command for complex residue selection Kevin Jude
2019/07/08 Re: [PyMOL] The 'select' command for complex residue selection Ali Kusay
2019/07/08 [PyMOL] The 'select' command for complex residue selection sunyeping via PyMOL-users
2019/07/08 [PyMOL] How to calculate RMSD among multiple proteins sunyeping via PyMOL-users
2019/07/08 Re: [PyMOL] How to label secondary structures in pymol sunyeping via PyMOL-users
2019/07/08 Re: [PyMOL] PyMOL-users Digest, Vol 158, Issue 6 ahoneg
2019/07/07 Re: [PyMOL] Errors in "Label" page on PyMOL Wiki Thomas Holder
2019/07/07 [PyMOL] Errors in "Label" page on PyMOL Wiki Jared Sampson
2019/07/07 Re: [PyMOL] How to label secondary structures in pymol Jared Sampson
2019/07/07 [PyMOL] How to label secondary structures in pymol sunyeping via PyMOL-users
2019/07/06 Re: [PyMOL] How to color stick and surface representation separately sunyeping via PyMOL-users
2019/07/06 Re: [PyMOL] How to color stick and surface representation separately Saurabh Gayali
2019/07/06 [PyMOL] How to color stick and surface representation separately sunyeping via PyMOL-users
2019/07/05 [PyMOL] Search error in PyMOLWiki Timofey Tyugashev
2019/07/03 Re: [PyMOL] . Saurabh Gayali
2019/07/03 [PyMOL] . O.L. Simpson
2019/07/03 Re: [PyMOL] Export molecule does not keep COLOUR* changes - RESOLVED Saurabh Gayali
2019/06/27 [PyMOL] Export molecule does not keep COLOUR* changes - RESOLVED Sarameri, Jesse