yes, it should. You should just be able to do a "put"
On Fri, 1 Dec 2017,
Michelle VanTieghem wrote:
Hi,
I am confused by the instructions for the ftp. Once I am logged into the ftp
and have navigated to the transfer/incoming
directory, how am I supposed to find / access the file that I would ike to send
through? Does terminal still recognize my
working directory before I logged into the ftp?
Thanks!
Michelle
On Sat, Nov 18, 2017 at 2:54 PM, Bruce Fischl <fis...@nmr.mgh.harvard.edu>
wrote:
Hi Michelle
probably best to tar and gzip the entire subject directory and ftp it to
us:
https://surfer.nmr.mgh.harvard.edu/fswiki/FtpFileExchange
cheers
Bruce
On Sat, 18 Nov 2017, Michelle VanTieghem wrote:
Hi,
Yes I can send you the data - should I just attach the mprage file
in the email, or is there
another
way to share the data with freesurfer? Also, should I send one scan
or multiple scans?
Thanks,
Michelle
On Sat, Nov 18, 2017 at 10:37 AM, Bruce Fischl
<fis...@nmr.mgh.harvard.edu> wrote:
Hi Michelle
are you doing anything out of the ordinary? Do you want to
send us a dataset and we will
take a look? I don't think 6.0 is very different from 5.3 in
regard to skull stripping,
although it is probably a bit better
Bruce
On Fri, 17 Nov 2017, Michelle VanTieghem wrote:
Hello,
I have posted several times about problems with
skull-stripping with our
dataset. We have tried gcut
and multiple other options in other packages (AFNI,
FSL, ANTS) to remove
skull from structural
images in our dataset with little success.
Recently, a colleague suggested this may be due to
versions: that 6.0 deals
with skull stripping
much better than 5.3.
I wanted to ask if indeed this could be the case
before I go install 6.0
and re-run everything in
my study.
Thank you,
Michelle
--
Michelle VanTieghem
PhD student in Psychology
Developmental Affective Neuroscience Lab
Columbia University
mrv2...@columbia.edu
The information in this e-mail is intended only for the person to
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--
Michelle VanTieghem
PhD student in Psychology
Developmental Affective Neuroscience Lab
Columbia University
mrv2...@columbia.edu
--
Michelle VanTieghem
PhD student in Psychology
Developmental Affective Neuroscience Lab
Columbia University
mrv2...@columbia.edu
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