Hi, Can I modify the colour table of an annotation file? Apparently there is an embedded colour table in annotation files.
Allie On Wed, Mar 9, 2011 at 1:07 PM, Douglas N Greve <gr...@nmr.mgh.harvard.edu>wrote: > It will eliminate them from the annotation which should mean that those > areas should be transparent. > doug > > Allie Rosen wrote: > >> Hi Doug, >> >> Thanks for the response. Do those commands make the annotations/labels >> transparent? >> >> Allie >> >> >> >> On Tue, Mar 8, 2011 at 10:58 PM, Douglas Greve >> <gr...@nmr.mgh.harvard.edu<mailto: >> gr...@nmr.mgh.harvard.edu>> wrote: >> >> I've never used that, but you can use mris_annotation2label to >> break the annotation in to individual labels,then use >> mris_label2annot to put the ones you want back together. >> >> doug >> >> >> On 3/8/11 10:13 PM, Allie Rosen wrote: >> >>> Hi Everyone, >>> >>> I'm wondering if it is possible to use the "cut" function in >>> TkSurfer to delete specific atlas annotations. For example, can I >>> create a label of my specific area of interest, inverse the label >>> to highlight the rest of the brain, and then either cut out these >>> regions or make them transparent? >>> >>> Can anyone help me out? >>> >>> Thank you, >>> >>> Allie Rosen, MSc >>> Graduate Student, Department of Neurosurgery >>> Toronto Western Hospital 14-327 399 Bathurst St. >>> University of Toronto >>> _______________________________________________ >>> Freesurfer mailing list >>> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu >>> > >>> >>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> >> >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >> The information in this e-mail is intended only for the person to >> whom it is >> addressed. If you believe this e-mail was sent to you in error and >> the e-mail >> contains patient information, please contact the Partners >> Compliance HelpLine at >> http://www.partners.org/complianceline . If the e-mail was sent to >> you in error >> but does not contain patient information, please contact the >> sender and properly >> dispose of the e-mail. >> >> >> > -- > Douglas N. Greve, Ph.D. > MGH-NMR Center > > gr...@nmr.mgh.harvard.edu > Phone Number: 617-724-2358 Fax: 617-726-7422 > > Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html > >
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