Hi Doug,

Thanks for the response. Do those commands make the annotations/labels
transparent?

Allie



On Tue, Mar 8, 2011 at 10:58 PM, Douglas Greve <gr...@nmr.mgh.harvard.edu>wrote:

>  I've never used that, but you can use mris_annotation2label to break the
> annotation in to individual labels,then use mris_label2annot to put the ones
> you want back together.
>
> doug
>
>
> On 3/8/11 10:13 PM, Allie Rosen wrote:
>
> Hi Everyone,
>
>  I'm wondering if it is possible to use the "cut" function in TkSurfer to
> delete specific atlas annotations. For example, can I create a label of my
> specific area of interest, inverse the label to highlight the rest of the
> brain, and then either cut out these regions or make them transparent?
>
>  Can anyone help me out?
>
>  Thank you,
>
>  Allie Rosen, MSc
> Graduate Student, Department of Neurosurgery
> Toronto Western Hospital 14-327
> 399 Bathurst St.
> University of Toronto
>
>
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