bioc-devel  

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• • Re: [Bioc-devel] Adding package to long tests Jennifer Wokaty
• [Bioc-devel] BioConductor package vulnerabilities to R-spatial evolution process Roger Bivand
• [Bioc-devel] fail to register as a maintainer Pan, Yue via Bioc-devel
  • Re: [Bioc-devel] fail to register as a maintainer Kern, Lori
• [Bioc-devel] Single Package Builder and BiocCheck Kern, Lori
• [Bioc-devel] Adding Xiuyu as maintainer for EBSeq Ning Leng
  • Re: [Bioc-devel] Adding Xiuyu as maintainer for EBSeq Kern, Lori
• [Bioc-devel] Bioc2023 Award Nomination Deadline is tomorrow! Kern, Lori
• [Bioc-devel] Reminder: BioC2023, Awards, TAB Deadline approaching - May 31st! Maria . Doyle
• [Bioc-devel] there is no package called ‘BiocStyle’ Vladimir Kiselev
  • Re: [Bioc-devel] there is no package called ‘BiocStyle’ Vincent Carey
  • Re: [Bioc-devel] there is no package called ‘BiocStyle’ Kern, Lori
  • Re: [Bioc-devel] there is no package called ‘BiocStyle’ Vladimir Kiselev
• [Bioc-devel] No vignette Kristoffer Vitting-Seerup
  • Re: [Bioc-devel] No vignette Kern, Lori
• [Bioc-devel] rifiComparative Loubna Youssar
  • Re: [Bioc-devel] rifiComparative Sarvesh Nikumbh
  • Re: [Bioc-devel] rifiComparative Vincent Carey
• [Bioc-devel] issue with .local() hack used in S4 methods Hervé Pagès
  • Re: [Bioc-devel] issue with .local() hack used in S4 methods Martin Maechler
  • Re: [Bioc-devel] issue with .local() hack used in S4 methods Hervé Pagès
  • Re: [Bioc-devel] issue with .local() hack used in S4 methods Hervé Pagès
• [Bioc-devel] compilation of a package Franck RICHARD
  • Re: [Bioc-devel] compilation of a package Kern, Lori
• [Bioc-devel] Single Package Builder for New Submission Kern, Lori
  • [Bioc-devel] Single Package Builder for new submission Kern, Lori via Bioc-devel
• [Bioc-devel] Empty DataFrame Causes SummarizedExperiment Constructor Error Dario Strbenac via Bioc-devel
  • Re: [Bioc-devel] Empty DataFrame Causes SummarizedExperiment Constructor Error Hervé Pagès
  • Re: [Bioc-devel] Empty DataFrame Causes SummarizedExperiment Constructor Error Robert Castelo
  • Re: [Bioc-devel] Empty DataFrame Causes SummarizedExperiment Constructor Error Hervé Pagès
• [Bioc-devel] _R_CHECK_SUGGESTS_ONLY_ reinstated on release Jennifer Wokaty
• [Bioc-devel] Bioconductor packages released: archive Lluís Revilla
• [Bioc-devel] TREG git push request access Leonardo Collado Torres
  • Re: [Bioc-devel] TREG git push request access Lori Shepherd
• [Bioc-devel] qsvaR git access update request Leonardo Collado Torres
• [Bioc-devel] Bioconductor Technical Advisory Board Nominations Open Charlotte Soneson
• [Bioc-devel] BiocManager::install Wolfgang Huber
  • Re: [Bioc-devel] BiocManager::install Martin Morgan
  • Re: [Bioc-devel] BiocManager::install Vincent Carey
  • Re: [Bioc-devel] BiocManager::install Wolfgang Huber
  • Re: [Bioc-devel] BiocManager::install Martin Morgan
  • Re: [Bioc-devel] BiocManager::install Wolfgang Huber
  • Re: [Bioc-devel] BiocManager::install Martin Maechler
  • Re: [Bioc-devel] BiocManager::install Kasper Daniel Hansen
  • Re: [Bioc-devel] BiocManager::install Wolfgang Huber
  • Re: [Bioc-devel] BiocManager::install Kasper Daniel Hansen
  • Re: [Bioc-devel] BiocManager::install Wolfgang Huber
  • Re: [Bioc-devel] BiocManager::install Klaus Schliep
  • Re: [Bioc-devel] BiocManager::install Wolfgang Huber
• [Bioc-devel] Participating in the development of Bioconductor Franck RICHARD
  • Re: [Bioc-devel] Participating in the development of Bioconductor Vincent Carey
  • Re: [Bioc-devel] Participating in the development of Bioconductor Neumann, Steffen
• [Bioc-devel] Error pushing changes to upstream Gaurav Sharma via Bioc-devel
  • Re: [Bioc-devel] Error pushing changes to upstream Kern, Lori
  • Re: [Bioc-devel] Error pushing changes to upstream Gaurav Sharma via Bioc-devel
  • Re: [Bioc-devel] Error pushing changes to upstream Kern, Lori
• [Bioc-devel] Version Bumped Packages for Mac Intel and Mac Silicon binaries with bad dynamic links Jennifer Wokaty
• [Bioc-devel] Changing Maintainer Email Addresses Augustin Luna
  • Re: [Bioc-devel] Changing Maintainer Email Addresses Kasper Daniel Hansen
• [Bioc-devel] Going "nuclear" with `lfa` and `gcatest` packages Alex Ochoa, Ph.D.
  • Re: [Bioc-devel] Going "nuclear" with `lfa` and `gcatest` packages Kern, Lori
• [Bioc-devel] RforProteomics: vignette error - cannot find the file(s) Laurent Gatto
  • Re: [Bioc-devel] RforProteomics: vignette error - cannot find the file(s) Oleksii Nikolaienko
  • Re: [Bioc-devel] RforProteomics: vignette error - cannot find the file(s) Laurent Gatto
• [Bioc-devel] TCGAbiolinks fails Elizabeth Cattaneo
  • Re: [Bioc-devel] TCGAbiolinks fails Kern, Lori
  • Re: [Bioc-devel] TCGAbiolinks fails Vincent Carey
  • Re: [Bioc-devel] TCGAbiolinks fails Dario Strbenac via Bioc-devel
  • Re: [Bioc-devel] TCGAbiolinks fails Tiago Chedraoui Silva
• [Bioc-devel] Include your Bioconductor tutorial in Smörgåsbord 2023, May 22-26! Maria . Doyle
• [Bioc-devel] Bioconductor 3.17 is Released! Kern, Lori
• [Bioc-devel] git protocol version 2 at https://git.bioconductor.org Gábor Csárdi
  • Re: [Bioc-devel] git protocol version 2 at https://secure-web.cisco.com/1CSFfJvkfdGGS7fPTJpMEvVMnZLLYWeP-njG_JB0V-1Hs9oht3ioNshKZPY424nsViVWgaT7nK4AvxjRX-RYuKg_tNXkOpO2v8z5PuviFs_upbJf77KaGTBXIQGdlIRe0PI6q1V_TVrub-gKa4ymoYILpfucGgBJXM10-2emamSi5MGiqbtm... Kern, Lori
• [Bioc-devel] Bioconductor Mirrors - Important Updates During Release Time Kern, Lori
  • Re: [Bioc-devel] Bioconductor Mirrors - Important Updates During Release Time Kern, Lori
  • [Bioc-devel] Bioconductor Mirrors - Important Updates During Release Time Kern, Lori via Bioc-devel
  • [Bioc-devel] Bioconductor Mirrors - Important Updates During Release Time Kern, Lori via Bioc-devel
  • [Bioc-devel] Bioconductor Mirrors - Important Updates During Release Time Kern, Lori via Bioc-devel
• [Bioc-devel] RELEASE_3_17 branch is now available and push access is re-enabled Kern, Lori
• [Bioc-devel] All commits to Bioconductor stopped from 8:30 am ET for release Kern, Lori
• [Bioc-devel] Last day to make commits before Bioconductor RELEASE 3.17 Kern, Lori
• [Bioc-devel] Package naming Thomas Ashhurst via Bioc-devel
  • Re: [Bioc-devel] Package naming Kern, Lori
• [Bioc-devel] Package passing on linux machine, Vignette can't find functions on Windows. jermiah joseph
• [Bioc-devel] Can't reproduce a latex error Wiel, M.A. van de (Mark)
  • Re: [Bioc-devel] Can't reproduce a latex error Mike Smith
• [Bioc-devel] maintenance question Michael Shapiro
  • Re: [Bioc-devel] maintenance question Kern, Lori
  • Re: [Bioc-devel] maintenance question James W. MacDonald
• [Bioc-devel] Windows build error RAN HU
  • Re: [Bioc-devel] Windows build error RAN HU
  • Re: [Bioc-devel] Windows build error Jennifer Wokaty
• [Bioc-devel] Package build on Windows Error. jermiah joseph
  • Re: [Bioc-devel] Package build on Windows Error. Kern, Lori
• [Bioc-devel] Request for advice on ANCOMBC package error messages in Linux platform Huang Lin (Frederick)
  • Re: [Bioc-devel] Request for advice on ANCOMBC package error messages in Linux platform James W. MacDonald
• [Bioc-devel] Important Bioconductor Release 3.17 deadlines this week Kern, Lori
• [Bioc-devel] [deconvR] Issue with version İrem B . Gündüz
  • Re: [Bioc-devel] [deconvR] Issue with version Kern, Lori
• [Bioc-devel] [gDRtestData] fatal: Could not read from remote repository Arek Gładki
  • Re: [Bioc-devel] [gDRtestData] fatal: Could not read from remote repository Arek Gładki
  • Re: [Bioc-devel] [gDRtestData] fatal: Could not read from remote repository Kern, Lori
• [Bioc-devel] Nominations for Bioconductor 2023 Awards! Kern, Lori
• [Bioc-devel] /home/biocbuild/bbs-3.17-bioc/R/bin/R: not found Arek Gładki
  • Re: [Bioc-devel] /home/biocbuild/bbs-3.17-bioc/R/bin/R: not found Jennifer Wokaty
• [Bioc-devel] triggering the builds for the submitted packages Arek Gładki
  • Re: [Bioc-devel] triggering the builds for the submitted packages Kern, Lori
• [Bioc-devel] taking over package, fixing build error Evan Biederstedt
  • Re: [Bioc-devel] taking over package, fixing build error Kern, Lori
  • Re: [Bioc-devel] taking over package, fixing build error Kern, Lori
  • Re: [Bioc-devel] taking over package, fixing build error Evan Biederstedt
• [Bioc-devel] TIMEOUT on merida1 on devel Nils Eling
• [Bioc-devel] git access Kern, Lori
• [Bioc-devel] Need help with the maintenance of package SCBN 朱家嫡 via Bioc-devel
  • Re: [Bioc-devel] Need help with the maintenance of package SCBN Kern, Lori
• [Bioc-devel] extraChIPs builds failing on palamino3 and merida1 Stevie Pederson
  • Re: [Bioc-devel] extraChIPs builds failing on palamino3 and merida1 Stevie Pederson
• [Bioc-devel] Problem with the submission of the related packages Arek Gładki
  • Re: [Bioc-devel] Problem with the submission of the related packages Kern, Lori
  • Re: [Bioc-devel] Problem with the submission of the related packages Arek Gładki
• [Bioc-devel] missing packages on nebbiolo1 Kevin Horan
  • Re: [Bioc-devel] missing packages on nebbiolo1 Henrik Bengtsson
• [Bioc-devel] Problem in merida1 José Luiz Rybarczyk Filho
  • Re: [Bioc-devel] Problem in merida1 Jennifer Wokaty
• [Bioc-devel] Release_3_16 branch is now frozen. Kern, Lori
• [Bioc-devel] List of Deprecated Packages for Bioc3.17 Kern, Lori
• [Bioc-devel] RELEASE_3_16 branch freeze at 12 pm EDT today. Kern, Lori
• [Bioc-devel] Commit access for package projectR Gaurav Sharma via Bioc-devel
  • Re: [Bioc-devel] Commit access for package projectR Kern, Lori
  • Re: [Bioc-devel] Commit access for package projectR Genevieve Stein-O'Brien
• [Bioc-devel] Fwd: philr problems reported in the Multiple platform build/check report for BioC 3.17 Justin Silverman
  • Re: [Bioc-devel] Fwd: philr problems reported in the Multiple platform build/check report for BioC 3.17 Oleksii Nikolaienko
  • Re: [Bioc-devel] Fwd: philr problems reported in the Multiple platform build/check report for BioC 3.17 Robert M. Flight
  • Re: [Bioc-devel] Fwd: philr problems reported in the Multiple platform build/check report for BioC 3.17 Justin Silverman
• [Bioc-devel] orthogene: killed while reading tree Brian Schilder
  • Re: [Bioc-devel] orthogene: killed while reading tree Kern, Lori
  • Re: [Bioc-devel] orthogene: killed while reading tree Brian Schilder
• [Bioc-devel] Bad description file matine rb
  • Re: [Bioc-devel] EXTERNAL: Bad description file Ramos Perez, Marcel
  • Re: [Bioc-devel] Bad description file Martin Morgan
  • Re: [Bioc-devel] EXTERNAL: Re: Bad description file Ramos Perez, Marcel
  • Re: [Bioc-devel] EXTERNAL: Re: Bad description file matine rb
• [Bioc-devel] Fixing autonomics - ssh: connect to host git.bioconductor.org port 22: Connection timed out Aditya Bhagwat via Bioc-devel
  • Re: [Bioc-devel] Fixing autonomics - ssh: connect to host git.bioconductor.org port 22: Connection timed out Sarvesh Nikumbh
  • Re: [Bioc-devel] Fixing autonomics - ssh: connect to host git.bioconductor.org port 22: Connection timed out Aditya Bhagwat via Bioc-devel
  • Re: [Bioc-devel] Fixing autonomics - ssh: connect to host git.bioconductor.org port 22: Connection timed out Kern, Lori
  • Re: [Bioc-devel] Fixing autonomics - ssh: connect to host git.bioconductor.org port 22: Connection timed out Aditya Bhagwat via Bioc-devel
  • Re: [Bioc-devel] Fixing autonomics - ssh: connect to host git.bioconductor.org port 22: Connection timed out Kern, Lori
  • Re: [Bioc-devel] Fixing autonomics - ssh: connect to host git.bioconductor.org port 22: Connection timed out Aditya Bhagwat via Bioc-devel
• [Bioc-devel] BIoconductor 3.16 Code Freeze Kern, Lori
• [Bioc-devel] Missing dependency errors on nebbiolo1 (Bioc 3.17) Rainer Johannes
  • Re: [Bioc-devel] Missing dependency errors on nebbiolo1 (Bioc 3.17) Oleksii Nikolaienko
  • Re: [Bioc-devel] Missing dependency errors on nebbiolo1 (Bioc 3.17) Henrik Bengtsson
  • Re: [Bioc-devel] Missing dependency errors on nebbiolo1 (Bioc 3.17) Rainer Johannes
• [Bioc-devel] About an error in the Multiple platform build/check report for BioC 3.17 You Zhou
  • Re: [Bioc-devel] About an error in the Multiple platform build/check report for BioC 3.17 Kern, Lori
• [Bioc-devel] rowSums, colSums, rowMeans, colMeans generics moved from BiocGenerics to MatrixGenerics Hervé Pagès
• [Bioc-devel] httr::GET() problem downloading a ExperimentHub resource Robert Castelo
  • Re: [Bioc-devel] httr::GET() problem downloading a ExperimentHub resource Martin Morgan
  • Re: [Bioc-devel] httr::GET() problem downloading a ExperimentHub resource Robert Castelo
  • Re: [Bioc-devel] httr::GET() problem downloading a ExperimentHub resource Martin Morgan
  • Re: [Bioc-devel] httr::GET() problem downloading a ExperimentHub resource Robert Castelo
• [Bioc-devel] Important Bioconductor Release Deadlines Kern, Lori
  • [Bioc-devel] Important Bioconductor Release Deadlines Kern, Lori via Bioc-devel
  • [Bioc-devel] Important Bioconductor Release Deadlines Kern, Lori via Bioc-devel
  • [Bioc-devel] Important Bioconductor Release Deadlines Kern, Lori via Bioc-devel
  • Re: [Bioc-devel] Important Bioconductor Release Deadlines Anatoly Sorokin
  • Re: [Bioc-devel] Important Bioconductor Release Deadlines Henrik Bengtsson
  • Re: [Bioc-devel] Important Bioconductor Release Deadlines Anatoly Sorokin
  • Re: [Bioc-devel] Important Bioconductor Release Deadlines Henrik Bengtsson
  • Re: [Bioc-devel] Important Bioconductor Release Deadlines Anatoly Sorokin
  • Re: [Bioc-devel] Important Bioconductor Release Deadlines Kasper Daniel Hansen
  • Re: [Bioc-devel] Important Bioconductor Release Deadlines Levi Waldron
  • Re: [Bioc-devel] Important Bioconductor Release Deadlines Anatoly Sorokin
  • Re: [Bioc-devel] Important Bioconductor Release Deadlines Vincent Carey
  • Re: [Bioc-devel] Important Bioconductor Release Deadlines Kern, Lori via Bioc-devel
  • Re: [Bioc-devel] Important Bioconductor Release Deadlines Henrik Bengtsson
  • [Bioc-devel] Important Bioconductor Release Deadlines Kern, Lori via Bioc-devel
  • [Bioc-devel] Important Bioconductor Release Deadlines Kern, Lori via Bioc-devel
  • [Bioc-devel] Important Bioconductor Release Deadlines Kern, Lori via Bioc-devel
  • [Bioc-devel] Important Bioconductor Release Deadlines Kern, Lori via Bioc-devel
  • Re: [Bioc-devel] Important Bioconductor Release Deadlines Kern, Lori via Bioc-devel
• [Bioc-devel] I cannot log into my Bioconductor Git Credentials Sara Stankiewicz
  • Re: [Bioc-devel] I cannot log into my Bioconductor Git Credentials Kern, Lori
• [Bioc-devel] _R_CHECK_SUGGESTS_ONLY=true Jennifer Wokaty
• [Bioc-devel] Push changes to release branch matine rb
  • Re: [Bioc-devel] Push changes to release branch Jennifer Wokaty
  • Re: [Bioc-devel] Push changes to release branch matine rb
• [Bioc-devel] Problem updating package Sonia Tarazona
  • Re: [Bioc-devel] Problem updating package Kern, Lori
• [Bioc-devel] New Package Submission Deadline this Friday for Bioconductor 3.17 Kern, Lori
• [Bioc-devel] "Graphics API version mismatch": Devel package check on macOS failing Sarvesh Nikumbh
  • Re: [Bioc-devel] "Graphics API version mismatch": Devel package check on macOS failing Jennifer Wokaty
• [Bioc-devel] Please deprecate NxtIRFcore Alex Wong via Bioc-devel
  • Re: [Bioc-devel] Please deprecate NxtIRFcore Kern, Lori
• [Bioc-devel] Deprecation of package chromswitch Selin Jessa
  • Re: [Bioc-devel] Deprecation of package chromswitch Kern, Lori
• [Bioc-devel] surfaltr build on Bioc 3.17 error advice Pooja Gangras
  • Re: [Bioc-devel] surfaltr build on Bioc 3.17 error advice Hervé Pagès
  • Re: [Bioc-devel] surfaltr build on Bioc 3.17 error advice Pooja Gangras

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