I noticed that my prior message was mangled by outlook and so resending from gmail. Thanks.
I cloned the repo afresh and set up the remote. seshanv@omega0:~/GitRepos/Bioc/DNAcopy$ git remote -v origin g...@github.com:veseshan/DNAcopy.git (fetch) origin g...@github.com:veseshan/DNAcopy.git (push) upstream g...@git.bioconductor.org:packages/DNAcopy.git (fetch) upstream g...@git.bioconductor.org:packages/DNAcopy.git (push) I can run git diff and with upstream and it shows the differences as it should be seshanv@omega0:~/GitRepos/Bioc/DNAcopy$ git diff devel upstream/devel | head -12 diff --git a/DESCRIPTION b/DESCRIPTION index a0219f9..c7c59a3 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,6 +1,6 @@ Package: DNAcopy -Title: DNA Copy Number Data Analysis -Version: 1.75.2 +Title: DNA copy number data analysis +Version: 1.75.1 Author: Venkatraman E. Seshan, Adam Olshen Description: Implements the circular binary segmentation (CBS) I have ensured Github has both my RSA and ED25519 keys and I can push to my repo and it uses SSH key appropriately. seshanv@omega0:~/GitRepos/Bioc/DNAcopy$ git push Warning: Permanently added the ECDSA host key for IP address '140.82.112.3' to the list of known hosts. Enumerating objects: 5, done. Counting objects: 100% (5/5), done. Delta compression using up to 16 threads Compressing objects: 100% (3/3), done. Writing objects: 100% (3/3), 331 bytes | 331.00 KiB/s, done. Total 3 (delta 2), reused 0 (delta 0), pack-reused 0 remote: Resolving deltas: 100% (2/2), completed with 2 local objects. To github.com:veseshan/DNAcopy.git cdd8cfd..f953003 devel -> devel I confirmed that BiocCredentials has the SSH keys . However I am getting the same error when I try to push upstream seshanv@omega0:~/GitRepos/Bioc/DNAcopy$ git push upstream devel FATAL: W any packages/DNAcopy venka...@mskcc.org DENIED by fallthru (or you mis-spelled the reponame) fatal: Could not read from remote repository. Please make sure you have the correct access rights and the repository exists. I can’t figure out what the issue is. Thanks On Wed, Jun 28, 2023 at 7:29 AM Kern, Lori <lori.sheph...@roswellpark.org> wrote: > I'm not sure why the upstream has a mailto: at the start but perhaps try > resetting upstream to `g...@git.bioconductor.org: > packages/DNAcopy.git<mailto:g...@git.bioconductor.org > :packages/DNAcopy.git>` > > The credentials are set up correctly. Perhaps also adding a new ssh key to > the BiocCredentials account might be necessary? > > Cheers, > > > > Lori Shepherd - Kern > > Bioconductor Core Team > > Roswell Park Comprehensive Cancer Center > > Department of Biostatistics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > > ________________________________ > From: Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of Seshan, > Venkatraman <sesh...@mskcc.org> > Sent: Tuesday, June 27, 2023 5:53 PM > To: bioc-devel@r-project.org <bioc-devel@r-project.org> > Subject: [Bioc-devel] DNAcopy git push issue > > After a long time of not needing any change to the package I tried to push > changes upstream and got the following error: > > seshanv@omega0:~/GitRepos/DNAcopy$ git push upstream devel > FATAL: W any packages/DNAcopy mailto:venka...@mskcc.org DENIED by fallthru > (or you mis-spelled the reponame) > fatal: Could not read from remote repository. > > Please make sure you have the correct access rights > and the repository exists. > --------------------------------------------------------- > > I haven't had the email address venka...@mskcc.org since 2007. The git > remotes are correct > > seshanv@omega0:~/GitRepos/DNAcopy$ git remote -v > origin > https://secure-web.cisco.com/13GYvlJCqh6qE2EmB3eN4Edje-48SQ9VP9RDQxi8R6smN7YMfzSwExzwR71KtQC68TU3j87nJWZaQHYO9a3rbbPdF3BlW9ZcLSQEc4_xNtXCvcr7t55RYnLObQ0HqTdQeMME0pMgsINGhJUwFd3jTZvZM84FXKyIRiWpKDCqrzROjERuTjqrpnbWjvIDPM0ms5nZrKow2sZx3HZ3zjOnHGdhl5TU872hM5LOtQ4H_Yl8iTkNDoyNPYceSt_8I9yReZ50DjFAdK6Rx2sGoQW_gFl70SS1OrIYpUzbBuO4sN-IM84-6pPEB4JlF1clbBzm-/https%3A%2F%2Fgithub.com%2Fveseshan%2FDNAcopy.git > (fetch) > origin > https://secure-web.cisco.com/13GYvlJCqh6qE2EmB3eN4Edje-48SQ9VP9RDQxi8R6smN7YMfzSwExzwR71KtQC68TU3j87nJWZaQHYO9a3rbbPdF3BlW9ZcLSQEc4_xNtXCvcr7t55RYnLObQ0HqTdQeMME0pMgsINGhJUwFd3jTZvZM84FXKyIRiWpKDCqrzROjERuTjqrpnbWjvIDPM0ms5nZrKow2sZx3HZ3zjOnHGdhl5TU872hM5LOtQ4H_Yl8iTkNDoyNPYceSt_8I9yReZ50DjFAdK6Rx2sGoQW_gFl70SS1OrIYpUzbBuO4sN-IM84-6pPEB4JlF1clbBzm-/https%3A%2F%2Fgithub.com%2Fveseshan%2FDNAcopy.git > (push) > upstream mailto:g...@git.bioconductor.org:packages/DNAcopy.git > (fetch) > upstream mailto:g...@git.bioconductor.org:packages/DNAcopy.git > (push) > --------------------------------------------------------- > > And Bioconductor Git Credentials app shows my correct email address > sesh...@mskcc.org > > I don't understand what the issue is. Any help in fixing this will be > greatly appreciated. > > Thanks, > Venkat Seshan > > ===================================================================== > > Please note that this e-mail and any files transmitted from > Memorial Sloan Kettering Cancer Center may be privileged, confidential, > and protected from disclosure under applicable law. If the reader of > this message is not the intended recipient, or an employee or agent > responsible for delivering this message to the intended recipient, > you are hereby notified that any reading, dissemination, distribution, > copying, or other use of this communication or any of its attachments > is strictly prohibited. If you have received this communication in > error, please notify the sender immediately by replying to this message > and deleting this message, any attachments, and all copies and backups > from your computer. > > Disclaimer ID:MSKCC > > _______________________________________________ > Bioc-devel@r-project.org mailing list > > https://secure-web.cisco.com/1OsFHz87Y49nBVO9RGIKUtNzriHIbMjJgtW85FxkMV8SocuxGAlfjxf9V_iJbMO_8_CK4gpaeyAU4iOSvm_pxFllGHZoW8t7agQekHNymJGl2AyIsMJf6mlIGDHSG0Ix3B-t2rS5wwJpgVI6MCrN8dDGOxTC83XN3UoxTA6p6Wgjl79-6VrKkS9QX4hSEr7OJ9w_RV70wGSN8skSXmswbq59wm8yzRll0akjlbeZ7kHX_ElzaMHyN4JuJIIhVzJbO2LBxOw-P4NYq2qCPc2G51uLava6iVOeDel2XwYay6yRRCDZpiBGdpjSYxMs3w3Sz/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel > > > > This email message may contain legally privileged and/or confidential > information. If you are not the intended recipient(s), or the employee or > agent responsible for the delivery of this message to the intended > recipient(s), you are hereby notified that any disclosure, copying, > distribution, or use of this email message is prohibited. If you have > received this message in error, please notify the sender immediately by > e-mail and delete this email message from your computer. Thank you. > [[alternative HTML version deleted]] > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
