openbabel-discuss
Thread
Date
Earlier messages
Later messages
Messages by Date
2014/05/08
Re: [Open Babel] substructure search using molecule as query
Andrew Dalke
2014/05/08
Re: [Open Babel] substructure search using molecule as query
Craig James
2014/05/08
Re: [Open Babel] substructure search using molecule as query
Craig James
2014/05/08
Re: [Open Babel] substructure search using molecule as query
Andrew Dalke
2014/05/08
[Open Babel] substructure search using molecule as query
Andrew Dalke
2014/05/08
Re: [Open Babel] C++ / segfault / "open file" change?
Pascal Muller
2014/05/08
Re: [Open Babel] C++ / segfault / "open file" change?
Noel O'Boyle
2014/05/08
Re: [Open Babel] C++ / segfault / "open file" change?
Pascal Muller
2014/05/08
Re: [Open Babel] Is it possible to change forcefield when using --gen3d?
Fredrik Wallner
2014/05/08
[Open Babel] Is it possible to change forcefield when using --gen3d?
alchemist
2014/05/08
Re: [Open Babel] Output multiple files from OpenBabel in Windows
Pascal Muller
2014/05/07
Re: [Open Babel] Creating an OBMol by hand in C++
David Hall
2014/05/07
[Open Babel] Creating an OBMol by hand in C++
Nicolas Cheron
2014/05/07
Re: [Open Babel] Generating a diverse set of conformers
Douglas Houston
2014/05/07
Re: [Open Babel] Generating a diverse set of conformers
Douglas Houston
2014/05/07
Re: [Open Babel] Generating a diverse set of conformers
Douglas Houston
2014/05/07
Re: [Open Babel] Generating a diverse set of conformers
Douglas Houston
2014/05/07
Re: [Open Babel] Generating a diverse set of conformers
Maciek Wójcikowski
2014/05/07
Re: [Open Babel] Generating a diverse set of conformers
Noel O'Boyle
2014/05/07
Re: [Open Babel] Generating a diverse set of conformers
Douglas Houston
2014/05/07
Re: [Open Babel] Generating a diverse set of conformers
Fredrik Wallner
2014/05/07
Re: [Open Babel] Generating a diverse set of conformers
Douglas Houston
2014/05/07
Re: [Open Babel] Generating a diverse set of conformers
Fredrik Wallner
2014/05/06
Re: [Open Babel] Generating a diverse set of conformers
Noel O'Boyle
2014/05/06
Re: [Open Babel] Generating a diverse set of conformers
Douglas Houston
2014/05/06
Re: [Open Babel] Generating a diverse set of conformers
Douglas Houston
2014/05/06
[Open Babel] Output multiple files from OpenBabel in Windows
error404
2014/05/01
Re: [Open Babel] Get atom force field types
Dimitri Maziuk
2014/05/01
Re: [Open Babel] Get atom force field types
John Doe
2014/05/01
Re: [Open Babel] Get atom force field types
Nicolas Cheron
2014/05/01
[Open Babel] Get atom force field types
John Doe
2014/04/29
Re: [Open Babel] Copy molecule (Python)
Stefano Forli
2014/04/25
[Open Babel] Copy molecule (Python)
ntropia
2014/04/25
[Open Babel] C++ / segfault / "open file" change?
Pascal Muller
2014/04/22
[Open Babel] substructure highlighting via ruby wrapper
Dominic Lütjohann
2014/04/22
Re: [Open Babel] Charges in smarts
Noel O'Boyle
2014/04/18
Re: [Open Babel] Optimization of geometry with the C++ library
Nicolas Cheron
2014/04/18
Re: [Open Babel] Optimization of geometry with the C++ library
Noel O'Boyle
2014/04/18
Re: [Open Babel] How to store fingerprints of mols to make it faster similarity calculation | Python
Noel O'Boyle
2014/04/17
[Open Babel] Optimization of geometry with the C++ library
Nicolas Cheron
2014/04/17
Re: [Open Babel] Couting all substructures
Nicolas Cheron
2014/04/17
Re: [Open Babel] obabel: Converting sdf with multi-line properties
Noel O'Boyle
2014/04/17
Re: [Open Babel] Couting all substructures
Pascal Muller
2014/04/16
[Open Babel] Nonintegral charge sum
Mezei, Mihaly
2014/04/15
Re: [Open Babel] Help to conversion format cif_to_pdb
Wellisson Gonçalves
2014/04/15
[Open Babel] SMARTS charge descriptor
Igor Leontyev
2014/04/15
[Open Babel] Spam holdup
Geoffrey Hutchison
2014/04/15
[Open Babel] Charges in smarts
Igor Leontyev
2014/04/15
[Open Babel] OPENBABEL-2.3.2 compiles, passes all tests but shows no plugins
Hazard, E. Starr
2014/04/15
[Open Babel] Issues with structures from "-p Add hydrogens appropriate for this pH"
davew
2014/04/15
[Open Babel] How to store fingerprints of mols to make it faster similarity calculation | Python
杨弘宾
2014/04/15
[Open Babel] Couting all substructures
Nicolas Cheron
2014/04/15
[Open Babel] How to get PNG support in OpenBabel/Pybel in Centos?
Carolina Román-Salgado
2014/04/15
[Open Babel] Converting xyz file to a SMILES string in C++
Nicolas Cheron
2014/04/15
Re: [Open Babel] Help to conversion format cif_to_pdb
Dimitri Maziuk
2014/04/15
Re: [Open Babel] Help to conversion format cif_to_pdb
Wellisson Gonçalves
2014/04/15
Re: [Open Babel] obabel: Converting sdf with multi-line properties
Jeff Janes
2014/04/15
Re: [Open Babel] Help to conversion format cif_to_pdb
Dimitri Maziuk
2014/04/15
[Open Babel] Issues with structures from "-p Add hydrogens appropriate for this pH"
Dave Wood
2014/04/14
Re: [Open Babel] Help to conversion format cif_to_pdb
David Hall
2014/04/14
[Open Babel] MMFF94 forcefield phenol atom typing
Toby Wright
2014/04/14
Re: [Open Babel] Help to conversion format cif_to_pdb
Wellisson Gonçalves
2014/04/13
Re: [Open Babel] Help to conversion format cif_to_pdb
Dimitri Maziuk
2014/04/12
[Open Babel] Help to conversion format cif_to_pdb
Wellisson Gonçalves
2014/04/12
Re: [Open Babel] Converting xyz file to a SMILES string in C++
Nicolas Cheron
2014/04/12
Re: [Open Babel] How to get PNG support in OpenBabel/Pybel in Centos?
Carolina Román Salgado
2014/04/12
Re: [Open Babel] Converting xyz file to a SMILES string in C++
Noel O'Boyle
2014/04/12
Re: [Open Babel] How to get PNG support in OpenBabel/Pybel in Centos?
Noel O'Boyle
2014/04/11
Re: [Open Babel] How to get PNG support in OpenBabel/Pybel in Centos?
David Hall
2014/04/11
Re: [Open Babel] How to get PNG support in OpenBabel/Pybel in Centos?
Carolina Román Salgado
2014/04/11
[Open Babel] Converting xyz file to a SMILES string in C++
Nicolas Cheron
2014/04/11
[Open Babel] Couting all substructures
Nicolas Cheron
2014/04/11
[Open Babel] Assign UFF atom types to mol2 file
John Doe
2014/04/08
[Open Babel] overlapping atoms of two molecules
prasun kumar
2014/04/02
[Open Babel] Problem with the nomenclature of the atoms of the molecule
prasun kumar
2014/04/02
Re: [Open Babel] How to get PNG support in OpenBabel/Pybel in Centos?
Noel O'Boyle
2014/04/02
[Open Babel] How to get PNG support in OpenBabel/Pybel in Centos?
Carolina Román-Salgado
2014/03/31
Re: [Open Babel] Bond order in canonical SMILES
Tim Vandermeersch
2014/03/31
Re: [Open Babel] Bond order in canonical SMILES
Craig James
2014/03/31
Re: [Open Babel] Bond order in canonical SMILES
Fredrik Wallner
2014/03/31
[Open Babel] Bond order in canonical SMILES
Lee-Ping Wang
2014/03/26
Re: [Open Babel] Make error - Linux 64 bit - GCC 4.6.3 - inchi.dir/all
amcates
2014/03/26
[Open Babel] Make error - Linux 64 bit - GCC 4.6.3 - inchi.dir/all
amcates
2014/03/20
Re: [Open Babel] Conformer searching
Scott McKechnie
2014/03/20
Re: [Open Babel] Conformer searching
Pascal Muller
2014/03/20
Re: [Open Babel] Conformer searching
Scott McKechnie
2014/03/20
Re: [Open Babel] Conformer searching
Igor Filippov
2014/03/20
Re: [Open Babel] Conformer searching
Scott McKechnie
2014/03/20
Re: [Open Babel] Conformer searching
Igor Filippov
2014/03/20
[Open Babel] Conformer searching
scott_m
2014/03/20
Re: [Open Babel] Java API: Can't use OB anymore due to UnsatisfiedLinkError
Joos Kiener
2014/03/19
Re: [Open Babel] Java API: Can't use OB anymore due to UnsatisfiedLinkError
Joos Kiener
2014/03/19
[Open Babel] Java API: Can't use OB anymore due to UnsatisfiedLinkError
Joos Kiener
2014/03/18
Re: [Open Babel] SDF to PDB
Craig James
2014/03/18
Re: [Open Babel] SDF to PDB
Daniel Rodriguez Elvira
2014/03/18
Re: [Open Babel] SDF to PDB
Craig James
2014/03/18
[Open Babel] SDF to PDB
Daniel Rodriguez Elvira
2014/03/17
Re: [Open Babel] Two smi conversion problems
Scott McKechnie
2014/03/17
[Open Babel] Question about Conformer Search
Torsten Sachse
2014/03/15
Re: [Open Babel] openbabel
Geoffrey Hutchison
2014/03/15
Re: [Open Babel] Hi, about install the poltype and python bindings on ubuntu system
Geoffrey Hutchison
2014/03/15
[Open Babel] Hi, about install the poltype and python bindings on ubuntu system
Peng Wang
2014/03/13
Re: [Open Babel] Two smi conversion problems
Geoffrey Hutchison
2014/03/13
Re: [Open Babel] Two smi conversion problems
Scott McKechnie
2014/03/12
Re: [Open Babel] Two smi conversion problems
Geoffrey Hutchison
2014/03/11
[Open Babel] OBDotNet Extension Library
Bruce Fenske
2014/03/10
[Open Babel] Two smi conversion problems
scott_m
2014/03/04
[Open Babel] Helium 0.1 release
Tim Vandermeersch
2014/03/03
Re: [Open Babel] File conversion adds unwanted hydrogens
Tim Vandermeersch
2014/03/01
[Open Babel] File conversion adds unwanted hydrogens
Lee-Ping Wang
2014/02/28
Re: [Open Babel] [OpenBabel-Devel] Multimolecule canonical SMILES
Lee-Ping Wang
2014/02/27
Re: [Open Babel] Open Babel
David Hall
2014/02/27
[Open Babel] Open Babel
Shamal A Mehta
2014/02/26
Re: [Open Babel] Filtering by functional groups question
liubo nashev
2014/02/25
Re: [Open Babel] Filtering by functional groups question
Geoffrey Hutchison
2014/02/25
[Open Babel] Filtering by functional groups question
liubo_nashev
2014/02/24
Re: [Open Babel] obgen and other programs
Geoffrey Hutchison
2014/02/24
Re: [Open Babel] about silk structure..
Geoffrey Hutchison
2014/02/24
Re: [Open Babel] IsHetAtom
Geoffrey Hutchison
2014/02/24
Re: [Open Babel] calculate faradaic efficiency
Bengt
2014/02/23
Re: [Open Babel] calculate faradaic efficiency
Geoffrey Hutchison
2014/02/23
[Open Babel] calculate faradaic efficiency
Bengt
2014/02/22
[Open Babel] about silk structure..
Baki Aksakal
2014/02/19
[Open Babel] IsHetAtom
David Hall
2014/02/18
Re: [Open Babel] [OpenBabel-Devel] Multimolecule canonical SMILES
Lee-Ping Wang
2014/02/17
Re: [Open Babel] [OpenBabel-Devel] Multimolecule canonical SMILES
Tim Vandermeersch
2014/02/17
Re: [Open Babel] User defined 'mask' for data import
C Anthony Lewis
2014/02/17
Re: [Open Babel] [OpenBabel-Devel] Multimolecule canonical SMILES
Tim Vandermeersch
2014/02/17
Re: [Open Babel] [OpenBabel-Devel] Multimolecule canonical SMILES
Geoffrey Hutchison
2014/02/17
Re: [Open Babel] fingerprinting
Geoffrey Hutchison
2014/02/17
Re: [Open Babel] Doubts regarding random rotor search!!
Reinis Danne
2014/02/17
[Open Babel] fingerprinting
Kayleigh Ougham
2014/02/17
[Open Babel] Doubts regarding random rotor search!!
anna
2014/02/16
Re: [Open Babel] Bug
Geoffrey Hutchison
2014/02/16
[Open Babel] Bug
Otto Kohulák
2014/02/14
Re: [Open Babel] [OpenBabel-Devel] Multimolecule canonical SMILES
Craig James
2014/02/14
Re: [Open Babel] Multimolecule canonical SMILES
Geoffrey Hutchison
2014/02/14
Re: [Open Babel] Openbabel build failing on Mac OS
Geoffrey Hutchison
2014/02/12
Re: [Open Babel] Indometacin mol2 -> other format = Segmentation fault
Fredrik Wallner
2014/02/11
[Open Babel] Openbabel build failing on Mac OS 9
S Joshua Swamidass
2014/02/10
Re: [Open Babel] User defined 'mask' for data import
C Anthony Lewis
2014/02/09
Re: [Open Babel] User defined 'mask' for data import
Noel O'Boyle
2014/02/09
Re: [Open Babel] User defined 'mask' for data import
C Anthony Lewis
2014/02/08
Re: [Open Babel] User defined 'mask' for data import
Noel O'Boyle
2014/02/08
[Open Babel] Python .dll ignored when compiling on Mac OS X Maverick
Trevor T
2014/02/08
Re: [Open Babel] Python .dll ignored when compiling on Mac OS X Maverick
Trevor T
2014/02/07
[Open Babel] Indometacin mol2 -> other format = Segmentation fault
Pascal Muller
2014/02/05
Re: [Open Babel] Problem with pybel script starting via PHP on Windows Server 2008 64bit
Jacka
2014/02/05
Re: [Open Babel] Problem with pybel script starting via PHP on Windows Server 2008 64bit
Noel O'Boyle
2014/02/05
Re: [Open Babel] Problem with pybel script starting via PHP on Windows Server 2008 64bit
Noel O'Boyle
2014/02/05
[Open Babel] Problem with pybel script starting via PHP on Windows Server 2008 64bit
Jacka
2014/02/04
Re: [Open Babel] running Open Babel in parallel / distributed mode
Francois Berenger
2014/02/04
Re: [Open Babel] running Open Babel in parallel / distributed mode
David Hall
2014/02/04
[Open Babel] Multimolecule canonical SMILES
Lee-Ping Wang
2014/02/04
Re: [Open Babel] running Open Babel in parallel / distributed mode
Maciek Wójcikowski
2014/02/04
Re: [Open Babel] running Open Babel in parallel / distributed mode
Francois Berenger
2014/02/04
Re: [Open Babel] running Open Babel in parallel / distributed mode
Noel O'Boyle
2014/02/03
Re: [Open Babel] running Open Babel in parallel / distributed mode
Francois Berenger
2014/02/03
Re: [Open Babel] running Open Babel in parallel / distributed mode
Igor Filippov
2014/02/03
Re: [Open Babel] running Open Babel in parallel / distributed mode
Maciek Wójcikowski
2014/02/03
Re: [Open Babel] make uninstall target
David Hall
2014/02/03
Re: [Open Babel] make uninstall target
Noel O'Boyle
2014/02/02
[Open Babel] running Open Babel in parallel / distributed mode
Francois Berenger
2014/02/02
Re: [Open Babel] Tversky_ref and Tversky_db
Geoffrey Hutchison
2014/02/02
[Open Babel] make uninstall target
Francois Berenger
2014/02/02
[Open Babel] pytest_kekule (Failed)
Francois Berenger
2014/02/02
[Open Babel] Tversky_ref and Tversky_db
Francois Berenger
2014/01/30
Re: [Open Babel] Are the pqr lines created by Open Babel in fixed format?
Francois Berenger
2014/01/30
Re: [Open Babel] Are the pqr lines created by Open Babel in fixed format?
Geoffrey Hutchison
2014/01/30
Re: [Open Babel] Are the pqr lines created by Open Babel in fixed format?
Igor Filippov
2014/01/30
Re: [Open Babel] Are the pqr lines created by Open Babel in fixed format?
Geoffrey Hutchison
2014/01/30
Re: [Open Babel] large-scale similarity search
Björn Grüning
2014/01/30
Re: [Open Babel] large-scale similarity search
Noel O'Boyle
2014/01/30
[Open Babel] large-scale similarity search
Jörg Kurt Wegner
2014/01/29
[Open Babel] Are the pqr lines created by Open Babel in fixed format?
Francois Berenger
2014/01/28
[Open Babel] can i delete solvent by open babel?
unwicky
2014/01/26
Re: [Open Babel] OBReaction in ruby bindings
Noel O'Boyle
2014/01/22
Re: [Open Babel] PyCharm integration
Noel O'Boyle
2014/01/19
[Open Babel] PyCharm integration
Ernest Murray
2014/01/17
[Open Babel] OBReaction in ruby bindings
Dominic Lütjohann
2014/01/15
Re: [Open Babel] missing obabel executable when compiling by sources on HPC
Vedat Durmaz
2014/01/15
Re: [Open Babel] missing obabel executable when compiling by sources on HPC
Maciek Wójcikowski
2014/01/15
Re: [Open Babel] missing obabel executable when compiling by sources on HPC
Vedat Durmaz
2014/01/14
Re: [Open Babel] missing obabel executable when compiling by sources on HPC
Dimitri Maziuk
2014/01/14
Re: [Open Babel] missing obabel executable when compiling by sources on HPC
Vedat Durmaz
2014/01/14
Re: [Open Babel] missing obabel executable when compiling by sources on HPC
Geoffrey Hutchison
2014/01/14
Re: [Open Babel] Converting CIFs to mols using OpenBabel
Miguel Quirós Olozábal
2014/01/14
Re: [Open Babel] missing obabel executable when compiling by sources on HPC
Vedat Durmaz
2014/01/13
Re: [Open Babel] Pybel on Python3 + Mavericks
Geoffrey Hutchison
2014/01/13
Re: [Open Babel] Pybel on Python3 + Mavericks
Matt Swain
2014/01/13
Re: [Open Babel] Pybel on Python3 + Mavericks
Noel O'Boyle
2014/01/13
Re: [Open Babel] missing obabel executable when compiling by sources on HPC
Noel O'Boyle
2014/01/13
[Open Babel] Canonicalize and retain pseudo charges/bonds?
Rudesh.AZ
2014/01/13
[Open Babel] missing obabel executable when compiling by sources on HPC
Vedat Durmaz
2014/01/13
Re: [Open Babel] wrong RMSD with symmetry
Igor Leontyev
2014/01/13
Re: [Open Babel] Pybel on Python3 + Mavericks
Matt Swain
2014/01/09
Re: [Open Babel] How to use openbabel_java library on linux
David Hall
2014/01/09
[Open Babel] How to use openbabel_java library on linux
강경태
2014/01/09
Re: [Open Babel] wrong RMSD with symmetry
Noel O'Boyle
2014/01/08
Re: [Open Babel] wrong RMSD with symmetry
Noel O'Boyle
Earlier messages
Later messages