[Open Babel] OPENBABEL-2.3.2 compiles, passes all tests but shows no plugins

Hazard, E. Starr Tue, 15 Apr 2014 18:40:26 -0700

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.


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57/57 Test #57: pytest_kekule ....................   Passed    0.66 sec


100% tests passed, 0 tests failed out of 57


Total Test time (real) =  55.10 sec


Yet after “make install”


obabel -L

Ops


Why can’t my install find more of  its plugins?


obabel -L mol2

mol2 is not a recognized plugin type. Those with instances of sub-types loaded 
are:

Ops


Here’s the content of install_manifest.txt



Cat install_manifest.txt

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/babelconfig.h

/shared/app/OPENBABEL/lib/pkgconfig/openbabel-2.0.pc

/shared/app/OPENBABEL/lib/cmake/openbabel2/OpenBabel2_EXPORTS.cmake

/shared/app/OPENBABEL/lib/cmake/openbabel2/OpenBabel2_EXPORTS-relwithdebinfo.cmake

/shared/app/OPENBABEL/lib/cmake/openbabel2/OpenBabel2Config.cmake

/shared/app/OPENBABEL/lib/cmake/openbabel2/OpenBabel2ConfigVersion.cmake

/shared/app/OPENBABEL/include/inchi/inchi_api.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/chemdrawcdx.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/alias.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/atom.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/atomclass.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/base.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/bitvec.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/bond.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/bondtyper.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/builder.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/canon.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/chains.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/chargemodel.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/chiral.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/conformersearch.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/data.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/descriptor.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/dlhandler.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/fingerprint.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/forcefield.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/format.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/generic.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/graphsym.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/grid.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/griddata.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/groupcontrib.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/inchiformat.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/internalcoord.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/isomorphism.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/kinetics.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/lineend.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/locale.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/matrix.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/mcdlutil.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/mol.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/molchrg.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/obconversion.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/oberror.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/obiter.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/obmolecformat.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/obutil.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/op.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/optransform.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/parsmart.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/patty.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/phmodel.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/plugin.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/pointgroup.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/query.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/rand.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/reaction.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/residue.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/ring.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/rotamer.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/rotor.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/shared_ptr.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/spectrophore.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/text.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/tokenst.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/typer.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/xml.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/math/align.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/math/erf.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/math/matrix3x3.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/math/spacegroup.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/math/transform3d.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/math/vector3.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/stereo/bindings.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/stereo/cistrans.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/stereo/squareplanar.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/stereo/stereo.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/stereo/tetrahedral.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/stereo/tetranonplanar.h

/shared/app/OPENBABEL/include/openbabel-2.0/openbabel/stereo/tetraplanar.h

/shared/app/OPENBABEL/share/openbabel/2.3.2/aromatic.txt

/shared/app/OPENBABEL/share/openbabel/2.3.2/atomtyp.txt

/shared/app/OPENBABEL/share/openbabel/2.3.2/babel_povray3.inc

/shared/app/OPENBABEL/share/openbabel/2.3.2/bondtyp.txt

/shared/app/OPENBABEL/share/openbabel/2.3.2/element.txt

/shared/app/OPENBABEL/share/openbabel/2.3.2/fragments.txt

/shared/app/OPENBABEL/share/openbabel/2.3.2/gaff.dat

/shared/app/OPENBABEL/share/openbabel/2.3.2/gaff.prm

/shared/app/OPENBABEL/share/openbabel/2.3.2/ghemical.prm

/shared/app/OPENBABEL/share/openbabel/2.3.2/isotope-small.txt

/shared/app/OPENBABEL/share/openbabel/2.3.2/isotope.txt

/shared/app/OPENBABEL/share/openbabel/2.3.2/logp.txt

/shared/app/OPENBABEL/share/openbabel/2.3.2/MACCS.txt

/shared/app/OPENBABEL/share/openbabel/2.3.2/mmff94.ff

/shared/app/OPENBABEL/share/openbabel/2.3.2/mmff94s.ff

/shared/app/OPENBABEL/share/openbabel/2.3.2/mmffang.par

/shared/app/OPENBABEL/share/openbabel/2.3.2/mmffbndk.par

/shared/app/OPENBABEL/share/openbabel/2.3.2/mmffbond.par

/shared/app/OPENBABEL/share/openbabel/2.3.2/mmffchg.par

/shared/app/OPENBABEL/share/openbabel/2.3.2/mmffdef.par

/shared/app/OPENBABEL/share/openbabel/2.3.2/mmffdfsb.par

/shared/app/OPENBABEL/share/openbabel/2.3.2/mmffoop.par

/shared/app/OPENBABEL/share/openbabel/2.3.2/mmffpbci.par

/shared/app/OPENBABEL/share/openbabel/2.3.2/mmffprop.par

/shared/app/OPENBABEL/share/openbabel/2.3.2/mmffstbn.par

/shared/app/OPENBABEL/share/openbabel/2.3.2/mmfftor.par

/shared/app/OPENBABEL/share/openbabel/2.3.2/mmffvdw.par

/shared/app/OPENBABEL/share/openbabel/2.3.2/mmffs_oop.par

/shared/app/OPENBABEL/share/openbabel/2.3.2/mmffs_tor.par

/shared/app/OPENBABEL/share/openbabel/2.3.2/mr.txt

/shared/app/OPENBABEL/share/openbabel/2.3.2/patterns.txt

/shared/app/OPENBABEL/share/openbabel/2.3.2/phmodel.txt

/shared/app/OPENBABEL/share/openbabel/2.3.2/plugindefines.txt

/shared/app/OPENBABEL/share/openbabel/2.3.2/psa.txt

/shared/app/OPENBABEL/share/openbabel/2.3.2/qeq.txt

/shared/app/OPENBABEL/share/openbabel/2.3.2/resdata.txt

/shared/app/OPENBABEL/share/openbabel/2.3.2/ringtyp.txt

/shared/app/OPENBABEL/share/openbabel/2.3.2/SMARTS_InteLigand.txt

/shared/app/OPENBABEL/share/openbabel/2.3.2/space-groups.txt

/shared/app/OPENBABEL/share/openbabel/2.3.2/superatom.txt

/shared/app/OPENBABEL/share/openbabel/2.3.2/svgformat.script

/shared/app/OPENBABEL/share/openbabel/2.3.2/torlib.txt

/shared/app/OPENBABEL/share/openbabel/2.3.2/types.txt

/shared/app/OPENBABEL/share/openbabel/2.3.2/UFF.prm

/shared/app/OPENBABEL/share/man/man1/babel.1

/shared/app/OPENBABEL/share/man/man1/obabel.1

/shared/app/OPENBABEL/share/man/man1/obchiral.1

/shared/app/OPENBABEL/share/man/man1/obconformer.1

/shared/app/OPENBABEL/share/man/man1/obenergy.1

/shared/app/OPENBABEL/share/man/man1/obfit.1

/shared/app/OPENBABEL/share/man/man1/obgen.1

/shared/app/OPENBABEL/share/man/man1/obgrep.1

/shared/app/OPENBABEL/share/man/man1/obgui.1

/shared/app/OPENBABEL/share/man/man1/obminimize.1

/shared/app/OPENBABEL/share/man/man1/obprobe.1

/shared/app/OPENBABEL/share/man/man1/obprop.1

/shared/app/OPENBABEL/share/man/man1/obrotamer.1

/shared/app/OPENBABEL/share/man/man1/obrotate.1

/shared/app/OPENBABEL/share/man/man1/obspectrophore.1

/shared/app/OPENBABEL/share/man/man1/roundtrip.1

/shared/app/OPENBABEL/share/openbabel/2.3.2/splash.png

/shared/app/OPENBABEL/lib/libopenbabel.so.4.0.2

/shared/app/OPENBABEL/lib/libopenbabel.so.4

/shared/app/OPENBABEL/lib/libopenbabel.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/plugin_descriptors.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/plugin_fingerprints.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/plugin_forcefields.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/plugin_ops.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/plugin_charges.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/smilesformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/mdlformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/mol2format.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/pdbformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/inchiformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/asciiformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/copyformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/MNAformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/molreport.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/nulformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/povrayformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/reportformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/svgformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/textformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/titleformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/pngformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/acesformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/abinitformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/adfformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/castepformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/crystal09format.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/dmolformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/fchkformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/fhiaimsformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/gamessformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/gaussformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/gausscubeformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/gausszmatformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/gulpformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/hinformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/jaguarformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/molproformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/mopacformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/nwchemformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/pwscfformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/qchemformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/turbomoleformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/vaspformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/xsfformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/zindoformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/gamessukformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/APIInterface.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/CSRformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/PQSformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/MCDLformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/alchemyformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/acrformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/amberformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/balstformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/bgfformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/boxformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/cacaoformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/cacheformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/carformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/cccformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/chem3dformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/chemdrawct.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/chemtoolformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/cifformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/crkformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/cssrformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/dlpolyformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/fastsearchformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/fastaformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/featformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/fhformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/fingerprintformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/fpsformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/freefracformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/ghemicalformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/gromos96format.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/groformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/lmpdatformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/mmcifformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/mmodformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/moldenformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/mpdformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/mpqcformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/msiformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/msmsformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/opendxformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/outformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/pcmodelformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/pdbqtformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/posformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/pqrformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/shelxformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/thermoformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/tinkerformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/unichemformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/viewmolformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/xedformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/xyzformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/yasaraformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/rxnformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/chemdrawcdx.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/chemkinformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/rsmiformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/xtcformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/png2format.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/cdxmlformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/cmlformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/pubchem.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/xmlformat.so

/shared/app/OPENBABEL/lib/openbabel/2.3.2/cmlreactformat.so

/shared/app/OPENBABEL/lib/libinchi.so.0.4.1

/shared/app/OPENBABEL/lib/libinchi.so.0

/shared/app/OPENBABEL/lib/libinchi.so

/shared/app/OPENBABEL/bin/babel

/shared/app/OPENBABEL/bin/obabel

/shared/app/OPENBABEL/bin/obchiral

/shared/app/OPENBABEL/bin/obconformer

/shared/app/OPENBABEL/bin/obenergy

/shared/app/OPENBABEL/bin/obfit

/shared/app/OPENBABEL/bin/obgen

/shared/app/OPENBABEL/bin/obminimize

/shared/app/OPENBABEL/bin/obprobe

/shared/app/OPENBABEL/bin/obprop

/shared/app/OPENBABEL/bin/obrotamer

/shared/app/OPENBABEL/bin/obrotate

/shared/app/OPENBABEL/bin/obrms

/shared/app/OPENBABEL/bin/obspectrophore

/shared/app/OPENBABEL/bin/obgrep

/shared/app/OPENBABEL/bin/roundtrip

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[Open Babel] OPENBABEL-2.3.2 compiles, passes all tests but shows no plugins

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