Hi Bruce, Thank you for your replies. Cheers On Tue, Sep 5, 2017 at 4:52 AM Bruce Fischl <fis...@nmr.mgh.harvard.edu> wrote:
> Hi Fereshte > > the algorithm is documented in the recon1 1999 NeuroImage and 2000 PNAS > papers > > cheers > Bruce > On Mon, 4 Sep 2017, Fereshte wrote: > > > What's the algorithm used to expand inner cortical boundary ( to achieve > the outer cortical boundary > > in pial surface) in FreeSurfer? > > On Mon, Sep 4, 2017 at 9:58 PM Bruce Fischl <fis...@nmr.mgh.harvard.edu> > wrote: > > it will give the interior volume of whatever surface you give it > as a > > command line argument. > > > > On Mon, 4 Sep 2017, Fereshte > > wrote: > > > > > Using the Pial surface; Does it mean mris_volume will give the > inner cortical boundary > > of the > > > surface and not the outer boundary? > > > Sincerely, > > > Fereshte Ramezani > > > On Mon, Sep 4, 2017 at 9:53 PM Fereshte < > fereshte.ramez...@gmail.com> wrote: > > > > > > On Mon, Sep 4, 2017 at 6:46 PM Bruce Fischl < > fis...@nmr.mgh.harvard.edu> wrote: > > > sure, mris_volume will give you the interior volume of any > closed surface > > > using the divergence formula. Note that this is *not* the > volume of the > > > ribbon but rather the volume of the entire interior > > > > > > cheers > > > Bruce > > > > > > > > > On Mon, 4 Sep 2017, Fereshte wrote: > > > > > > > Hello FreeSurfer developersIs it possible to have the > volume of pial surface > > in > > > FreeSurfer? > > > > > > > >_______________________________________________ > > > Freesurfer mailing list > > > Freesurfer@nmr.mgh.harvard.edu > > > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > > > > > > The information in this e-mail is intended only for the > person to whom it is > > > addressed. If you believe this e-mail was sent to you in > error and the e-mail > > > contains patient information, please contact the Partners > Compliance HelpLine at > > > http://www.partners.org/complianceline . If the e-mail > was sent to you in error > > > but does not contain patient information, please contact > the sender and properly > > > dispose of the e-mail. > > > > > > > > >_______________________________________________ > > Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > > > The information in this e-mail is intended only for the person to > whom it is > > addressed. If you believe this e-mail was sent to you in error and > the e-mail > > contains patient information, please contact the Partners > Compliance HelpLine at > > http://www.partners.org/complianceline . If the e-mail was sent > to you in error > > but does not contain patient information, please contact the > sender and properly > > dispose of the e-mail. > > > > > >_______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. >
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