Hei

Dette er  en tekstfil i web diskusjonsforum. Det er mange som bruker 
Freesurfer. Teksten dreier seg om ny lisensfil i samband med en ny versjon. Det 
aktuelle mailen angår ikke meg. Jeg bruker gammel Freesurfer på jobben som ikke 
trenger ny lisensfil.

Hilsen

Pål

Dr. philos. Pål G. Larsson
Seksjonsleder Klinisk nevrofysiologi
Nevrokirurgisk avdeling
Oslo Universitetssykehus
Postboks 4950 Nydalen
0424 Oslo

Tlf.:  23074407
Mobil: 93429791

E-mail: p...@ous-hf.no<mailto:pal.gunnar.lars...@ous-hf.no>

Denne meldingen innholder ikke sensitiv informasjon som bryter med Ous sine 
regler for taushetsplikt

Fra: freesurfer-boun...@nmr.mgh.harvard.edu 
[mailto:freesurfer-boun...@nmr.mgh.harvard.edu] På vegne av Taylor Hilton
Sendt: 8. februar 2017 15:45
Til: Freesurfer support list
Emne: Re: [Freesurfer] recon-all issue {Disarmed}

Apologies, that was an old log, attaching the relevant one here.



On Feb 7, 2017, at 6:02 PM, Douglas Greve 
<gr...@nmr.mgh.harvard.edu<mailto:gr...@nmr.mgh.harvard.edu>> wrote:

According to the log file, the error is that you need a new license:
GNU libc version: 2.23
ERROR: Systems running GNU glibc version greater than 2.15
require a newly formatted license file (it's free). Please
download a new one from the following page:
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On 2/7/17 12:49 PM, Taylor Hilton wrote:
Yes I’ll attach it here.  I’m using a linux server(Ubuntu).




On Feb 7, 2017, at 12:32 PM, Douglas Greve 
<gr...@nmr.mgh.harvard.edu<mailto:gr...@nmr.mgh.harvard.edu>> wrote:

Can you send the full recon-all.log? What platform are you running on?

On 2/7/17 11:19 AM, Taylor Hilton wrote:
Hi all,

Having trouble with an error running "recon-all -subjid ${i} -autorecon2” 
across all subjects.

Below is where it has the error in recon-all.log.  We also tried running the 
last command (“ln -s …”) manually and got the error “ln: failed to 
create symbolic link ‘lh.white.H’: Operation not supported.” whereas the 
rest of the commands ran normally.

#--------------------------------------------
#@# Curv .H and .K lh Tue Feb  7 07:29:43 EST 2017
/home/jamielh/Volumes/Hanson/Pardini_Projects/K_award/10007/surf

 mris_curvature -w lh.white.preaparc

total integrated curvature = 18.936*4pi (237.960) --> -18 handles
ICI = 230.2, FI = 1697.2, variation=29040.790
writing Gaussian curvature to ./lh.white.preaparc.K...done.
writing mean curvature to ./lh.white.preaparc.H...done.
rm -f lh.white.H
ln -s lh.white.preaparc.H lh.white.H
Linux pfc 4.4.0-59-generic #80-Ubuntu SMP Fri Jan 6 17:47:47 UTC 2017 x86_64 
x86_64 x86_64 GNU/Linux

recon-all -s 10007 exited with ERRORS at Tue Feb  7 07:29:46 EST 2017

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————————————————————————————————————————————————


We also tried the solution laid out in this thread with no luck:
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Any help is very appreciated!

- B. Taylor Hilton
Lab Data Coordinator, University of Pittsburgh







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