Any thoughts on why this file turned out this way?

Thanks!
Emily

On Jun 26, 2013, at 8:09 AM, Emily Boeke wrote:

> Sure, here it is:
> 
> # Cluster Growing Summary (mri_volcluster)
> # $Id: mri_volcluster.c,v 1.38.2.3 2009/01/16 02:26:36 greve Exp $
> # cwd 
> /autofs/cluster/maury/users/gcoombs/College_Risk/ObjectLooming/allSBQ_061213/st4-obj_ns-4runs/face_v_car
> # cmdline mri_volcluster --in tal.sm.wls.pct.rfx//group/sig.mgh --csd 
> tal.sm.wls.pct.rfx//csd/HvL.SBQ.2.pos.j001-group.csd --mask 
> tal.sm.wls.pct.rfx//mask.mgh --cwsig 
> tal.sm.wls.pct.rfx//group/HvL.SBQ.2.pos.sig.cluster.mgh --vwsig 
> tal.sm.wls.pct.rfx//group/HvL.SBQ.2.pos.sig.voxel.mgh --sum 
> tal.sm.wls.pct.rfx//group/HvL.SBQ.2.pos.sig.cluster.summary --ocn 
> tal.sm.wls.pct.rfx//group/HvL.SBQ.2.pos.sig.ocn.mgh --csdpdf 
> tal.sm.wls.pct.rfx//group/HvL.SBQ.2.pos.pdf.dat 
> # sysname  Linux
> # hostname compute-0-114
> # machine  x86_64
> # user     eboeke01
> # Input Volume:      tal.sm.wls.pct.rfx//group/sig.mgh
> # Frame Number:      0
> # Minimum Threshold: 2
> # Maximum Threshold: inifinity
> # Threshold Sign:    pos
> # AdjustThreshWhenOneTail 1
> # Size Threshold:    0 mm^3
> # Size Threshold:    0 voxels
> # Voxel Size:        8 mm^3
> # Registration:      None : Tal Coords invalid
> # Mask Vol:          tal.sm.wls.pct.rfx//mask.mgh
> # Mask Thresh:       0.500000
> # Mask Sign:         abs
> # Mask Invert:       0
> # AllowDiag:         0
> # NClusters          192
> # CSD thresh  2.000000
> # CSD nreps    10000
> # CSD simtype  mc-z
> # CSD contrast group
> # CSD confint  90.000000
> # 
> # Reporting Coordinates in Voxel Indices
> # Cluster   Size(n)   Size(mm^3)       VoxX   VoxY    VoxZ              Max#  
>   CWP    CWPLow    CWPHi
>   1         597       4776.0      30.00   50.00   65.00           5.94673  
> 0.02490  0.02290  0.02690
>   2         730       5840.0      27.00   28.00   86.00           5.56628  
> 0.00720  0.00610  0.00830
>   3        1124       8992.0       5.00   18.00   38.00           5.01850  
> 0.00010  0.00000  0.00020
>   4         259       2072.0      59.00   20.00   78.00           5.01465  
> 0.68360  0.67760  0.68960
>   5         279       2232.0      18.00   22.00   73.00           3.94952  
> 0.58840  0.58210  0.59470
>   6         194       1552.0      35.00   66.00   76.00           3.94297  
> 0.93630  0.93320  0.93940
>   7         664       5312.0      32.00   15.00   60.00           3.68551  
> 0.01400  0.01250  0.01550
>   8         293       2344.0      28.00    5.00   58.00           3.66686  
> 0.52560  0.51920  0.53200
>   9          49        392.0      12.00   52.00   58.00           3.63351  
> 1.00000  -0.00010  1.00000
>  10         150       1200.0       5.00    4.00   28.00           3.62637  
> 0.99560  0.99470  0.99640
>  11         298       2384.0      12.00   47.00   86.00           3.58250  
> 0.50260  0.49620  0.50900
>  12         343       2744.0      13.00   39.00   60.00           3.57829  
> 0.33900  0.33290  0.34510
>  13         467       3736.0      21.00   42.00   49.00           3.53307  
> 0.09590  0.09210  0.09970
>  14         276       2208.0      49.00   36.00   56.00           3.51549  
> 0.60280  0.59650  0.60910
>  15         134       1072.0      70.00   17.00   34.00           3.38623  
> 0.99890  0.99850  0.99930
>  16          75        600.0       5.00   25.00   55.00           3.09334  
> 1.00000  -0.00010  1.00000
>  17          74        592.0      13.00   10.00   49.00           3.03017  
> 1.00000  -0.00010  1.00000
>  18          45        360.0      65.00   39.00   62.00           3.00205  
> 1.00000  -0.00010  1.00000
>  19          15        120.0      72.00    7.00   42.00           2.96283  
> 1.00000  -0.00010  1.00000
>  20          55        440.0      62.00    9.00   23.00           2.93121  
> 1.00000  -0.00010  1.00000
>  21          79        632.0      46.00   60.00   87.00           2.92199  
> 1.00000  -0.00010  1.00000
>  22          35        280.0       2.00   41.00   48.00           2.84065  
> 1.00000  -0.00010  1.00000
>  23          44        352.0       6.00   35.00   27.00           2.80109  
> 1.00000  -0.00010  1.00000
>  24          14        112.0      50.00    3.00   54.00           2.75399  
> 1.00000  -0.00010  1.00000
>  25          71        568.0       0.00   22.00    9.00           2.75160  
> 1.00000  -0.00010  1.00000
>  26           5         40.0      28.00    0.00   36.00           2.72535  
> 1.00000  -0.00010  1.00000
>  27         130       1040.0      40.00    1.00   45.00           2.71826  
> 0.99920  0.99880  0.99950
>  28          81        648.0      33.00   61.00   86.00           2.70040  
> 1.00000  -0.00010  1.00000
>  29          73        584.0      67.00   26.00   52.00           2.68744  
> 1.00000  -0.00010  1.00000
>  30          16        128.0      64.00   48.00   72.00           2.67636  
> 1.00000  -0.00010  1.00000
>  31          28        224.0      75.00   35.00   88.00           2.65193  
> 1.00000  -0.00010  1.00000
>  32          11         88.0      15.00   21.00   82.00           2.61771  
> 1.00000  -0.00010  1.00000
>  33           5         40.0      45.00    0.00   27.00           2.61424  
> 1.00000  -0.00010  1.00000
>  34          16        128.0       9.00   13.00   70.00           2.58842  
> 1.00000  -0.00010  1.00000
>  35          23        184.0      15.00   27.00   48.00           2.57410  
> 1.00000  -0.00010  1.00000
>  36          28        224.0      15.00   31.00   44.00           2.57219  
> 1.00000  -0.00010  1.00000
>  37          23        184.0      29.00   56.00   78.00           2.55890  
> 1.00000  -0.00010  1.00000
>  38           7         56.0       0.00   42.00   92.00           2.55525  
> 1.00000  -0.00010  1.00000
>  39          49        392.0      52.00   40.00   88.00           2.54894  
> 1.00000  -0.00010  1.00000
>  40          42        336.0       7.00   31.00   63.00           2.52160  
> 1.00000  -0.00010  1.00000
>  41          37        296.0      22.00   43.00   81.00           2.50557  
> 1.00000  -0.00010  1.00000
>  42          21        168.0      22.00   58.00   72.00           2.49912  
> 1.00000  -0.00010  1.00000
>  43          32        256.0      59.00   45.00   91.00           2.44918  
> 1.00000  -0.00010  1.00000
>  44          12         96.0      31.00   29.00   36.00           2.42939  
> 1.00000  -0.00010  1.00000
>  45          50        400.0      14.00   34.00   26.00           2.42102  
> 1.00000  -0.00010  1.00000
>  46          22        176.0       6.00   15.00   55.00           2.41349  
> 1.00000  -0.00010  1.00000
>  47          12         96.0       9.00   43.00   42.00           2.40593  
> 1.00000  -0.00010  1.00000
>  48          27        216.0      64.00   17.00   31.00           2.38351  
> 1.00000  -0.00010  1.00000
>  49          16        128.0      25.00   49.00   81.00           2.37500  
> 1.00000  -0.00010  1.00000
>  50          37        296.0      12.00   18.00   54.00           2.36836  
> 1.00000  -0.00010  1.00000
>  51          22        176.0      43.00   50.00   63.00           2.35072  
> 1.00000  -0.00010  1.00000
>  52          39        312.0      31.00   39.00   46.00           2.31633  
> 1.00000  -0.00010  1.00000
>  53           7         56.0      75.00   60.00   84.00           2.28945  
> 1.00000  -0.00010  1.00000
>  54           6         48.0      33.00   25.00   67.00           2.28154  
> 1.00000  -0.00010  1.00000
>  55          10         80.0      49.00   40.00   33.00           2.27301  
> 1.00000  -0.00010  1.00000
>  56          13        104.0      26.00   65.00   88.00           2.27017  
> 1.00000  -0.00010  1.00000
>  57           6         48.0      13.00   25.00   26.00           2.26583  
> 1.00000  -0.00010  1.00000
>  58          15        120.0      54.00    9.00   20.00           2.25868  
> 1.00000  -0.00010  1.00000
>  59          16        128.0      63.00   14.00   19.00           2.21490  
> 1.00000  -0.00010  1.00000
>  60           4         32.0       9.00   25.00   61.00           2.21056  
> 1.00000  -0.00010  1.00000
>  61          37        296.0      25.00   37.00   62.00           2.21055  
> 1.00000  -0.00010  1.00000
>  62          10         80.0      59.00   51.00   51.00           2.20982  
> 1.00000  -0.00010  1.00000
>  63          20        160.0      66.00   41.00   51.00           2.19863  
> 1.00000  -0.00010  1.00000
>  64           2         16.0      53.00   66.00   72.00           2.18410  
> 1.00000  -0.00010  1.00000
>  65           9         72.0      37.00   38.00   66.00           2.17739  
> 1.00000  -0.00010  1.00000
>  66           6         48.0       6.00   44.00   62.00           2.17461  
> 1.00000  -0.00010  1.00000
>  67          39        312.0      50.00   35.00   70.00           2.16322  
> 1.00000  -0.00010  1.00000
>  68          11         88.0      52.00    6.00   21.00           2.16002  
> 1.00000  -0.00010  1.00000
>  69           6         48.0      26.00    0.00   43.00           2.15030  
> 1.00000  -0.00010  1.00000
>  70           8         64.0      41.00   16.00   19.00           2.14875  
> 1.00000  -0.00010  1.00000
>  71           4         32.0      51.00    8.00   39.00           2.14592  
> 1.00000  -0.00010  1.00000
>  72           3         24.0      47.00    9.00   21.00           2.14285  
> 1.00000  -0.00010  1.00000
>  73           8         64.0      67.00   19.00   27.00           2.14034  
> 1.00000  -0.00010  1.00000
>  74          12         96.0       3.00   59.00   86.00           2.13879  
> 1.00000  -0.00010  1.00000
>  75           3         24.0      15.00    6.00   19.00           2.13024  
> 1.00000  -0.00010  1.00000
>  76           9         72.0      59.00   41.00   41.00           2.12204  
> 1.00000  -0.00010  1.00000
>  77          18        144.0      35.00   48.00   55.00           2.10334  
> 1.00000  -0.00010  1.00000
>  78           6         48.0      40.00   57.00   92.00           2.08841  
> 1.00000  -0.00010  1.00000
>  79           7         56.0      43.00    1.00   17.00           2.07371  
> 1.00000  -0.00010  1.00000
>  80           6         48.0      41.00   55.00   69.00           2.07007  
> 1.00000  -0.00010  1.00000
>  81          14        112.0      23.00   35.00   88.00           2.06307  
> 1.00000  -0.00010  1.00000
>  82          11         88.0      40.00   73.00   82.00           2.05213  
> 1.00000  -0.00010  1.00000
>  83           5         40.0      39.00   19.00   51.00           2.04809  
> 1.00000  -0.00010  1.00000
>  84          10         80.0      38.00   24.00   69.00           2.04252  
> 1.00000  -0.00010  1.00000
>  85           9         72.0      30.00   32.00   67.00           2.04237  
> 1.00000  -0.00010  1.00000
>  86           7         56.0      54.00   58.00   72.00           2.03645  
> 1.00000  -0.00010  1.00000
>  87          10         80.0      30.00   13.00   22.00           2.03577  
> 1.00000  -0.00010  1.00000
>  88           8         64.0       0.00   25.00   72.00           2.03193  
> 1.00000  -0.00010  1.00000
>  89           5         40.0       7.00   23.00    6.00           2.02805  
> 1.00000  -0.00010  1.00000
>  90           4         32.0      59.00   28.00   21.00           2.02245  
> 1.00000  -0.00010  1.00000
>  91          11         88.0      43.00   18.00   63.00           2.01764  
> 1.00000  -0.00010  1.00000
>  92           5         40.0      14.00   41.00   87.00           2.01255  
> 1.00000  -0.00010  1.00000
>  93           3         24.0      28.00   50.00   55.00           2.01226  
> 1.00000  -0.00010  1.00000
>  94           6         48.0      35.00    0.00   43.00           1.99869  
> 1.00000  -0.00010  1.00000
>  95           1          8.0      59.00   57.00   79.00           1.99505  
> 1.00000  -0.00010  1.00000
>  96           1          8.0      25.00    2.00   51.00           1.99394  
> 1.00000  -0.00010  1.00000
>  97           4         32.0      55.00    4.00   36.00           1.98505  
> 1.00000  -0.00010  1.00000
>  98           2         16.0      66.00   21.00    6.00           1.97461  
> 1.00000  -0.00010  1.00000
>  99           3         24.0      31.00   51.00   90.00           1.97154  
> 1.00000  -0.00010  1.00000
> 100           3         24.0      12.00   11.00   23.00           1.95664  
> 1.00000  -0.00010  1.00000
> 101           5         40.0      38.00   43.00   50.00           1.95222  
> 1.00000  -0.00010  1.00000
> 102           2         16.0      28.00   22.00    7.00           1.95066  
> 1.00000  -0.00010  1.00000
> 103           4         32.0      20.00   17.00   69.00           1.94669  
> 1.00000  -0.00010  1.00000
> 104           5         40.0       1.00    8.00   46.00           1.94587  
> 1.00000  -0.00010  1.00000
> 105           4         32.0      42.00   15.00   49.00           1.94354  
> 1.00000  -0.00010  1.00000
> 106           4         32.0       4.00   41.00   54.00           1.93906  
> 1.00000  -0.00010  1.00000
> 107           3         24.0      15.00    9.00   33.00           1.93848  
> 1.00000  -0.00010  1.00000
> 108           6         48.0      61.00   28.00   72.00           1.92516  
> 1.00000  -0.00010  1.00000
> 109           1          8.0      49.00   26.00   88.00           1.92457  
> 1.00000  -0.00010  1.00000
> 110           3         24.0      65.00   37.00   41.00           1.92365  
> 1.00000  -0.00010  1.00000
> 111           3         24.0      69.00   29.00   25.00           1.91576  
> 1.00000  -0.00010  1.00000
> 112           2         16.0      70.00   15.00    9.00           1.89931  
> 1.00000  -0.00010  1.00000
> 113           2         16.0      65.00   24.00   70.00           1.89719  
> 1.00000  -0.00010  1.00000
> 114           1          8.0      41.00   24.00   36.00           1.89653  
> 1.00000  -0.00010  1.00000
> 115           7         56.0      71.00   32.00   91.00           1.89529  
> 1.00000  -0.00010  1.00000
> 116           6         48.0      24.00   38.00   69.00           1.88993  
> 1.00000  -0.00010  1.00000
> 117           4         32.0       6.00   22.00   34.00           1.88833  
> 1.00000  -0.00010  1.00000
> 118           3         24.0      41.00   45.00   51.00           1.87881  
> 1.00000  -0.00010  1.00000
> 119           2         16.0      18.00   58.00   91.00           1.87841  
> 1.00000  -0.00010  1.00000
> 120           3         24.0      44.00   10.00   17.00           1.87792  
> 1.00000  -0.00010  1.00000
> 121           4         32.0       7.00   38.00   71.00           1.87444  
> 1.00000  -0.00010  1.00000
> 122           2         16.0      39.00   12.00   65.00           1.87242  
> 1.00000  -0.00010  1.00000
> 123           7         56.0      25.00   35.00   38.00           1.87054  
> 1.00000  -0.00010  1.00000
> 124           3         24.0      14.00   28.00   25.00           1.86776  
> 1.00000  -0.00010  1.00000
> 125           4         32.0      64.00   23.00   76.00           1.86629  
> 1.00000  -0.00010  1.00000
> 126           7         56.0      58.00   44.00   43.00           1.86598  
> 1.00000  -0.00010  1.00000
> 127           1          8.0      40.00   44.00   63.00           1.86487  
> 1.00000  -0.00010  1.00000
> 128           1          8.0      19.00    8.00   55.00           1.84677  
> 1.00000  -0.00010  1.00000
> 129           1          8.0      59.00   58.00   80.00           1.84162  
> 1.00000  -0.00010  1.00000
> 130           1          8.0      16.00   40.00   92.00           1.83828  
> 1.00000  -0.00010  1.00000
> 131           2         16.0      21.00   42.00   63.00           1.83258  
> 1.00000  -0.00010  1.00000
> 132           6         48.0       2.00   19.00   69.00           1.82733  
> 1.00000  -0.00010  1.00000
> 133           1          8.0      25.00   45.00   73.00           1.81604  
> 1.00000  -0.00010  1.00000
> 134           1          8.0       6.00   10.00   48.00           1.81496  
> 1.00000  -0.00010  1.00000
> 135           2         16.0       9.00    7.00   43.00           1.80712  
> 1.00000  -0.00010  1.00000
> 136           1          8.0      36.00    2.00   53.00           1.80667  
> 1.00000  -0.00010  1.00000
> 137           1          8.0      19.00   43.00   60.00           1.80358  
> 1.00000  -0.00010  1.00000
> 138           1          8.0      24.00    0.00   25.00           1.80337  
> 1.00000  -0.00010  1.00000
> 139           2         16.0      25.00    5.00   42.00           1.79990  
> 1.00000  -0.00010  1.00000
> 140           4         32.0      69.00   18.00   40.00           1.79854  
> 1.00000  -0.00010  1.00000
> 141           1          8.0      62.00   48.00   85.00           1.79309  
> 1.00000  -0.00010  1.00000
> 142           4         32.0      61.00   43.00   84.00           1.78916  
> 1.00000  -0.00010  1.00000
> 143           1          8.0      13.00   13.00   34.00           1.78877  
> 1.00000  -0.00010  1.00000
> 144           1          8.0      34.00   28.00   78.00           1.78826  
> 1.00000  -0.00010  1.00000
> 145           3         24.0      69.00   32.00   83.00           1.78152  
> 1.00000  -0.00010  1.00000
> 146           1          8.0      14.00   11.00   33.00           1.78004  
> 1.00000  -0.00010  1.00000
> 147           1          8.0      70.00   19.00   25.00           1.77961  
> 1.00000  -0.00010  1.00000
> 148           1          8.0      24.00    1.00   50.00           1.77625  
> 1.00000  -0.00010  1.00000
> 149           1          8.0       3.00   35.00   84.00           1.77073  
> 1.00000  -0.00010  1.00000
> 150           1          8.0      22.00   43.00   64.00           1.77048  
> 1.00000  -0.00010  1.00000
> 151           1          8.0      25.00   63.00   83.00           1.76957  
> 1.00000  -0.00010  1.00000
> 152           1          8.0      52.00   57.00   72.00           1.76913  
> 1.00000  -0.00010  1.00000
> 153           1          8.0       6.00   24.00   31.00           1.76905  
> 1.00000  -0.00010  1.00000
> 154           1          8.0       7.00   37.00   72.00           1.76885  
> 1.00000  -0.00010  1.00000
> 155           2         16.0      75.00   24.00   12.00           1.76788  
> 1.00000  -0.00010  1.00000
> 156           1          8.0      64.00   38.00   42.00           1.76533  
> 1.00000  -0.00010  1.00000
> 157           1          8.0      54.00   32.00   84.00           1.76446  
> 1.00000  -0.00010  1.00000
> 158           1          8.0      23.00   38.00   88.00           1.76098  
> 1.00000  -0.00010  1.00000
> 159           1          8.0       6.00   40.00   33.00           1.75765  
> 1.00000  -0.00010  1.00000
> 160           1          8.0      22.00   25.00    9.00           1.75009  
> 1.00000  -0.00010  1.00000
> 161           2         16.0      67.00    3.00   52.00           1.74760  
> 1.00000  -0.00010  1.00000
> 162           2         16.0      28.00   67.00   70.00           1.74531  
> 1.00000  -0.00010  1.00000
> 163           1          8.0       4.00   33.00   30.00           1.74303  
> 1.00000  -0.00010  1.00000
> 164           1          8.0      69.00   20.00   74.00           1.74160  
> 1.00000  -0.00010  1.00000
> 165           1          8.0      18.00   21.00   55.00           1.74153  
> 1.00000  -0.00010  1.00000
> 166           2         16.0      31.00   25.00   80.00           1.73939  
> 1.00000  -0.00010  1.00000
> 167           2         16.0      22.00   40.00   63.00           1.73425  
> 1.00000  -0.00010  1.00000
> 168           2         16.0      68.00   21.00   74.00           1.72982  
> 1.00000  -0.00010  1.00000
> 169           2         16.0       7.00   18.00   27.00           1.72964  
> 1.00000  -0.00010  1.00000
> 170           1          8.0      11.00   29.00   60.00           1.72963  
> 1.00000  -0.00010  1.00000
> 171           1          8.0      25.00   65.00   86.00           1.72933  
> 1.00000  -0.00010  1.00000
> 172           1          8.0      40.00   10.00   56.00           1.72897  
> 1.00000  -0.00010  1.00000
> 173           2         16.0      40.00   56.00   61.00           1.72244  
> 1.00000  -0.00010  1.00000
> 174           1          8.0      17.00   67.00   74.00           1.72103  
> 1.00000  -0.00010  1.00000
> 175           1          8.0      42.00   67.00   70.00           1.71913  
> 1.00000  -0.00010  1.00000
> 176           1          8.0      25.00   64.00   85.00           1.71646  
> 1.00000  -0.00010  1.00000
> 177           1          8.0       9.00   38.00   73.00           1.71532  
> 1.00000  -0.00010  1.00000
> 178           1          8.0       4.00   34.00   31.00           1.71458  
> 1.00000  -0.00010  1.00000
> 179           1          8.0       3.00   22.00    7.00           1.71416  
> 1.00000  -0.00010  1.00000
> 180           1          8.0      31.00   50.00   89.00           1.71002  
> 1.00000  -0.00010  1.00000
> 181           1          8.0      51.00    7.00   19.00           1.70870  
> 1.00000  -0.00010  1.00000
> 182           1          8.0      43.00    1.00   48.00           1.70621  
> 1.00000  -0.00010  1.00000
> 183           1          8.0      22.00   36.00   41.00           1.70538  
> 1.00000  -0.00010  1.00000
> 184           1          8.0       1.00   22.00   71.00           1.70431  
> 1.00000  -0.00010  1.00000
> 185           1          8.0      65.00   20.00    5.00           1.70426  
> 1.00000  -0.00010  1.00000
> 186           1          8.0      70.00   10.00   43.00           1.70299  
> 1.00000  -0.00010  1.00000
> 187           1          8.0      11.00   17.00   62.00           1.70210  
> 1.00000  -0.00010  1.00000
> 188           1          8.0       1.00   21.00   70.00           1.70207  
> 1.00000  -0.00010  1.00000
> 189           1          8.0      35.00   26.00   63.00           1.70166  
> 1.00000  -0.00010  1.00000
> 190           1          8.0      11.00   37.00   66.00           1.70059  
> 1.00000  -0.00010  1.00000
> 191           1          8.0      22.00   37.00   70.00           1.70035  
> 1.00000  -0.00010  1.00000
> 192           1          8.0      25.00   14.00   22.00           1.69897  
> 1.00000  -0.00010  1.00000
> 
> 
> Date: Tue, 25 Jun 2013 12:22:23 -0400
> From: Douglas N Greve <gr...@nmr.mgh.harvard.edu>
> Subject: Re: [Freesurfer] Monte Carlo simulation: Talairach
>       coordinates
> To: freesurfer@nmr.mgh.harvard.edu
> Message-ID: <51c9c3bf.7000...@nmr.mgh.harvard.edu>
> Content-Type: text/plain; charset=ISO-8859-1; format=flowed
> 
> can you send the file?
> 
> On 06/25/2013 10:08 AM, Emily Boeke wrote:
>> Hi All,
>> 
>> I'm running Monte Carlo simulations on functional data, and the coordinate 
>> information outputted in the cluster.summary file isn't making sense. 
>> Usually the coordinates for the clusters listed are Talairach coordinates, 
>> but in the .summary files I'm getting, the coordinates are labeled "VoxX 
>> VoxY VoxZ" instead of "TalX TalY TalZ" and the numbers are clearly not 
>> Talairach coordinates. Above the table, it says "Reporting Coordinates in 
>> Voxel Indices." I also noted that in the descriptive information above the 
>> table, it says "Registration: None: Tal Coords invalid."
>> 
>> However, the .nii files I'm seeing look like I would expect them too.
>> 
>> I'm using the same command line I've run before, so I have no idea why the 
>> .summary file looks different. Does anyone know why this would be?
>> 
>> Thanks,
>> Emily

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