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• • Re: [Advent bug squashing] Just closed bug #1024954 of librcsb-core-wrapper Andreas Tille
• December is bug squashing month Andreas Tille
  • December is bug squashing month Andreas Tille
  • December is bug squashing month Andreas Tille
  • Re: December is bug squashing month Étienne Mollier
• Cmake help to upgrade spoa needed Andreas Tille
  • Re: Cmake help to upgrade spoa needed Nilesh Patra
  • Re: Cmake help to upgrade spoa needed Andreas Tille
• Bug#1024986: python-biopython: does not vendor bindings for python3.11 yet Nilesh Patra
• [help] vdjtools autopkgtest fails Andreas Tille
  • Re: [help] vdjtools autopkgtest fails Pierre Gruet
  • Re: [help] vdjtools autopkgtest fails Pierre Gruet
• cmake help needed for rampler Andreas Tille
  • Re: cmake help needed for rampler Nilesh Patra
  • Re: cmake help needed for rampler Andreas Tille
• [Help] Build issue of latest version of libsbml (probably Java compatibility issue) Andreas Tille
  • Re: [Help] Build issue of latest version of libsbml (probably Java compatibility issue) Pierre Gruet
  • Re: [Help] Build issue of latest version of libsbml (probably Java compatibility issue) Andreas Tille
  • Several issues solved but python issue remaining (Was: [Help] Build issue of latest version of libsbml (probably Java compatibility issue)) Andreas Tille
  • Re: Several issues solved but python issue remaining (Was: [Help] Build issue of latest version of libsbml (probably Java compatibility issue)) Étienne Mollier
  • Re: Several issues solved but python issue remaining (Was: [Help] Build issue of latest version of libsbml (probably Java compatibility issue)) Andreas Tille
  • Re: Several issues solved but python issue remaining (Was: [Help] Build issue of latest version of libsbml (probably Java compatibility issue)) Étienne Mollier
  • Re: Several issues solved but python issue remaining (Was: [Help] Build issue of latest version of libsbml (probably Java compatibility issue)) Andreas Tille
• Race condition in uploading libmcfp Andreas Tille
  • Re: Race condition in uploading libmcfp Maarten L. Hekkelman
  • Re: Race condition in uploading libmcfp Andreas Tille
• dssp Maarten L. Hekkelman
  • Re: dssp Andrius Merkys
• Help needed with python-cobra and python-pyani Andreas Tille
  • Re: Help needed with python-cobra and python-pyani Nilesh Patra
  • Re: Help needed with python-cobra and python-pyani Andreas Tille
  • Re: Help needed with python-cobra and python-pyani Andrius Merkys
• Plastimatch 1.9.4 second try Gregory Sharp
  • Re: Plastimatch 1.9.4 second try Étienne Mollier
• Bug#1024465: ITP: pyfastx -- fast random access to sequences from FASTA/Q file Étienne Mollier
• Bug#1024343: insighttoolkit4: releasability with bookworm? Étienne Mollier
• oops.. could someone with the proper rights... Maarten L. Hekkelman
  • Re: oops.. could someone with the proper rights... Étienne Mollier
  • Re: oops.. could someone with the proper rights... Nilesh Patra
  • Re: oops.. could someone with the proper rights... Étienne Mollier
• Re: Bug#1023807: seqan-needle: /usr/bin/needle is already shipped by emboss Andreas Tille
  • Re: Bug#1023807: seqan-needle: /usr/bin/needle is already shipped by emboss Andreas Tille
• Re: Bug#1024170: mcl breaks roary autopkgtest: different output Andreas Tille
  • Re: Bug#1024170: mcl breaks roary autopkgtest: different output Nilesh Patra
  • Re: Bug#1024170: mcl breaks roary autopkgtest: different output Nilesh Patra
  • Re: Bug#1024170: mcl breaks roary autopkgtest: different output Andreas Tille
  • Re: Bug#1024170: mcl breaks roary autopkgtest: different output Nilesh Patra
  • Re: Bug#1024170: mcl breaks roary autopkgtest: different output Andreas Tille
• re: command line invocation of aeskulap L Peter Deutsch
• looking for help to finish uploading libcifpp Maarten L. Hekkelman
  • Re: looking for help to finish uploading libcifpp Andrius Merkys
  • Re: looking for help to finish uploading libcifpp Maarten L. Hekkelman
  • Re: looking for help to finish uploading libcifpp Andrius Merkys
  • Re: looking for help to finish uploading libcifpp Maarten L. Hekkelman
• Re: Command line switches for aeskulap Andreas Tille
  • Re: Command line switches for aeskulap Karsten Hilbert
  • Re: Command line switches for aeskulap Sébastien Jodogne
  • Re: Command line switches for aeskulap roland.fr...@cross-mail.com
  • Re: Command line switches for aeskulap Karsten Hilbert
• salmon status in salsa Étienne Mollier
  • Re: salmon status in salsa Andreas Tille
  • Re: salmon status in salsa Étienne Mollier
  • Re: salmon status in salsa Andreas Tille
• Please update SIMDE patches in new version of kalign Andreas Tille
  • Re: Please update SIMDE patches in new version of kalign Nilesh Patra
  • Re: Please update SIMDE patches in new version of kalign Nilesh Patra
  • Re: Please update SIMDE patches in new version of kalign Michael Crusoe
• Build time error in new version of Proteinortho Andreas Tille
  • Re: Build time error in new version of Proteinortho Nilesh Patra
  • Re: Build time error in new version of Proteinortho Nilesh Patra
  • Re: Build time error in new version of Proteinortho Nilesh Patra
  • Re: Build time error in new version of Proteinortho Andreas Tille
• Help for new version of bowtie2 needed Andreas Tille
  • Re: Help for new version of bowtie2 needed Étienne Mollier
  • Re: Help for new version of bowtie2 needed Étienne Mollier
  • Re: Help for new version of bowtie2 needed Andreas Tille
  • Re: Help for new version of bowtie2 needed Étienne Mollier
  • Re: Help for new version of bowtie2 needed Andreas Tille
• Plastimatch new version Gregory Sharp
  • Re: Plastimatch new version Étienne Mollier
  • Re: Plastimatch new version Gregory Sharp
  • Re: Plastimatch new version Étienne Mollier
  • Re: Plastimatch new version Gregory Sharp
  • Re: Plastimatch new version Étienne Mollier
  • Re: Plastimatch new version Nilesh Patra
• Bug#1023390: RM: nifti2dicom -- ROM; Depends from prerequistes that will be removed soon, not maintained upstream any more Andreas Tille
• Bug#1023389: RM: simpleitk -- ROM; Has RC bugs but no active maintainer Andreas Tille
• Bug#1023060: RM: nthash [armel armhf i386 mipsel s390x] -- ROM; B-D btllib un-supported on 32-bit Nilesh Patra
• Bug#1023059: RM: libnthash-dev [arch:all] -- ROM; architecture change from all to any Nilesh Patra
• Possibility of In-person sprints in 2023? Nilesh Patra
  • Re: Possibility of In-person sprints in 2023? Andreas Tille
  • Aw: Re: Possibility of In-person sprints in 2023? Steffen Möller
  • Re: Possibility of In-person sprints in 2023? Andreas Tille
  • Re: Possibility of In-person sprints in 2023? Sascha Steinbiss
  • Re: Possibility of In-person sprints in 2023? Étienne Mollier
  • Re: Possibility of In-person sprints in 2023? Pierre Gruet
  • Re: Possibility of In-person sprints in 2023? Andreas Tille
  • Re: Possibility of In-person sprints in 2023? Sascha Steinbiss
  • Re: Possibility of In-person sprints in 2023? Matus Kalas
  • Re: Possibility of In-person sprints in 2023? Sascha Steinbiss
  • Re: Possibility of In-person sprints in 2023? Andreas Tille
  • Re: Possibility of In-person sprints in 2023? Pierre Gruet
  • Re: Possibility of In-person sprints in 2023? Andreas Tille
  • Re: Possibility of In-person sprints in 2023? olivier sallou
  • Re: Possibility of In-person sprints in 2023? Andreas Tille
• Removing simpleitk from Debian (Was: simpleitk FTBFS: test failures) Andreas Tille
• Asking for removal from Debian (Was: nifti2dicom: vtk[6,7] removal) Andreas Tille
• Minimac4 needs new autopkgtest Andreas Tille
• cmake help for minimac4 needed Andreas Tille
  • Re: cmake help for minimac4 needed Andrius Merkys
  • Re: cmake help for minimac4 needed Andreas Tille
  • Watch file github mode pointing to certain branch issue (Was: cmake help for minimac4 needed) Andreas Tille
  • Re: Watch file github mode pointing to certain branch issue (Was: cmake help for minimac4 needed) Andrius Merkys
  • Re: Watch file github mode pointing to certain branch issue (Was: cmake help for minimac4 needed) Andreas Tille
  • Re: Watch file github mode pointing to certain branch issue (Was: cmake help for minimac4 needed) Andrius Merkys
  • Re: Watch file github mode pointing to certain branch issue (Was: cmake help for minimac4 needed) Nilesh Patra
  • Re: Watch file github mode pointing to certain branch issue (Was: cmake help for minimac4 needed) Andreas Tille
• Re: gdcm: vtk[6,7] removal Andreas Tille
  • Re: gdcm: vtk[6,7] removal Mathieu Malaterre
  • Re: gdcm: vtk[6,7] removal Andreas Tille
  • Re: gdcm: vtk[6,7] removal Pierre Gruet
  • Re: gdcm: vtk[6,7] removal Andreas Tille
  • Re: gdcm: vtk[6,7] removal Pierre Gruet
  • Re: gdcm: vtk[6,7] removal Mathieu Malaterre
  • Re: gdcm: vtk[6,7] removal Andreas Tille
  • Re: gdcm: vtk[6,7] removal Mathieu Malaterre
• Probably simple cmake help needed for nthash Andreas Tille
  • Re: Probably simple cmake help needed for nthash Nilesh Patra
  • Re: Probably simple cmake help needed for nthash Andreas Tille
  • Re: Probably simple cmake help needed for nthash Nilesh Patra
• Please have a look at beast2-mcmc in Git Andreas Tille
  • Re: Please have a look at beast2-mcmc in Git Pierre Gruet
  • Re: Please have a look at beast2-mcmc in Git Andreas Tille
• Bug#1022258: ITP: libmjson-java -- lean JSON Library for Java with a compact API Pierre Gruet
  • Bug#1022258: marked as done (ITP: libmjson-java -- lean JSON Library for Java with a compact API) Debian Bug Tracking System
• included git submodules Maarten L. Hekkelman
  • Re: included git submodules Yaroslav Halchenko
• Htslib plugins James Bonfield
  • Re: Htslib plugins Aaron M. Ucko
  • Re: Htslib plugins [EXT] James Bonfield
  • Re: Htslib plugins [EXT] Étienne Mollier
  • Re: Htslib plugins [EXT] Étienne Mollier
  • Re: Htslib plugins [EXT] James Bonfield
  • Re: Htslib plugins [EXT] Étienne Mollier
  • Re: Htslib plugins Étienne Mollier
• Bug#1021934: ITP: biojava6-live -- Java API to biological data and applications (version 6) Pierre Gruet
  • Bug#1021934: marked as done (ITP: biojava6-live -- Java API to biological data and applications (version 6)) Debian Bug Tracking System
• Re: failed i386 build of fis-gtm 7.0-004-1 Shah, Amul
• Re: python3-biopython: incompatible with muscle >= 5 Andrius Merkys
  • Re: python3-biopython: incompatible with muscle >= 5 Andreas Tille
  • Re: python3-biopython: incompatible with muscle >= 5 Andrius Merkys
  • Re: python3-biopython: incompatible with muscle >= 5 Andreas Tille
  • Re: python3-biopython: incompatible with muscle >= 5 Étienne Mollier
  • Re: [Debian-med-packaging] Bug#1009118: python3-biopython: incompatible with muscle >= 5 Charles Plessy
  • Re: [Debian-med-packaging] Bug#1009118: python3-biopython: incompatible with muscle >= 5 Steffen Moeller
  • Re: Bug#1009118: Bug#1009118: python3-biopython: incompatible with muscle >= 5 Andreas Tille
  • Re: python3-biopython: incompatible with muscle >= 5 Étienne Mollier
  • Re: python3-biopython: incompatible with muscle >= 5 Andreas Tille
  • Re: python3-biopython: incompatible with muscle >= 5 Étienne Mollier
  • Re: python3-biopython: incompatible with muscle >= 5 Andreas Tille
  • Re: python3-biopython: incompatible with muscle >= 5 Étienne Mollier
• Re: Interest in the Dabian med project Andreas Tille
• Outdated documentation in fis-gtm (Was: Fwd: fis-gtm_6.3-014-3_amd64.deb) Andreas Tille
• pufferfish wants to link with twopaco and ntcard Andrius Merkys
  • Re: pufferfish wants to link with twopaco and ntcard Andreas Tille
  • Re: pufferfish wants to link with twopaco and ntcard Steffen Moeller
  • Re: pufferfish wants to link with twopaco and ntcard Andrius Merkys
  • Re: pufferfish wants to link with twopaco and ntcard Steffen Moeller
  • Re: pufferfish wants to link with twopaco and ntcard Andrius Merkys
  • Re: pufferfish wants to link with twopaco and ntcard Andreas Tille
  • Re: pufferfish wants to link with twopaco and ntcard Andrius Merkys
  • Re: pufferfish wants to link with twopaco and ntcard Andreas Tille
• BART 0.8.0 Martin Uecker
  • Re: BART 0.8.0 Andreas Tille
  • Re: BART 0.8.0 Nilesh Patra
  • Re: BART 0.8.0 Martin Uecker
  • Re: BART 0.8.0 Andreas Tille
  • Re: BART 0.8.0 Andreas Tille
  • Re: BART 0.8.0 Martin Uecker
  • Re: BART 0.8.0 Martin Uecker
  • Re: BART 0.8.0 Andreas Tille
  • Re: BART 0.8.0 Andreas Tille
  • Re: BART 0.8.0 Martin Uecker
  • Re: BART 0.8.0 Martin Uecker
  • Re: BART 0.8.0 Nilesh Patra
  • Re: BART 0.8.0 Martin Uecker
  • Re: BART 0.8.0 Nilesh Patra
  • Re: BART 0.8.0 Martin Uecker
  • Re: BART 0.8.0 Nilesh Patra
  • Re: BART 0.8.0 Martin Uecker
• [Help] New version of htslib does not build Andreas Tille
  • Re: [Help] New version of htslib does not build Aaron M. Ucko
  • Re: [Help] New version of htslib does not build John Marshall
  • Re: [Help] New version of htslib does not build Andreas Tille
  • Re: [Help] New version of htslib does not build Nilesh Patra
  • Re: [Help] New version of htslib does not build Andreas Tille
  • Re: [Help] New version of htslib does not build Nilesh Patra
  • Re: [Help] New version of htslib does not build Étienne Mollier
  • Re: [Help] New version of htslib does not build Étienne Mollier
  • Re: [Help] New version of htslib does not build John Marshall

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