It looks like some Perl modules are missing. These instructions will help install those!
https://metacpan.org/source/BTMCINNES/UMLS-Interface-1.51/INSTALL On Tue, Sep 17, 2019 at 2:36 PM Hong Guan [email protected] [umls-similarity] < [email protected]> wrote: > > > I install UMLS and MySQL 5.7. The error prompt says > > Warning: prerequisite DBD::mysql 0 not found. >> Warning: prerequisite DBI 0 not found. >> Warning: prerequisite Digest::SHA1 2.12 not found. >> Generating a Unix-style Makefile >> Writing Makefile for UMLS::Interface >> Writing MYMETA.yml and MYMETA.json > > > Looks like it recognizes UMLS but not MySQL. What do I do now? > > Thanks, > > On Mon, Sep 16, 2019 at 11:04 AM Ted Pedersen [email protected] > [umls-similarity] <[email protected]> wrote: > >> >> >> The National Library of Medicine has some pretty good instructions on how >> to install UMLS. >> >> https://www..nlm.nih.gov/research/umls/quickstart.html >> <https://www.nlm.nih.gov/research/umls/quickstart.html> >> >> On Mon, Sep 16, 2019 at 1:00 PM [email protected] [umls-similarity] < >> [email protected]> wrote: >> >>> >>> >>> I am new to this package. Can anyone tell me how I >>> install UMLS-Similarity from scratch? The system I am using is Ubuntu 18.04. >>> >>> It seems that I need to install UMLS and MySQL before installing >>> UMLS-Similarity. Am I correct? If that is the case, how do I install UMLS? >>> I do know how to install MySQL. >>> >>> > > -- > > Hong Guan > > Research Assistant, Biomedical Informatics > > College of Health Solutions > > Arizona State University > > >
