it should be exact
On Wed, 20 Sep 2017, Fereshte wrote:
Does it give the exact volume ( the volume which the surface was made from) or
it gives an
approximation of the volume? ( the toolboxes I've already worked with for such
a purpose; give poor
approximations).
Thank you!
On Tue, Sep 19,
Does it give the exact volume ( the volume which the surface was made
from) or it gives an approximation of the volume? ( the toolboxes I've
already worked with for such a purpose; give poor approximations).
Thank you!
On Tue, Sep 19, 2017 at 6:40 PM Bruce Fischl
wrote:
> Hi Fereshte
>
> mris_v
Hi Fereshte
mris_volumes computes and prints the volume of the interior of a closed
surface (a single number). It does not fill the interior. For that, use
mris_fill
cheers
Bruce
On Tue, 19 Sep 2017, Fereshte wrote:
Dear Professor Bruce
I'm just trying to convert lh.pial surface to the vol
Dear Professor Bruce
I'm just trying to convert lh.pial surface to the volume with the down
below command but the output doesn't make any sense ( lh.voulme contains
zero). Could you please help?
Mris_volume topo_defect_after/surf/rh.pial
Thank you!
On Tue, Sep 19, 2017 at 1:11 PM Fereshte
wrote:
I changed the FreeSurfer version to 6 and now i could find it.
Thank you!
Cheers
On Sat, Sep 16, 2017 at 9:21 PM Douglas Greve
wrote:
> Is it not in $FREESURFER_HOME/bin ? What version are you using?
>
> On 9/16/17 12:05 PM, Fereshte wrote:
>
> Well i did ask if it was possible to obtain the vol
Is it not in $FREESURFER_HOME/bin ? What version are you using?
On 9/16/17 12:05 PM, Fereshte wrote:
Well i did ask if it was possible to obtain the volume of Pial surface
and here's the response;
"sure, mris_volume will give you the interior volume of any closed surface
using the divergence
Well i did ask if it was possible to obtain the volume of Pial surface and
here's the response;
"sure, mris_volume will give you the interior volume of any closed surface
using the divergence formula. Note that this is *not* the volume of the
ribbon but rather the volume of the entire interior"
I
sorry, can you clarify what your question is?
On Sat, 16 Sep 2017, Fereshte
wrote:
Dear FreeSurfer developers
I couldn't find the mentioned mris_volume in the commands. Shall i use
mri_vol2surf or something?
Looking forward to hearing from you!
On Tue, Sep 5, 2017 at 9:46 AM Fereshte wro
Dear FreeSurfer developers
I couldn't find the mentioned mris_volume in the commands. Shall i use
mri_vol2surf or something?
Looking forward to hearing from you!
On Tue, Sep 5, 2017 at 9:46 AM Fereshte wrote:
> Hi Bruce,
> Thank you for your replies.
> Cheers
>
> On Tue, Sep 5, 2017 at 4:52 AM Br
Hi Bruce,
Thank you for your replies.
Cheers
On Tue, Sep 5, 2017 at 4:52 AM Bruce Fischl
wrote:
> Hi Fereshte
>
> the algorithm is documented in the recon1 1999 NeuroImage and 2000 PNAS
> papers
>
> cheers
> Bruce
> On Mon, 4 Sep 2017, Fereshte wrote:
>
> > What's the algorithm used to expand inn
Hi Fereshte
the algorithm is documented in the recon1 1999 NeuroImage and 2000 PNAS
papers
cheers
Bruce
On Mon, 4 Sep 2017, Fereshte wrote:
What's the algorithm used to expand inner cortical boundary ( to achieve the
outer cortical boundary
in pial surface) in FreeSurfer?
On Mon, Sep 4, 201
What's the algorithm used to expand inner cortical boundary ( to achieve
the outer cortical boundary in pial surface) in FreeSurfer?
On Mon, Sep 4, 2017 at 9:58 PM Bruce Fischl
wrote:
> it will give the interior volume of whatever surface you give it as a
> command line argument.
>
> On Mon, 4 Se
it will give the interior volume of whatever surface you give it as a
command line argument.
On Mon, 4 Sep 2017, Fereshte
wrote:
Using the Pial surface; Does it mean mris_volume will give the inner cortical
boundary of the
surface and not the outer boundary?
Sincerely,
Fereshte Ramezani
On
Using the Pial surface; Does it mean mris_volume will give the inner
cortical boundary of the surface and not the outer boundary?
Sincerely,
Fereshte Ramezani
On Mon, Sep 4, 2017 at 9:53 PM Fereshte wrote:
>
> On Mon, Sep 4, 2017 at 6:46 PM Bruce Fischl
> wrote:
>
>> sure, mris_volume will give
sure, mris_volume will give you the interior volume of any closed surface
using the divergence formula. Note that this is *not* the volume of the
ribbon but rather the volume of the entire interior
cheers
Bruce
On Mon, 4 Sep 2017, Fereshte wrote:
Hello FreeSurfer developersIs it possible to
Hello FreeSurfer developers
Is it possible to have the volume of pial surface in FreeSurfer?
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