Re: [Freesurfer] Monte Carlo Simulation w/ custom design matrix

2008-04-18 Thread Jerry Yeou-Wei Chen
Actually, I do have the fwhm.dat file... I was just commenting on how obvious that should have been to me! Thanks, though! - Jerry On Fri, Apr 18, 2008 at 10:56 AM, Pratap Kunwar <[EMAIL PROTECTED]> wrote: > Jerry, > > can you post your command lines and log file? there should be fwhm.dat > along

Re: [Freesurfer] Monte Carlo Simulation w/ custom design matrix

2008-04-18 Thread Pratap Kunwar
Jerry, can you post your command lines and log file? there should be fwhm.dat along with the y.fsgd. > How did I miss that??? > Thanks! > - Jerry > > On Thu, Apr 17, 2008 at 3:01 PM, Doug Greve <[EMAIL PROTECTED]> > wrote: > >> there should be a fwhm.dat file in the output. >> >> doug >> >> >> J

Re: [Freesurfer] Monte Carlo Simulation w/ custom design matrix

2008-04-18 Thread Jerry Yeou-Wei Chen
How did I miss that??? Thanks! - Jerry On Thu, Apr 17, 2008 at 3:01 PM, Doug Greve <[EMAIL PROTECTED]> wrote: > there should be a fwhm.dat file in the output. > > doug > > > Jerry Yeou-Wei Chen wrote: > > Hello, > > I have a question regarding performing Monte Carlo simulations when a > custom d

Re: [Freesurfer] Monte Carlo Simulation w/ custom design matrix

2008-04-17 Thread Doug Greve
there should be a fwhm.dat file in the output. doug Jerry Yeou-Wei Chen wrote: Hello, I have a question regarding performing Monte Carlo simulations when a custom design matrix is being used. The wiki says that "For both MC simulations, you must supply the smoothness of your data as Full-Wi

[Freesurfer] Monte Carlo Simulation w/ custom design matrix

2008-04-17 Thread Jerry Yeou-Wei Chen
Hello, I have a question regarding performing Monte Carlo simulations when a custom design matrix is being used. The wiki says that "For both MC simulations, you must supply the smoothness of your data as Full-Width/Half-Max (FWHM) of the residual. This can be obtained from the ResidualFWHM value