How did I miss that??? Thanks! - Jerry On Thu, Apr 17, 2008 at 3:01 PM, Doug Greve <[EMAIL PROTECTED]> wrote:
> there should be a fwhm.dat file in the output. > > doug > > > Jerry Yeou-Wei Chen wrote: > > Hello, > > I have a question regarding performing Monte Carlo simulations when a > custom design matrix is being used. > The wiki says that "For both MC simulations, you must supply the > smoothness of your data as Full-Width/Half-Max (FWHM) of the residual. This > can be obtained from the ResidualFWHM value in y.fsgd in the glm output > directory." > If I understand correctly, this means that the --fwhm flag should be > specified when running mri_glmfit to generate CSD's... However, when running > a custom design matrix, the y.fsgd file is not generated (since the --fsgd > flag cannot be specified at the same time as --X). > So, my question is: how do I get the required FWHM value? > > Thanks, > - Jerry > > ------------------------------ > > _______________________________________________ > Freesurfer mailing [EMAIL > PROTECTED]://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > -- > Douglas N. Greve, Ph.D. > MGH-NMR [EMAIL PROTECTED] > Phone Number: 617-724-2358 > Fax: 617-726-7422 > > In order to help us help you, please follow the steps > in:surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > >
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