Re: [ccp4bb] CYS mod

2015-05-18 Thread Gert Vriend
The site swift.cmbi.ru.nl/gv/numbers/ is not official, unpublished, and still poorly maintained. But just for the fun of it, I added a list of modified cysteines. Be aware that the files are big, so better download them and read them in the editor than opening them in the browser. Gert On 05

Re: [ccp4bb] CYS mod

2015-05-13 Thread Roger Rowlett
CP4 bulletin board [CCP4BB@JISCMAIL.AC.UK <mailto:CCP4BB@JISCMAIL.AC.UK>] on behalf of Bio Physics [biophysics.w...@gmail.com <mailto:biophysics.w...@gmail.com>] *Sent:* Tuesday, May 12, 2015 11:57 PM *To:* CCP4BB@JISCMAIL.

Re: [ccp4bb] CYS mod

2015-05-13 Thread Bio Physics
84105 >>> Israel >>> E-mail: >>> bshaa...@bgu.ac.il Phone: 972-8-647-2220 Skype: >>> boaz.shaanan Fax: 972-8-647-2992 or 972-8-646-1710* >>> >>> >>> >

Re: [ccp4bb] CYS mod

2015-05-13 Thread Bio Physics
n University of the Negev > > Beer-Sheva 84105 > > Israel > > > > E-mail: bshaa...@bgu.ac.il > > Phone: 972-8-647-2220 Skype: boaz.shaanan > > Fax: 972-8-647-2992 or 972-8-646-1710 > > > > > > > > > > From: CCP4 bulletin board [CCP4

[ccp4bb] AW: [ccp4bb] CYS mod

2015-05-13 Thread Herman . Schreuder
. Best, Herman Von: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] Im Auftrag von Bio Physics Gesendet: Mittwoch, 13. Mai 2015 00:16 An: CCP4BB@JISCMAIL.AC.UK Betreff: Re: [ccp4bb] CYS mod No, it is not sulfenic acid or so, I had that in differend structure. It is L shaped from S, and linear if

Re: [ccp4bb] CYS mod

2015-05-12 Thread Bio Physics
nan Fax: 972-8-647-2992 or 972-8-646-1710* >> >> >> >> >> >> ---------- >> *From:* CCP4 bulletin board [CCP4BB@JISCMAIL.AC.UK] on behalf of Bio >> Physics [biophysics.w...@gmail.com] >> *Sent:* Tue

Re: [ccp4bb] CYS mod

2015-05-12 Thread Artem Evdokimov
t; > > > > > -- > *From:* CCP4 bulletin board [CCP4BB@JISCMAIL.AC.UK] on behalf of Bio > Physics [biophysics.w...@gmail.com] > *Sent:* Tuesday, May 12, 2015 11:57 PM > *To:* CCP4BB@JISCMAIL.AC.UK > *Subject:* Re: [ccp4bb] CYS mod > >

Re: [ccp4bb] CYS mod

2015-05-12 Thread Boaz Shaanan
t: Tuesday, May 12, 2015 11:57 PM To: CCP4BB@JISCMAIL.AC.UK Subject: Re: [ccp4bb] CYS mod Hi All, I have same type of modified CYS !!! No BME. On Tue, May 12, 2015 at 2:59 PM, David Schuller <schul...@cornell.edu> wrote: So far almost everyone is suggesting BME. I didn&

Re: [ccp4bb] CYS mod

2015-05-12 Thread David Schuller
So far almost everyone is suggesting BME. I didn't do the purification & crystallization myself, but I am told: Buffer was HEPES cryo was ethylene glycol, glycerol and DMSO. Some MgSO4 and KPO4 No BME, but maybe some DTT. Purified from a proteobacterium. On 05/12/15 15:20, Dyda wrote: What

Re: [ccp4bb] CYS mod

2015-05-12 Thread Jurgen Bosch
BME around ? Jürgen .. Jürgen Bosch Johns Hopkins University Bloomberg School of Public Health Department of Biochemistry & Molecular Biology Johns Hopkins Malaria Research Institute 615 North Wolfe Street, W8708 Baltimore, MD 21205 Office: +1-410-614-4742 Lab: +1-410-614-4

Re: [ccp4bb] CYS mod

2015-05-12 Thread Artem Evdokimov
Smells like BME to me... On May 12, 2015 2:32 PM, "David Schuller" wrote: > What are the most likely modifications of a CYS residue? I am attaching > images of a couple of residues in my current structure. Blue is 2Fo-Fc, > Green is Fo-Fc positive difference, purple is model-phased anomalous > di