Thanks Diego, But, the latest I found on downloads of gromcs webpage was 4.0.3! Is 4.0.4 somewhere else?
Payman From: gmx-users-boun...@gromacs.org [mailto:gmx-users-boun...@gromacs.org] On Behalf Of Diego Enry Gomes Sent: May 8, 2009 11:27 AM To: Discussion list for GROMACS users Subject: Re: [gmx-users] make install-mdrun get gromacs 4.04 Confirm if you changed the permissions correctly and can write anywhere in /usr/local/ Are you doing this as 'root' or super user (sudo) ? Because if you are just a regular user, will won't be able to change the permissions in /usr/local/. So, configure gmx to be installed in your local dir. ./configure --prefix=/global/home/pirzadeh/gmx404 On May 8, 2009, at 10:10 AM, Payman Pirzadeh wrote: Hi All, I realized that I am missing (Lib and bin folders) analysis tools and mdrun MPI. I re-installed the GROMACS 4.0.3, and I found that when I get to 'make install-mdrun' the following messages show up ( I am just copying last lines): make[2]: *** [install-libLTLIBRARIES] Error 1 make[2]: Leaving directory `/global/home/pirzadeh/GROMACS4.0.3/gromacs/src/mdlib' make[1]: *** [install-am] Error 2 make[1]: Leaving directory `/global/home/pirzadeh/GROMACS4.0.3/gromacs/src/mdlib' (cd ./src/kernel && make install-mdrun ; exit 0) make[1]: Entering directory `/global/home/pirzadeh/GROMACS4.0.3/gromacs/src/kernel' /bin/sh ../../config/mkinstalldirs /usr/local/gromacs/bin mkdir -p -- /usr/local/gromacs/bin mkdir: cannot create directory `/usr/local/gromacs': Permission denied make[1]: *** [install-mdrun] Error 1 make[1]: Leaving directory `/global/home/pirzadeh/GROMACS4.0.3/gromacs/src/kernel' I changed the permissions and I am still receiving the same message. I will e appreciated if someone tell me what is going wrong?! Payman _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
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