get gromacs 4.04
Confirm if you changed the permissions correctly and can write
anywhere in /usr/local/
Are you doing this as 'root' or super user (sudo) ? Because if you
are just a regular user, will won't be able to change the permissions
in /usr/local/. So, configure gmx to be installed in your local dir.
./configure --prefix=/global/home/pirzadeh/gmx404
On May 8, 2009, at 10:10 AM, Payman Pirzadeh wrote:
Hi All,
I realized that I am missing (Lib and bin folders) analysis tools
and mdrun MPI. I re-installed the GROMACS 4.0.3, and I found that
when I get to ‘make install-mdrun’ the following messages show up
( I am just copying last lines):
make[2]: *** [install-libLTLIBRARIES] Error 1
make[2]: Leaving directory `/global/home/pirzadeh/GROMACS4.0.3/
gromacs/src/mdlib'
make[1]: *** [install-am] Error 2
make[1]: Leaving directory `/global/home/pirzadeh/GROMACS4.0.3/
gromacs/src/mdlib'
(cd ./src/kernel && make install-mdrun ; exit 0)
make[1]: Entering directory `/global/home/pirzadeh/GROMACS4.0.3/
gromacs/src/kernel'
/bin/sh ../../config/mkinstalldirs /usr/local/gromacs/bin
mkdir -p -- /usr/local/gromacs/bin
mkdir: cannot create directory `/usr/local/gromacs': Permission denied
make[1]: *** [install-mdrun] Error 1
make[1]: Leaving directory `/global/home/pirzadeh/GROMACS4.0.3/
gromacs/src/kernel'
I changed the permissions and I am still receiving the same message.
I will e appreciated if someone tell me what is going wrong?!
Payman
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