External Email - Use Caution        

Hi Yujing,

Sure thing.

Full command:

mris_label2annot  --s sub-DAEK --hemi lh --ctab
/mnt/c/Users/Ben/Documents/GitHub/parcellationPipeline/li2019_to_dti/yeo2011nodesLUT.txt
--a yeo2011nodes --maxstatwinner --l Net_10_ROIs_1_lh_native_dil2 --l
Net_10_ROIs_1_rh_native_dil2 --l Net_11_ROIs_1_lh_native_dil2 --l
Net_11_ROIs_1_rh_native_dil2  --l Net_12_ROIs_1_lh_native_dil2 --l
Net_12_ROIs_1_rh_native_dil2 --l Net_12_ROIs_2_lh_native_dil2 --l
Net_12_ROIs_2_rh_native_dil2 --l Net_13_ROIs_1_lh_native_dil2 --l
Net_13_ROIs_1_rh_native_dil2 --l Net_13_ROIs_2_lh_native_dil2 --l
Net_13_ROIs_2_rh_native_dil2 --l Net_13_ROIs_3_lh_native_dil2 --l
Net_13_ROIs_3_rh_native_dil2 --l Net_13_ROIs_4_lh_native_dil2 --l
Net_13_ROIs_4_rh_native_dil2 --l Net_13_ROIs_5_lh_native_dil2 --l
Net_14_ROIs_1_lh_native_dil2 --l Net_14_ROIs_1_rh_native_dil2 --l
Net_14_ROIs_2_lh_native_dil2 --l Net_14_ROIs_2_rh_native_dil2 --l
Net_14_ROIs_3_lh_native_dil2 --l Net_14_ROIs_3_rh_native_dil2 --l
Net_14_ROIs_4_lh_native_dil2 --l Net_14_ROIs_4_rh_native_dil2 --l
Net_14_ROIs_5_lh_native_dil2 --l Net_14_ROIs_5_rh_native_dil2 --l
Net_15_ROIs_1_lh_native_dil2 --l Net_15_ROIs_1_rh_native_dil2 --l
Net_16_ROIs_1_lh_native_dil2 --l Net_16_ROIs_1_rh_native_dil2 --l
Net_16_ROIs_2_lh_native_dil2 --l Net_16_ROIs_2_rh_native_dil2 --l
Net_16_ROIs_3_rh_native_dil2 --l Net_17_ROIs_1_lh_native_dil2 --l
Net_17_ROIs_1_rh_native_dil2 --l Net_17_ROIs_2_lh_native_dil2 --l
Net_17_ROIs_2_rh_native_dil2 --l Net_17_ROIs_3_lh_native_dil2 --l
Net_17_ROIs_3_rh_native_dil2 --l Net_17_ROIs_4_lh_native_dil2 --l
Net_17_ROIs_4_rh_native_dil2 --l Net_18_ROIs_1_lh_native_dil2 --l
Net_18_ROIs_1_rh_native_dil2 --l Net_18_ROIs_2_lh_native_dil2 --l
Net_18_ROIs_2_rh_native_dil2 --l Net_18_ROIs_3_lh_native_dil2 --l
Net_18_ROIs_3_rh_native_dil2 --l Net_18_ROIs_4_lh_native_dil2 --l
Net_18_ROIs_4_rh_native_dil2 --l Net_18_ROIs_5_lh_native_dil2 --l
Net_19_ROIs_1_lh_native_dil2 --l Net_19_ROIs_1_rh_native_dil2 --l
Net_2_ROIs_1_lh_native_dil2 --l Net_2_ROIs_1_rh_native_dil2 --l
Net_2_ROIs_2_lh_native_dil2 --l Net_2_ROIs_2_rh_native_dil2 --l
Net_3_ROIs_1_lh_native_dil2 --l Net_3_ROIs_1_rh_native_dil2 --l
Net_3_ROIs_2_lh_native_dil2 --l Net_3_ROIs_2_rh_native_dil2 --l
Net_3_ROIs_3_lh_native_dil2 --l Net_3_ROIs_3_rh_native_dil2 --l
Net_4_ROIs_1_lh_native_dil2 --l Net_4_ROIs_1_rh_native_dil2 --l
Net_5_ROIs_1_lh_native_dil2 --l Net_5_ROIs_1_rh_native_dil2 --l
Net_5_ROIs_2_lh_native_dil2 --l Net_5_ROIs_2_rh_native_dil2 --l
Net_5_ROIs_3_lh_native_dil2 --l Net_5_ROIs_3_rh_native_dil2 --l
Net_5_ROIs_4_lh_native_dil2 --l Net_5_ROIs_4_rh_native_dil2 --l
Net_6_ROIs_1_lh_native_dil2 --l Net_6_ROIs_1_rh_native_dil2 --l
Net_6_ROIs_2_lh_native_dil2 --l Net_6_ROIs_2_rh_native_dil2 --l
Net_6_ROIs_3_lh_native_dil2 --l Net_6_ROIs_3_rh_native_dil2 --l
Net_7_ROIs_1_lh_native_dil2 --l Net_7_ROIs_1_rh_native_dil2 --l
Net_7_ROIs_2_lh_native_dil2 --l Net_7_ROIs_2_rh_native_dil2 --l
Net_7_ROIs_3_rh_native_dil2 --l Net_8_ROIs_1_lh_native_dil2 --l
Net_8_ROIs_1_rh_native_dil2 --l Net_8_ROIs_2_lh_native_dil2 --l
Net_8_ROIs_2_rh_native_dil2 --l Net_8_ROIs_3_lh_native_dil2 --l
Net_8_ROIs_3_rh_native_dil2 --l Net_8_ROIs_4_lh_native_dil2 --l
Net_8_ROIs_4_rh_native_dil2 --l Net_8_ROIs_5_lh_native_dil2 --l
Net_8_ROIs_5_rh_native_dil2 --l Net_8_ROIs_6_rh_native_dil2 --l
Net_9_ROIs_1_lh_native_dil2 --l Net_9_ROIs_1_rh_native_dil2 --l
Net_9_ROIs_2_lh_native_dil2 --l Net_9_ROIs_2_rh_native_dil2 --l
Net_9_ROIs_3_lh_native_dil2 --l Net_9_ROIs_3_rh_native_dil2 --l
Net_9_ROIs_4_rh_native_dil2 --l Net_9_ROIs_5_rh_native_dil2 --l
Net_9_ROIs_6_rh_native_dil2


You might need my LUT also----See attached. --I can also send you the label
files if you need me to.

Thanks for your help!

<https://secure-web.cisco.com/1boSWkSgygsKBTYwvmGLWMabz_OiNxKVYdcNlTDAdfb2lVXPBQ0NByXnKrcNsMxbntHzj5pmpqDzxaJDfEhKsYKUWkof1xYG3VDva0mA11_vBrL3fg_kM-Pzb21DKAq6-0IpXcKwT7hWWUCzzf78Nn6sS7vYxotsxUo0RnSGzHjU8fHxq15pjmMAuYBBjoRz3EK1cVHFlDAqEi-Ww03lnyWRLD3zdSLLMUqRvg2tFRKJkSaRkOECtq74YO4aVv82qoTw7r4ONLgFiRWmZMEuifCSheLlzndUKvOHiU3QD7YlkKnh_kP2YMPeojvCrgaMY/https%3A%2F%2Fwww.avast.com%2Fsig-email%3Futm_medium%3Demail%26utm_source%3Dlink%26utm_campaign%3Dsig-email%26utm_content%3Dwebmail%26utm_term%3Dicon>
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<#DAB4FAD8-2DD7-40BB-A1B8-4E2AA1F9FDF2>

On Thu, Jun 9, 2022 at 10:33 AM Huang, Yujing <yhuan...@mgh.harvard.edu>
wrote:

> Can you provide the full command that you were having trouble? I would
> like to see if I can reproduce here.
>
>
>
> Yujing
>
>
>
> *From:* freesurfer-boun...@nmr.mgh.harvard.edu <
> freesurfer-boun...@nmr.mgh.harvard.edu> *On Behalf Of *Benjamin Deck
> *Sent:* Thursday, June 9, 2022 10:11 AM
> *To:* Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
> *Subject:* Re: [Freesurfer] vertex out of range mris_label2annot
>
>
>
> *        External Email - Use Caution        *
>
> Oh, that makes sense, as my --hemi flag is lh.
>
>
>
> However, when I run the same command with --ldir and the ctab LUT the
> --ldir flag doesn't ID any of my label files. Therefore, I have to provide
> the --l flags, otherwise it just creates an empty annotation file.
>
>
>
> Ben
>
>
>
> [image: Image removed by sender.]
> <https://secure-web.cisco.com/1Ok_bjRoSx7hgPT1plimaiPInYam-oUdGIluzUE74StkCjzWyu9CoYVWmBB51y-3670jl7ErdMSzpjEJCyx-wfSWToL9bXnJwbT0DkSdvDQNWwngpEGo0ayf1qBf_JqO9Y5WAMTA4Bw6kcPvUvFrLgTPzOofMYal-8rdk90pFpLdMqwuzJxEGtODeRCkyzxCCc5l87QSo6oiR_Lt-GVI0kdirIVWqFcp31KkNw0o2d8ZT6h_yVCIoUDGOEIuU1QDCm--uZ9-2IBXyIim0_bku2N7TFi9JaF76hSkz5GybdVY4kTrpoKkHj2GHsy81fi2O8R9QSu2URTpy1m2ya22wgA/https%3A%2F%2Fwww.avast.com%2Fsig-email%3Futm_medium%3Demail%26utm_source%3Dlink%26utm_campaign%3Dsig-email%26utm_content%3Dwebmail%26utm_term%3Dicon>
>
> Virus-free. *MailScanner has detected a possible fraud attempt from
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>
>
>
> On Thu, Jun 9, 2022 at 8:57 AM Huang, Yujing <yhuan...@mgh.harvard.edu>
> wrote:
>
> Hi Benjamin,
>
>
>
> The error indicates that a label in Net_10_ROIs_1_rh_native_dil2.label has
> vertex 254077 that is outside lh.orig.
>
>
>
> I’m wondering how you created those label files.
>
>
>
> Best,
>
>
>
> Yujing
>
>
>
>
>
>
>
>
>
> *From:* freesurfer-boun...@nmr.mgh.harvard.edu <
> freesurfer-boun...@nmr.mgh.harvard.edu> *On Behalf Of *Benjamin Deck
> *Sent:* Monday, June 6, 2022 4:06 PM
> *To:* Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
> *Subject:* [Freesurfer] vertex out of range mris_label2annot
>
>
>
> *        External Email - Use Caution        *
>
> Hi freesurfer experts,
>
>
>
> I am attempting to create a custom annotation file with the following LUT
> and call:
>
>
>
> mris_label2annot  --s sub-DAEK --hemi lh \
> --ctab sub-DAEK_yeoLUT.txt \
> --a yeo2011nodes \
> --maxstatwinner \
> --l  Net_10_ROIs_1_lh_native_dil2.label \
> --l  Net_10_ROIs_1_rh_native_dil2.label \
> --l  Net_11_ROIs_1_lh_native_dil2.label \
> --l  Net_11_ROIs_1_rh_native_dil2.label \
> --l  Net_12_ROIs_1_lh_native_dil2.label \
> --l  Net_12_ROIs_1_rh_native_dil2.label \
> --l  Net_12_ROIs_2_lh_native_dil2.label \
>
> .....many other labels
>
>
>
>
>
> LUT:
>
>
>
> 0 Unknown 0 0 0 0
> 1 Net_10_ROIs_1_lh_native 5   5   5   0
> 2 Net_10_ROIs_1_rh_native 25  5   25  0
> 3 Net_11_ROIs_1_lh_native 25  100 40  0
> 4 Net_11_ROIs_1_rh_native 70  130 180 0
> 5 Net_12_ROIs_1_lh_native 100 100 0   0
> 6 Net_12_ROIs_1_rh_native 196 58  250 0
>
> .....many others
>
>
>
> However, when I run the above command it breaks with the following issue:
>
>
>
>
>
> Reading ctab sub-DAEK_yeoLUT.txt
> Number of ctab entries 104
>
> 7.2.0
> cwd /mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels
> cmdline mris_label2annot --s sub-DAEK --hemi lh --ctab sub-DAEK_yeoLUT.txt
> --a yeo2011nodes --maxstatwinner --l Net_10_ROIs_1_lh_native_dil2.label --l
> Net_10_ROIs_1_rh_native_dil2.label --l Net_11_ROIs_1_lh_native_dil2.label
> --l Net_11_ROIs_1_rh_native_dil2.label --l
> Net_12_ROIs_1_lh_native_dil2.label --l Net_12_ROIs_1_rh_native_dil2.label
> --l Net_12_ROIs_2_lh_native_dil2.label --l
> Net_12_ROIs_2_rh_native_dil2.label --l Net_13_ROIs_1_lh_native_dil2.label
> --l Net_13_ROIs_1_rh_native_dil2.label --l
> Net_13_ROIs_2_lh_native_dil2.label --l Net_13_ROIs_2_rh_native_dil2.label
> --l Net_13_ROIs_3_lh_native_dil2.label --l
> Net_13_ROIs_3_rh_native_dil2.label --l Net_13_ROIs_4_lh_native_dil2.label
> --l Net_13_ROIs_4_rh_native_dil2.label --l
> Net_13_ROIs_5_lh_native_dil2.label --l Net_14_ROIs_1_lh_native_dil2.label
> --l Net_14_ROIs_1_rh_native_dil2.label --l
> Net_14_ROIs_2_lh_native_dil2.label --l Net_14_ROIs_2_rh_native_dil2.label
> --l Net_14_ROIs_3_lh_native_dil2.label --l
> Net_14_ROIs_3_rh_native_dil2.label --l Net_14_ROIs_4_lh_native_dil2.label
> --l Net_14_ROIs_4_rh_native_dil2.label --l
> Net_14_ROIs_5_lh_native_dil2.label --l Net_14_ROIs_5_rh_native_dil2.label
> --l Net_15_ROIs_1_lh_native_dil2.label --l
> Net_15_ROIs_1_rh_native_dil2.label --l Net_16_ROIs_1_lh_native_dil2.label
> --l Net_16_ROIs_1_rh_native_dil2.label --l
> Net_16_ROIs_2_lh_native_dil2.label --l Net_16_ROIs_2_rh_native_dil2.label
> --l Net_16_ROIs_3_rh_native_dil2.label --l
> Net_17_ROIs_1_lh_native_dil2.label --l Net_17_ROIs_1_rh_native_dil2.label
> --l Net_17_ROIs_2_lh_native_dil2.label --l
> Net_17_ROIs_2_rh_native_dil2.label --l Net_17_ROIs_3_lh_native_dil2.label
> --l Net_17_ROIs_3_rh_native_dil2.label --l
> Net_17_ROIs_4_lh_native_dil2.label --l Net_17_ROIs_4_rh_native_dil2.label
> --l Net_18_ROIs_1_lh_native_dil2.label --l
> Net_18_ROIs_1_rh_native_dil2.label --l Net_18_ROIs_2_lh_native_dil2.label
> --l Net_18_ROIs_2_rh_native_dil2.label --l
> Net_18_ROIs_3_lh_native_dil2.label --l Net_18_ROIs_3_rh_native_dil2.label
> --l Net_18_ROIs_4_lh_native_dil2.label --l
> Net_18_ROIs_4_rh_native_dil2.label --l Net_18_ROIs_5_lh_native_dil2.label
> --l Net_19_ROIs_1_lh_native_dil2.label --l
> Net_19_ROIs_1_rh_native_dil2.label --l Net_2_ROIs_1_lh_native_dil2.label
> --l Net_2_ROIs_1_rh_native_dil2.label --l Net_2_ROIs_2_lh_native_dil2.label
> --l Net_2_ROIs_2_rh_native_dil2.label --l Net_3_ROIs_1_lh_native_dil2.label
> --l Net_3_ROIs_1_rh_native_dil2.label --l Net_3_ROIs_2_lh_native_dil2.label
> --l Net_3_ROIs_2_rh_native_dil2.label --l Net_3_ROIs_3_lh_native_dil2.label
> --l Net_3_ROIs_3_rh_native_dil2.label --l Net_4_ROIs_1_lh_native_dil2.label
> --l Net_4_ROIs_1_rh_native_dil2.label --l Net_5_ROIs_1_lh_native_dil2.label
> --l Net_5_ROIs_1_rh_native_dil2.label --l Net_5_ROIs_2_lh_native_dil2.label
> --l Net_5_ROIs_2_rh_native_dil2.label --l Net_5_ROIs_3_lh_native_dil2.label
> --l Net_5_ROIs_3_rh_native_dil2.label --l Net_5_ROIs_4_lh_native_dil2.label
> --l Net_5_ROIs_4_rh_native_dil2.label --l Net_6_ROIs_1_lh_native_dil2.label
> --l Net_6_ROIs_1_rh_native_dil2.label --l Net_6_ROIs_2_lh_native_dil2.label
> --l Net_6_ROIs_2_rh_native_dil2.label --l Net_6_ROIs_3_lh_native_dil2.label
> --l Net_6_ROIs_3_rh_native_dil2.label --l Net_7_ROIs_1_lh_native_dil2.label
> --l Net_7_ROIs_1_rh_native_dil2.label --l Net_7_ROIs_2_lh_native_dil2.label
> --l Net_7_ROIs_2_rh_native_dil2.label --l Net_7_ROIs_3_rh_native_dil2.label
> --l Net_8_ROIs_1_lh_native_dil2.label --l Net_8_ROIs_1_rh_native_dil2.label
> --l Net_8_ROIs_2_lh_native_dil2.label --l Net_8_ROIs_2_rh_native_dil2.label
> --l Net_8_ROIs_3_lh_native_dil2.label --l Net_8_ROIs_3_rh_native_dil2.label
> --l Net_8_ROIs_4_lh_native_dil2.label --l Net_8_ROIs_4_rh_native_dil2.label
> --l Net_8_ROIs_5_lh_native_dil2.label --l Net_8_ROIs_5_rh_native_dil2.label
> --l Net_8_ROIs_6_rh_native_dil2.label --l Net_9_ROIs_1_lh_native_dil2.label
> --l Net_9_ROIs_1_rh_native_dil2.label --l Net_9_ROIs_2_lh_native_dil2.label
> --l Net_9_ROIs_2_rh_native_dil2.label --l Net_9_ROIs_3_lh_native_dil2.label
> --l Net_9_ROIs_3_rh_native_dil2.label --l Net_9_ROIs_4_rh_native_dil2.label
> --l Net_9_ROIs_5_rh_native_dil2.label --l Net_9_ROIs_6_rh_native_dil2.label
> sysname  Linux
> hostname LAPTOP-LPS9CH5E
> machine  x86_64
> user     bdeck8317
>
> subject sub-DAEK
> hemi    lh
> SUBJECTS_DIR /mnt/c/Users/Ben/freesurfer/subjects
> ColorTable sub-DAEK_yeoLUT.txt
> AnnotName  yeo2011nodes
> nlables 104
> LabelThresh 0 0.000000
> Loading /mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/surf/lh.orig
>  1 328965 Net_10_ROIs_1_lh_native
>  2 1639705 Net_10_ROIs_1_rh_native
>
> WARNING: vertex 210080 maps to multiple labels! (overwriting)
> WARNING: vertex 210124 maps to multiple labels! (overwriting)
> WARNING: vertex 210125 maps to multiple labels! (overwriting)
> WARNING: vertex 210151 maps to multiple labels! (overwriting)
> WARNING: vertex 210172 maps to multiple labels! (overwriting)
> WARNING: vertex 210173 maps to multiple labels! (overwriting)
> WARNING: vertex 211157 maps to multiple labels! (overwriting)
> WARNING: vertex 211158 maps to multiple labels! (overwriting)
> ERROR: Net_10_ROIs_1_rh_native_dil2.label, n=9538, vertex 254077 out of
> range
>
>
>
>
>
> Any thoughts on the fix for this issue?
>
>
>
> Thanks
>
>
>
>
>
>
> --
>
> *Benjamin L. Deck*
>
> *Doctoral Student*
>
> *Applied Cognitive and Brain Sciences*
>
> *Department of Psychological and Brain Sciences*
>
> *Drexel University*
>
>
>
> [image: Image removed by sender.]
> <https://secure-web.cisco.com/1VCP2x7hEk3S0x-5t1wZJvcOAgVvGsjI-A6YfmqQ3APzc6l7-KlXei0L6xkyOUOUX7sUGPc4fByz8ct_zhOI79-XyGGNXC2aKBSxJ2hfn5hYESJ3vthj65I6zx05jKgXFP4687MO2nwcom3j0X61SXEIuGnjeRgpwnx4wLMbxM5QKp1ma4iTQ1qsdh_Ek5LX8OLMOqS4GblAyMMXgtgeHtgIPrKg6d-ayjxgldVuD1qSbLNS76CuVbqRMqyWFrdT1eoL5xMAQshvXQiupylwEdwlcRlw2Jp-WWbY_UBCewbLdyOl1_I65udO74_E36gz5pnJPlhswTVuDidCMSbygvQ/https%3A%2F%2Fwww.avast.com%2Fsig-email%3Futm_medium%3Demail%26utm_source%3Dlink%26utm_campaign%3Dsig-email%26utm_content%3Dwebmail%26utm_term%3Dicon>
>
> Virus-free. *MailScanner has detected a possible fraud attempt from
> "secure-web.cisco.com" claiming to be* 
> http://secure-web.cisco.com/17LCc6CF3PJSPQ3LvTSW6fY8WecK3N09MQbJU_OPwJTGkwVw2tn1pj7yTulnhlVX0NwHk2xT25wLeE1CxbHnEi6PPq4AJahnr6RGZY4HpMwkrmwaRaayEpRAkG74b85xvsrT-lgr4IgDdKAtXZOoJdH1UDlYvG8Fm5soCuxM7EBTTELeuHDIP_ce_KRLKa_ngsOWpuip4JlffsWCFGvMH5qq2wiu_d3_KOWrookhLxOncKggrYD7aSdt8h8IIKNhXEd0QGQMiRu-aED6x4HGK7oKNEFlzDN8JsOofR1ZO0k-Zr4XNhSnEDPzVRltqbT9Q/http%3A%2F%2Fwww.avast.com
> <https://secure-web.cisco.com/1YnAF7HOvTmiAw4b2v-qinSbPinE1DozllhrvyX8ipXNXhb-thlmaEBmlolRCIWAfegACimXAW_BkTVSIDEEa2in3AFLQUtpfPZNTiQctfC0flTReMo9XMAvdDwIZarWtdmZbbF75Dw67966o49yj-LUBYJpWD8BI9wG2whMOLA_8GsieSCesbQ96e0ih9rwnjWfEquKQyEawtcDB9u9Zhrzqgki6oTADMpIApvSP7gqCV34UHHQ-MtRl7ihxzY7a0qMTN6g0OIJkfEIqfFoUlg3l7U_JsbnaeuUtWlkTI5NeSWicV1K1nsc8Sdup79im6SXKKd8JGvTwsx3T9ZDgEQ/https%3A%2F%2Fwww.avast.com%2Fsig-email%3Futm_medium%3Demail%26utm_source%3Dlink%26utm_campaign%3Dsig-email%26utm_content%3Dwebmail%26utm_term%3Dlink>
>
>
>
> _______________________________________________
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> *MailScanner has detected a possible fraud attempt from
> "secure-web.cisco.com" claiming to be*
> https://secure-web.cisco.com/1yxOpUgyL4v8JvRst9M9ApRKKdT1ORrzyQspvq_1AryRU_rBVg4ltYKzcZdIMk1lKA-nr-myNPaAcv87FBO43vWYHK_xg_XeIPiyht1-4s9afwZNz6dXBpvk-sGIacvyoatjqzUIKY-1PpsZ3Rx6ECHCg_u_sA3vixR6kBjAkV5hD2OYODG71OMB9j-rvPP5JD4mbbgRYc0IOhromY6069khkPL7oU3uML-qyxQ-NuFj3yf3jstO7KXHFjQFzA7w0TJagNN1fGSIviGEmi6SpgoJkVQPPA4i2LcGCxqSzy93_0xp7fXlHIZHRcj8p_UwDUdToPYTLVjF5WKSBf0O8Ig/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer
> <https://secure-web.cisco.com/1nIEbcm5JN0w3AjTDG3zcUPOiW3Y8rRZ12nK6T7C_2JYDkNXX6RP1uCyQzaRwiCrP3ynQAzc3czUMcqKzZ83QWtSAvyBcoBiRf9A5S53ivJN4Lvxm4L8MpGE1fX_tuPuxOBQWxWHnAlHbAbOOYkfGleTZwby4TSbhm9sMG6fQyBGHTDOwcpdWMkdiZ2OcjLul5DW3X1DVm0nw_z-4Xkg9MYGgAgHcvKsNfDIoTmbU7F3tgkySV_nRPd49QRYGm8hc6ntDkIWl_-HIiDKQGM3xwnqbJEmwyc33PlBL0EX3FJRrni4jnU0O6jLRV1GGukP6U2bU6CWFik5GJOSgGhCCCg/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer>
> The information in this e-mail is intended only for the person to whom it
> is addressed.  If you believe this e-mail was sent to you in error and the
> e-mail contains patient information, please contact the Mass General
> Brigham Compliance HelpLine at *MailScanner has detected a possible fraud
> attempt from "secure-web.cisco.com" claiming to be*
> https://secure-web.cisco.com/1Y3Wqpdclf9K4GN37oa69ZG_p_a9pjNJTn9DWzLluorEVeN5NugkAvvHYHMFc1BvyWASL3Th4jeNR-xwxqVjCCcxfXmgH-rAGSX4OXMt-pdFGA3PdS6sJknb05u4DIhCuaaZy2TAR5aINRJCSRsN5r_rZXP2rOo53-u2N5Oz9k9unJVe_XiAApb-e-4GPgD-gT2l0Buznrn6I6j7ferM3uMCNT60gzBDJxfhGUywAuBYdSeUPWaNDuDpfWBRLCSYY7iarkxnMA4eU0YBtTJQF56DdoVP7KNtfy09POI670KZU6dPzJ-2jIbnfCnf72dPh7-RgXouYauNBOiz3EwYOXg/https%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline
> <https://secure-web.cisco.com/15B1iqi0JT-6SIOHtJcF-w-4l7tzeCfDDifHK_effgKw7CD5WIFCHzUOXW8-siOs5A8fw2gXxg_oRBW4s38dFip1HyqIRhXK144_YJH_y_7mfZ7Q09sEENLHn8ldo2DxRSN-aJcjbcM79nCSJvvWMU6rhM3oNG41nPF3AIShKpMxExWKjp7tbCGGInd_TAKzpt1OPg2AObAMpgP4H3QVXwm3bgW_moKFusIyq0TbRz3ZKIayaEiBDvXGEspyDShLxu95u7wN5GypKQilENCZZVUdjduio5WbEHY0vtzgg-1i_wvMnhVAHAABGXVoNlh6Ze2FrxQ2CK-QFYWTW56q_PQ/https%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline>
> <*MailScanner has detected a possible fraud attempt from
> "secure-web.cisco.com" claiming to be*
> https://secure-web.cisco.com/1Y3Wqpdclf9K4GN37oa69ZG_p_a9pjNJTn9DWzLluorEVeN5NugkAvvHYHMFc1BvyWASL3Th4jeNR-xwxqVjCCcxfXmgH-rAGSX4OXMt-pdFGA3PdS6sJknb05u4DIhCuaaZy2TAR5aINRJCSRsN5r_rZXP2rOo53-u2N5Oz9k9unJVe_XiAApb-e-4GPgD-gT2l0Buznrn6I6j7ferM3uMCNT60gzBDJxfhGUywAuBYdSeUPWaNDuDpfWBRLCSYY7iarkxnMA4eU0YBtTJQF56DdoVP7KNtfy09POI670KZU6dPzJ-2jIbnfCnf72dPh7-RgXouYauNBOiz3EwYOXg/https%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline
> <https://secure-web.cisco.com/15B1iqi0JT-6SIOHtJcF-w-4l7tzeCfDDifHK_effgKw7CD5WIFCHzUOXW8-siOs5A8fw2gXxg_oRBW4s38dFip1HyqIRhXK144_YJH_y_7mfZ7Q09sEENLHn8ldo2DxRSN-aJcjbcM79nCSJvvWMU6rhM3oNG41nPF3AIShKpMxExWKjp7tbCGGInd_TAKzpt1OPg2AObAMpgP4H3QVXwm3bgW_moKFusIyq0TbRz3ZKIayaEiBDvXGEspyDShLxu95u7wN5GypKQilENCZZVUdjduio5WbEHY0vtzgg-1i_wvMnhVAHAABGXVoNlh6Ze2FrxQ2CK-QFYWTW56q_PQ/https%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline>>
> .
> Please note that this e-mail is not secure (encrypted).  If you do not
> wish to continue communication over unencrypted e-mail, please notify the
> sender of this message immediately.  Continuing to send or respond to
> e-mail after receiving this message means you understand and accept this
> risk and wish to continue to communicate over unencrypted e-mail.
>
>
>
> --
>
> *Benjamin L. Deck*
>
> *Doctoral Student*
>
> *Applied Cognitive and Brain Sciences*
>
> *Department of Psychological and Brain Sciences*
>
> *Drexel University*
> _______________________________________________
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> https://secure-web.cisco.com/1yxOpUgyL4v8JvRst9M9ApRKKdT1ORrzyQspvq_1AryRU_rBVg4ltYKzcZdIMk1lKA-nr-myNPaAcv87FBO43vWYHK_xg_XeIPiyht1-4s9afwZNz6dXBpvk-sGIacvyoatjqzUIKY-1PpsZ3Rx6ECHCg_u_sA3vixR6kBjAkV5hD2OYODG71OMB9j-rvPP5JD4mbbgRYc0IOhromY6069khkPL7oU3uML-qyxQ-NuFj3yf3jstO7KXHFjQFzA7w0TJagNN1fGSIviGEmi6SpgoJkVQPPA4i2LcGCxqSzy93_0xp7fXlHIZHRcj8p_UwDUdToPYTLVjF5WKSBf0O8Ig/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer
> The information in this e-mail is intended only for the person to whom it
> is addressed.  If you believe this e-mail was sent to you in error and the
> e-mail contains patient information, please contact the Mass General
> Brigham Compliance HelpLine at
> https://secure-web.cisco.com/1Y3Wqpdclf9K4GN37oa69ZG_p_a9pjNJTn9DWzLluorEVeN5NugkAvvHYHMFc1BvyWASL3Th4jeNR-xwxqVjCCcxfXmgH-rAGSX4OXMt-pdFGA3PdS6sJknb05u4DIhCuaaZy2TAR5aINRJCSRsN5r_rZXP2rOo53-u2N5Oz9k9unJVe_XiAApb-e-4GPgD-gT2l0Buznrn6I6j7ferM3uMCNT60gzBDJxfhGUywAuBYdSeUPWaNDuDpfWBRLCSYY7iarkxnMA4eU0YBtTJQF56DdoVP7KNtfy09POI670KZU6dPzJ-2jIbnfCnf72dPh7-RgXouYauNBOiz3EwYOXg/https%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline
>  <
> https://secure-web.cisco.com/1Y3Wqpdclf9K4GN37oa69ZG_p_a9pjNJTn9DWzLluorEVeN5NugkAvvHYHMFc1BvyWASL3Th4jeNR-xwxqVjCCcxfXmgH-rAGSX4OXMt-pdFGA3PdS6sJknb05u4DIhCuaaZy2TAR5aINRJCSRsN5r_rZXP2rOo53-u2N5Oz9k9unJVe_XiAApb-e-4GPgD-gT2l0Buznrn6I6j7ferM3uMCNT60gzBDJxfhGUywAuBYdSeUPWaNDuDpfWBRLCSYY7iarkxnMA4eU0YBtTJQF56DdoVP7KNtfy09POI670KZU6dPzJ-2jIbnfCnf72dPh7-RgXouYauNBOiz3EwYOXg/https%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline>
>  .
> Please note that this e-mail is not secure (encrypted).  If you do not
> wish to continue communication over unencrypted e-mail, please notify the
> sender of this message immediately.  Continuing to send or respond to
> e-mail after receiving this message means you understand and accept this
> risk and wish to continue to communicate over unencrypted e-mail.
>


-- 
*Benjamin L. Deck*
*Doctoral Student*
*Applied Cognitive and Brain Sciences*
*Department of Psychological and Brain Sciences*
*Drexel University*
0 Unknown                         0   0   0   0
1 Net_10_ROIs_1_lh_native_dil2    0   0   0   0
2 Net_10_ROIs_1_rh_native_dil2   25   5  25   0
3 Net_11_ROIs_1_lh_native_dil2   25 100  40   0
4 Net_11_ROIs_1_rh_native_dil2   70 130 180   0
5 Net_12_ROIs_1_lh_native_dil2  100 100   0   0
6 Net_12_ROIs_1_rh_native_dil2 196 58  250 0
7 Net_12_ROIs_2_lh_native_dil2 100 25  0   0
8 Net_12_ROIs_2_rh_native_dil2 120 70  50  0
9 Net_13_ROIs_1_lh_native_dil2 220 20  10  0
10 Net_13_ROIs_1_rh_native_dil2 220 20  100 0
11 Net_13_ROIs_2_lh_native_dil2 180 40  120 0
12 Net_13_ROIs_2_rh_native_dil2 122 186 220 0
13 Net_13_ROIs_3_lh_native_dil2 140 20  140 0
14 Net_13_ROIs_3_rh_native_dil2 12  48  0 0
15 Net_13_ROIs_4_lh_native_dil2 20  30  140 0
16 Net_13_ROIs_4_rh_native_dil2 35  75  50  0
17 Net_13_ROIs_5_lh_native_dil2 225 140 140 0
18 Net_14_ROIs_1_lh_native_dil2 200 35  75  0
19 Net_14_ROIs_1_rh_native_dil2 160 100 50  0
20 Net_14_ROIs_2_lh_native_dil2 20  220 60  0
21 Net_14_ROIs_2_rh_native_dil2 60  220 60  0
22 Net_14_ROIs_3_lh_native_dil2 60  58  210 0
23 Net_14_ROIs_3_rh_native_dil2 220 180 140 0
24 Net_14_ROIs_4_lh_native_dil2 20  100 50  0
25 Net_14_ROIs_4_rh_native_dil2 45  70  50  0
26 Net_14_ROIs_5_lh_native_dil2 90  100 220 0
27 Net_14_ROIs_5_rh_native_dil2 40  100 160 0
28 Net_15_ROIs_1_lh_native_dil2 0   0 127 0
29 Net_15_ROIs_1_rh_native_dil2 220 60  20  0
30 Net_16_ROIs_1_lh_native_dil2 120 100 60  0
31 Net_16_ROIs_1_rh_native_dil2 220 20  20  0
32 Net_16_ROIs_2_lh_native_dil2 220 180 220 0
33 Net_16_ROIs_2_rh_native_dil2 0   0 127 0
34 Net_16_ROIs_3_rh_native_dil2 180 40  120 0
35 Net_17_ROIs_1_lh_native_dil2 140 20  140 0
36 Net_17_ROIs_1_rh_native_dil2 51  50  135 0
37 Net_17_ROIs_2_lh_native_dil2 20  30  140 0
38 Net_17_ROIs_2_rh_native_dil2 35  75  50  0
39 Net_17_ROIs_3_lh_native_dil2 225 140 140 0
40 Net_17_ROIs_3_rh_native_dil2 200 35  75  0
41 Net_17_ROIs_4_lh_native_dil2 160 100 50  0
42 Net_17_ROIs_4_rh_native_dil2 20  220 60  0
43 Net_18_ROIs_1_lh_native_dil2 60  220 60  0
44 Net_18_ROIs_1_rh_native_dil2 220 180 140 0
45 Net_18_ROIs_2_lh_native_dil2 20  100 50  0
46 Net_18_ROIs_2_rh_native_dil2 220 100 50  0
47 Net_18_ROIs_3_lh_native_dil2 220 248 164 0
48 Net_18_ROIs_3_rh_native_dil2 220 60  40  0
49 Net_18_ROIs_4_lh_native_dil2 220 60  20  0
50 Net_18_ROIs_4_rh_native_dil2 120 100 60  0
51 Net_18_ROIs_5_lh_native_dil2 220 20  20  0
52 Net_19_ROIs_1_lh_native_dil2 220 180 220 0
53 Net_19_ROIs_1_rh_native_dil2 60  20  220 0
54 Net_2_ROIs_1_lh_native_dil2 160 140 180 0
55 Net_2_ROIs_1_rh_native_dil2 80  20  140 0
56 Net_2_ROIs_2_lh_native_dil2 75  50  125 0
57 Net_2_ROIs_2_rh_native_dil2 20  220 160 0
58 Net_3_ROIs_1_lh_native_dil2 20  220 140 0
59 Net_3_ROIs_1_rh_native_dil2 20  180 140 0
60 Net_3_ROIs_2_lh_native_dil2 140 220 220 0
61 Net_3_ROIs_2_rh_native_dil2 165 42  42  0
62 Net_3_ROIs_3_lh_native_dil2 80  160 20  0
63 Net_3_ROIs_3_rh_native_dil2 160 32  240 0
64 Net_4_ROIs_1_lh_native_dil2 100 0   100 0
65 Net_4_ROIs_1_rh_native_dil2 70  20  170 0
66 Net_5_ROIs_1_lh_native_dil2 150 150 200 0
67 Net_5_ROIs_1_rh_native_dil2 122 135 50  0
68 Net_5_ROIs_2_lh_native_dil2 0 192 32  0
69 Net_5_ROIs_2_rh_native_dil2 115 145 90  0
70 Net_5_ROIs_3_lh_native_dil2 125 100 10  0
71 Net_5_ROIs_3_rh_native_dil2 20  90  0   0
72 Net_5_ROIs_4_lh_native_dil2 0   100 60  0
73 Net_5_ROIs_4_rh_native_dil2 122 135 50  0
74 Net_6_ROIs_1_lh_native_dil2 80  40  20  0
75 Net_6_ROIs_1_rh_native_dil2 122 0   50  0
76 Net_6_ROIs_2_lh_native_dil2 100 135 100 0
77 Net_6_ROIs_2_rh_native_dil2 0   100 60  0
78 Net_6_ROIs_3_lh_native_dil2 196 196 0   0
79 Net_6_ROIs_3_rh_native_dil2 196 196 40  0
80 Net_7_ROIs_1_lh_native_dil2 196 100 60  0
81 Net_7_ROIs_1_rh_native_dil2 196 40  100 0
82 Net_7_ROIs_2_lh_native_dil2 196 50  60  0
83 Net_7_ROIs_2_rh_native_dil2 10  80  200 0
84 Net_7_ROIs_3_rh_native_dil2 80  200 100 0
85 Net_8_ROIs_1_lh_native_dil2 100 100 40  0
86 Net_8_ROIs_1_rh_native_dil2 200 20  60  0
87 Net_8_ROIs_2_lh_native_dil2 10  40  10  0
88 Net_8_ROIs_2_rh_native_dil2 196 196 0   0
89 Net_8_ROIs_3_lh_native_dil2 30  200 10  0
90 Net_8_ROIs_3_rh_native_dil2 0   100 90  0
91 Net_8_ROIs_4_lh_native_dil2 0   100 100 0
92 Net_8_ROIs_4_rh_native_dil2 0   128 0   0
93 Net_8_ROIs_5_lh_native_dil2 0   100 0   0
94 Net_8_ROIs_5_rh_native_dil2 60  40  200 0
95 Net_8_ROIs_6_rh_native_dil2 10  80  100 0
96 Net_9_ROIs_1_lh_native_dil2 0   200 0   0
97 Net_9_ROIs_1_rh_native_dil2 128 32  0 0
98 Net_9_ROIs_2_lh_native_dil2 150 100 0 0
99 Net_9_ROIs_2_rh_native_dil2 10  100  20 0
100 Net_9_ROIs_3_lh_native_dil2 140 100  0  0
101 Net_9_ROIs_3_rh_native_dil2 0   200  60 0
102 Net_9_ROIs_4_rh_native_dil2 120 120 120 0
103 Net_9_ROIs_5_rh_native_dil2 120  0  100 0
_______________________________________________
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The information in this e-mail is intended only for the person to whom it is 
addressed.  If you believe this e-mail was sent to you in error and the e-mail 
contains patient information, please contact the Mass General Brigham 
Compliance HelpLine at https://www.massgeneralbrigham.org/complianceline 
<https://www.massgeneralbrigham.org/complianceline> .
Please note that this e-mail is not secure (encrypted).  If you do not wish to 
continue communication over unencrypted e-mail, please notify the sender of 
this message immediately.  Continuing to send or respond to e-mail after 
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