External Email - Use Caution Hello again,
Could you reach the files? Best, Batuhan On Wed, Nov 21, 2018 at 8:01 PM Batuhan Erkat <o.batuhaner...@gmail.com> wrote: > Hi Bram, > > I uploaded all the files, including my input image and recon-all scripts. > As you can see, there are no errors for mri_convert, but there is for > mghRead(). If you inspect the 001.mgz and rawavg.mgz files, you'll realize > that they are corrupted and probably that's why mghRead fails to read > rawavg.mgz. > > Can you see the files, did I do the file transmission correctly? > > Best, > Batuhan > > On Wed, Nov 21, 2018 at 7:32 PM Diamond, Bram Ryder < > brdiam...@mgh.harvard.edu> wrote: > >> Hi Batuhan, >> >> Can you please upload the BE2 subject data using our ftp file >> exchange and let me know the exact command and terminal output when you ran >> mri_convert? >> >> Info on our ftp file exchange: >> https://surfer.nmr.mgh.harvard.edu/fswiki/FtpFileExchange >> >> Thanks, >> Bram >> >> >> *Bram R. Diamond, BSc* >> Research Technician II >> Laboratory for Computational Neuroimaging >> Martinos Center for Biomedical Imaging >> Massachusetts General Hospital >> 149 13th Street >> Charlestown, MA 02129 >> (p): 617-726-6598 >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > -- > > MSc Candidate > > Neuroscience Graduate Program > National Magnetic Resonance Research Center (UMRAM) & > Aysel Sabuncu Brain Research Center > > Bilkent University > Ankara, 06800 > Turkey > > -- MSc Candidate Neuroscience Graduate Program National Magnetic Resonance Research Center (UMRAM) & Aysel Sabuncu Brain Research Center Bilkent University Ankara, 06800 Turkey
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