External Email - Use Caution Here it is: mri_glmfit-sim --glmdir PEP-HC_Gender_Age.txt.lh.area.mgh.5.mgh.cortex.glmdir --sim-sign abs --cache 1.3 abs
On Mon, May 14, 2018 at 6:59 PM, Douglas N. Greve <dgr...@mgh.harvard.edu> wrote: > sorry, one more thing. Can you send your mri_glmfit-sim command line? > > > On 05/14/2018 05:46 PM, Pedro Rosa wrote: > > > > > > Hi, Doug. Many thanks. > > Find the fsgd and the contrast attached, as well as the cluster > > summary and the individual-based cluster data (which I used to > > calculate the groups' means). The cluster I referred to is the second > > one (medialorbitofrontal). > > I investigated differences in cortical area from groups 1 and 2 in > > contrast to groups 3 and 4 (contrast 3 as in > > https://surfer.nmr.mgh.harvard.edu/fswiki/Fsgdf4G1V). > > Best, > > Pedro Rosa. > > > > On Mon, May 14, 2018 at 5:42 PM, Douglas N. Greve > > <dgr...@mgh.harvard.edu <mailto:dgr...@mgh.harvard.edu>> wrote: > > > > Can you send your fsgd file and contrasts? > > > > > > On 05/14/2018 01:25 PM, Pedro Rosa wrote: > > > > > > > > > Dear FreeSurfers, > > > I got results from a cortical area analysis that intrigued me: Upon > > > the inspection of clusters that survived Monte-Carlo simulation, I > > > found a cluster with larger area among a first group in contrast > > to a > > > second group. > > > However, when I calculated the cortical areas means from that > > cluster > > > (as available in the glmdir), the second group had values slightly > > > larger than the first group (i.e., showing a difference in the > > > opposite direction). > > > How would you explain such findings? Must I have committed a > > mistake > > > in the analysis or its interpretation? > > > Best, > > > Pedro Rosa - University of São Paulo - Brazil. > > > > > > > > > _______________________________________________ > > > Freesurfer mailing list > > > Freesurfer@nmr.mgh.harvard.edu > > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> > > > > _______________________________________________ > > Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu <mailto:freesur...@nmr.mgh. > harvard.edu> > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> > > > > > > The information in this e-mail is intended only for the person to > > whom it is > > addressed. If you believe this e-mail was sent to you in error and > > the e-mail > > contains patient information, please contact the Partners > > Compliance HelpLine at > > http://www.partners.org/complianceline > > <http://www.partners.org/complianceline> . If the e-mail was sent > > to you in error > > but does not contain patient information, please contact the > > sender and properly > > dispose of the e-mail. > > > > > > > > > > _______________________________________________ > > Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
