Hi Doug, Yes the quoted lines were output fromt her terminal.
ls -l brain.mgz > -rwxrwx--- 1 myuser myuser 1216430 May 18 17:06 brain.mgz > I have many Tb of disk space. I can chmod 777 the files and still seg faults. Thanks Josh - Joshua Lee, Ph.D. Post-Doctoral Researcher MIND Institute University of California, Davis 530.747.3805 On Thu, Jun 2, 2016 at 12:13 PM, Douglas N Greve <gr...@nmr.mgh.harvard.edu> wrote: > Can you send the full terminal output? Or is that it? Do you have enough > disc space or is it running out? what is the result of > ls -l brain.mgz > > > > On 06/02/2016 03:07 PM, Joshua Lee wrote: > > On freesurfer-Linux-centos4_x86_64-stable-pub-v5.1.0 installed on > > Ubuntu 16.04 LTS > > mri_convert is seg faulting > > > > > > >>ls brain* > > brain.finalsurfs.mgz brainmask.auto.mgz brainmask.mgz brain.mgz > > > > mri_convert ./brain.mgz --in_type mgz --out_type nii -o ./brain.nii > > > > $Id: mri_convert.c,v 1.179.2.2 2011/05/16 20:53:47 greve Exp $ > > reading from ./brain.mgz... > > Segmentation fault (core dumped) > > > > > > Any ideas? > > > > Thanks > > > > Joshua > > > > > > > > _______________________________________________ > > Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > -- > Douglas N. Greve, Ph.D. > MGH-NMR Center > gr...@nmr.mgh.harvard.edu > Phone Number: 617-724-2358 > Fax: 617-726-7422 > > Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 > www.nmr.mgh.harvard.edu/facility/filedrop/index.html > Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > >
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