no, seems to be plenty left.. 240 TB
On Wednesday, August 26, 2015 12:23 PM, Bruce Fischl
<fis...@nmr.mgh.harvard.edu> wrote:
they are empty (zero size). Maybe your disk filled up?
On Wed, 26 Aug 2015, Cat Chong wrote:
> Hi Bruce,
>
> Yes, they exist.
> but this seems strange...
> -rwx------+ 1 mxx MF\Domain Users 0 Aug 26 09:12 T1.mgz
> -rwx------+ 1 mxx MF\Domain Users 0 Aug 26 09:12 wm.mgz
> -rwx------+ 1 mxx MF\Domain Users 0 Aug 26 09:12 brainmask.mgz
>
>
>
> On Wednesday, August 26, 2015 12:04 PM, Bruce Fischl
> <fis...@nmr.mgh.harvard.edu> wrote:
>
>
> Hi Cat
>
> do those file exist? What does ls -l tell you for them?
> Bruce
>
> On Wed, 26 Aug 2015, Cat Chong wrote:
>
> > Dear Experts,
> >
> > I am trying to use Freeview to view volumes using the command listed on
> the
> > website: http://freesurfer.net/fswiki/FsTutorial/OutputData_freeview but
> the
> > only volume that loads is the aseg. I am not able to load the T1, wm, or
> > brainmask mgz’s . either from the terminal or through the FreeView gui.
> >
> > I am using Freesurfer 5.3 and have downloaded XQuarz on a Mac OSX Lion
> > 10.7.5 workstation.
> > Below is the command I am using and the terminal output. I would very much
> > appreciate any help or insight.
> > cheers,
> > cat
> >
> > Below is my command:
> >
> > freeview -v \
> > C1023_out/mri/T1.mgz \
> > C1023_out/mri/wm.mgz \
> > C1023_out/mri/brainmask.mgz \
> > C1023_out/mri/aseg.mgz:colormap=lut:opacity=0.2 \
> > -f C1023_out/surf/lh.white:edgecolor=blue \
> > C1023_out/surf/lh.pial:edgecolor=red \
> > C1023_out/surf/rh.white:edgecolor=blue \
> > C1023_out/surf/rh.pial:edgecolor=red
> >
> >
> > Terminal error:
> >
> > Freeview[4393:703] invalid drawable
> > Freeview[4393:703] invalid drawable
> > Freeview[4393:703] invalid drawable
> > Freeview[4393:703] invalid drawable
> > Freeview[4393:703] invalid drawable
> > Freeview[4393:703] invalid drawable
> > Freeview[4393:703] invalid drawable
> > Freeview[4393:703] invalid drawable
> > mghRead(/Volumes/home/Documents/xx/C1023_out/mri/T1.mgz, -1): read error
> > mghRead(/Volumes/home/Documents/xx /C1023_out/mri/T1.mgz, -1): read error
> > MRIread failed: Unable to read from /Volumes/home/Documents/xx
> > /C1023_out/mri/T1.mgz
> > mghRead(/Volumes/home/Documents/xx /C1023_out/mri/wm.mgz, -1): read error
> > MRIread failed: Unable to read from /Volumes/home/Documents/xx
> > /C1023_out/mri/wm.mgz
> > mghRead(/Volumes/home/Documents/xx /C1023_out/mri/wm.mgz, -1): read error
> > mghRead(/Volumes/home/Documents/xx/C1023_out/mri/brainmask.mgz, -1): read
> > error
> >
> >
> > MRIread failed: Unable to read from
> > /Volumes/home/Documents/xx/C1023_out/mri/brainmask.mgz
> > mghRead(/Volumes/home/Documents/xx/C1023_out/mri/brainmask.mgz, -1): read
> > error
> >
> >
> >
>
> _______________________________________________
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>
>
> The information in this e-mail is intended only for the person to whom it is
> addressed. If you believe this e-mail was sent to you in error and the
> e-mail
> contains patient information, please contact the Partners Compliance
> HelpLine at
> http://www.partners.org/complianceline . If the e-mail was sent to you in
> error
> but does not contain patient information, please contact the sender and
> properly
> dispose of the e-mail.
>
>
>
>
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.
