Hi Andre
if you ran recon-all you will have created a volume file names aseg.mgz
that has the subcortical segmentation (and an aparc+aseg.mgz that has
both subcortical and cortical in it)
cheers
Bruce
On Thu, 26 Feb 2015, André Schmidt
wrote:
Dear experts,
I use recon-all for the parcellation of my MPRAGE. As far as I can see this
procedure does not address subcortical regions - right? How can I
additionally perform a parcellation of subcortical regions?
Many thanks for your help
Andre
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